RNA–Protein interactions for RNA: ENSMUST00000102823.9

Ttc39b-203, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ttc39b, Length 8,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-203ENSMUST00000102823 Pdzrn3Q69ZS0 1063 aa10.84□□□□□ -0.67
Ttc39b-203ENSMUST00000102823 RgmbQ7TQ33 436 aa10.84□□□□□ -0.67
Ttc39b-203ENSMUST00000102823 Dbndd1Q9CZ00 160 aa10.84□□□□□ -0.67
Ttc39b-203ENSMUST00000102823 Pdia3P27773 505 aaKnown RBP10.84□□□□□ -0.67
Ttc39b-203ENSMUST00000102823 Babam1Q3UI43 333 aa10.84□□□□□ -0.67
Ttc39b-203ENSMUST00000102823 Ccdc189Q6NZQ0 333 aa10.84□□□□□ -0.67
Ttc39b-203ENSMUST00000102823 Slc17a8Q8BFU8 601 aa10.84□□□□□ -0.67
Ttc39b-203ENSMUST00000102823 Map9Q3TRR0 646 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Cep63Q3UPP8 700 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Ranbp6Q8BIV3 1105 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Abcc10Q8R4P9 1501 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 NefhP19246 1090 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Cnga2Q62398 664 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Pram1Q6BCL1 675 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Rab3gap1Q80UJ7 981 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Ddx17Q501J6 650 aaKnown RBP10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Adarb2Q9JI20 745 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Disp3A3KFU9 1347 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Lcmt1A0A0U1RNF2 332 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Abcf1Q6P542 837 aaKnown RBP10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Pa2g4P50580 394 aaKnown RBP10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Gigyf1Q99MR1 1044 aaKnown RBP10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Mipol1Q9D9F8 279 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Lmtk3Q5XJV6 1424 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Prdm2A2A7B5 1709 aaKnown RBP10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 1700006A11RikB9EHI3 544 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Ehd4Q9EQP2 541 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Mdm2P23804 489 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Msl1Q6PDM1 616 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Sh3d21Q7TSG5 549 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 U2af1l4Q8BGJ9 220 aa10.83□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Arid4aF8VPQ2 1261 aaKnown RBP10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Hmgb1P63158 215 aaKnown RBP10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 AbraQ8BUZ1 375 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 TxlnaQ6PAM1 554 aaKnown RBP10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Azi2Q9QYP6 405 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Tnip1Q9WUU8 647 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Abca8aQ8K442 1620 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Slc35g1Q8BY79 368 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Kif2cQ922S8 721 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Cfap70D3YVL2 1141 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Amhr2Q8K592 568 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Baiap2l1Q9DBJ3 514 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Apol10bG3X9K7 334 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Efhd1Q9D4J1 240 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Ak2Q9WTP6 239 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Ivns1abpQ920Q8 642 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Calml3Q9D6P8 149 aa10.82□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Slu7Q8BHJ9 585 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Setdb1O88974 1307 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Mx2Q9WVP9 655 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Fdx1P46656 188 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 DymQ8CHY3 669 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Pik3ap1Q9EQ32 811 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Tacc2Q9JJG0 1149 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Tex2Q6ZPJ0 1128 aaKnown RBP10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Cc2d1bQ8BRN9 848 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Lmod1Q8BVA4 595 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Epb41l2O70318 988 aaKnown RBP10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 MarcksP26645 309 aaKnown RBP10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 WaslQ91YD9 501 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Homer1Q9Z2Y3 366 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Lamb3Q61087 1168 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Rufy3Q9D394 469 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Eid1Q9DCR4 169 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Tmc2Q8R4P4 888 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 RestQ8VIG1 1082 aa10.81□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Ssh1Q76I79 1042 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Ccdc113Q8C5T8 377 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Eddm13E9Q7F5 164 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Pcdh10E9PXQ7 1057 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Mex3cQ05A36 652 aaKnown RBP10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Mst1rQ62190 1378 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Sdc2P43407 202 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Plcb3P51432 1234 aaKnown RBP10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Kiaa1211Q5PR69 1207 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Zcwpw1Q6IR42 630 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Ifih1Q8R5F7 1025 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Trmt44Q9D2Q2 713 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Prr5lA2AVJ5 370 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 PrimpolQ6P1E7 537 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Znf653Q6YND2 615 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Plcd3Q8K2J0 785 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Cacna1bO55017 2327 aa10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Gnl2Q99LH1 728 aaKnown RBP10.8□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Pde8bE9Q4S1 865 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Gm4340L7N2C4 268 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Phf14Q9D4H9 881 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Cabp5Q9JLK3 173 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Terf2O35144 541 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Krt18P05784 423 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Mx1P09922 631 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Cps1Q8C196 1500 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 A0A1W2P6Q8 802 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Gm9048A0A1W2P7H4 802 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 A0A1W2P7Z8 802 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Gm9046A0A1W2P855 802 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 NyxP83503 476 aa10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 Parp1P11103 1013 aaKnown RBP10.79□□□□□ -0.68
Ttc39b-203ENSMUST00000102823 AsnsQ61024 561 aa10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms