RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Ush1cQ9ES64 910 aa18.98■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Prl3d1P18121 224 aa18.98■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Ubash3aQ3V3E1 624 aa18.98■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Rps6ka4Q9Z2B9 773 aa18.98■□□□□ 0.63
Ubp1-202ENSMUST00000084885 MycbpapQ5SUV2 932 aa18.98■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Znf496Q5SXI5 585 aa18.98■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Kri1Q8VDQ9 704 aaKnown RBP18.98■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Cdc45Q9Z1X9 566 aa18.98■□□□□ 0.63
Ubp1-202ENSMUST00000084885 MeiocA2AG06 965 aa18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 LyarQ08288 388 aaKnown RBP18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Kiaa0319lQ8K135 1048 aa18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 A0A1W2P7S8 802 aa18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Cdc5lQ6A068 802 aaKnown RBP18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Rbm15bQ6PHZ5 887 aaKnown RBP18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Uba5Q8VE47 403 aa18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Glipr1l2Q9CQ35 332 aa18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Osbpl5Q9ER64 874 aa18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Cyp2ab1S4R196 498 aa18.97■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Topaz1E5FYH1 1653 aa18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Mst1rQ62190 1378 aa18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Ift57Q8BXG3 429 aa18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Stn1Q8K2X3 378 aa18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Trim29Q8R2Q0 587 aa18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Becn1O88597 448 aa18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 B4galnt4Q766D5 1034 aa18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Iqca1Q9CUL5 857 aa18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Mybbp1aQ7TPV4 1344 aaKnown RBP18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Ppp4r3bQ922R5 820 aa18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Mrpl44Q9CY73 333 aaKnown RBP18.96■□□□□ 0.63
Ubp1-202ENSMUST00000084885 Arhgap33Q80YF9 1305 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Gm4340L7N2C4 268 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Hoxa7P02830 229 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Slc4a1P04919 929 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Sgsm2Q80U12 1005 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Ppp1r10Q80W00 888 aaKnown RBP18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Me3Q8BMF3 604 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Tubb6Q922F4 447 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Cep89Q9CZX2 791 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Rnf41Q8BH75 317 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Pcdhb5Q91XZ5 792 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Ttc5Q99LG4 440 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Sept12Q9D451 317 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Phf14Q9D4H9 881 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Pnpla7A2AJ88 1352 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Nphp3Q7TNH6 1325 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 NppbP40753 121 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Ndufa8Q9DCJ5 172 aa18.95■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Vgll3P85442 326 aa18.94■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Gm30191A0A0U1RNT7 187 aa18.94■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Ces1aE9PYP1 563 aa18.94■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Nxf7Q80SZ6 620 aaKnown RBP18.94■□□□□ 0.62
Ubp1-202ENSMUST00000084885 StrbpQ91WM1 672 aaKnown RBP18.94■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Dph6Q9CQ28 267 aa18.94■□□□□ 0.62
Ubp1-202ENSMUST00000084885 RabggtaQ9JHK4 567 aa18.94■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Camta1A2A891 1682 aa18.93■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Pcdhb9E9Q5G2 828 aa18.93■□□□□ 0.62
Ubp1-202ENSMUST00000084885 GabrdP22933 449 aa18.93■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Cdkl5Q3UTQ8 938 aa18.93■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Krt24A1L317 512 aa18.93■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Prr16A3KMN5 304 aa18.93■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Ube4aE9Q735 1028 aa18.93■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Zfp91Q62511 572 aa18.93■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Tubgcp6G5E8P0 1769 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Tuft1O08970 390 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Usp53P15975 1069 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Mroh6V9GX81 722 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Gm45015A0A140LII9 184 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Gm18336A0A140LIU8 765 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Cyp3a57D3YYZ0 503 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Gabpb2P81069 414 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Col16a1Q8BLX7 1580 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Slc39a11Q8BWY7 342 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Ehd4Q9EQP2 541 aa18.92■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Lipo1J3QME6 396 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 CtcfQ61164 736 aaKnown RBP18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Frmd3Q8BHD4 595 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 DlatQ8BMF4 642 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Ankrd13aQ80UP5 588 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 HlfQ8BW74 295 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Mb21d2Q8C525 428 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 SdsQ8VBT2 327 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Sept1P42209 366 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Chrna5Q2MKA5 467 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Atp1a3Q6PIC6 1013 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Foxo4Q9WVH3 505 aa18.91■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Msh6P54276 1358 aaKnown RBP18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Gm973E9Q295 1059 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Copb2O55029 905 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Kcnj14Q8JZN3 434 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Kdm4cQ8VCD7 1054 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Ces1dQ8VCT4 565 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Terf2ipQ91VL8 393 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Clip2Q9Z0H8 1047 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Chd2E9PZM4 1827 aaKnown RBP18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Prr29B1ARI9 187 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Zscan29E9Q5B4 869 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Nfil3O08750 462 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Cacnb3P54285 484 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 Prkg1P0C605 671 aa18.9■□□□□ 0.62
Ubp1-202ENSMUST00000084885 NfixP70257 488 aa18.9■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms