RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SLC33A1O00400 549 aaPredicted RBP9.23□□□□□ -0.93
HDLBP-242ENST00000488013 MFNGO00587 321 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 TMPRSS2O15393 492 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 SOCS1O15524 211 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 NDUFB3O43676 98 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 CD3GP09693 182 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 SLC25A16P16260 332 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 DUSP1P28562 367 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 ERP29P30040 261 aaKnown RBP9.23□□□□□ -0.93
HDLBP-242ENST00000488013 SNU13P55769 128 aaKnown RBP9.23□□□□□ -0.93
HDLBP-242ENST00000488013 TMEM50BP56557 158 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 GNG2P59768 71 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 COL10A1Q03692 680 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 ARFRP1Q13795 201 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 OR8H2Q8N162 312 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 CD177Q8N6Q3 437 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 ASCC1Q8N9N2 400 aaKnown RBP9.23□□□□□ -0.93
HDLBP-242ENST00000488013 SUMF2Q8NBJ7 301 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 OR8B3Q8NGG8 313 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 FCAMRQ8WWV6 532 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 DEDD2Q8WXF8 326 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 ST8SIA4Q92187 359 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 RAB39BQ96DA2 213 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 PERPQ96FX8 193 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 ARHGAP5-AS1Q96IT6 56 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 DMRTB1Q96MA1 342 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 OR8B2Q96RD0 313 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 TMEM246Q9BRR3 403 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 NICN1Q9BSH3 213 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 CCDC32Q9BV29 185 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 PECRQ9BY49 303 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 LIME1Q9H400 295 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 KCNK15Q9H427 330 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 C12orf4Q9NQ89 552 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 TAS2R8Q9NYW2 309 aa9.23□□□□□ -0.93
HDLBP-242ENST00000488013 IGHV3OR15-7A0A075B7D8 119 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 TRBV23-1A0A0A0MS06 115 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 A0A0A6YYD4 124 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 A0A1W2PPH5 198 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 TMEM30CPA0ZSE6 113 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 LYNX1G3V0Z9 82 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 GABARAPH6UMI1 98 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 SIRPB1O00241 398 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 TNFRSF13BO14836 293 aaPredicted RBP9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ADAM20O43506 726 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 NDUFS7O75251 213 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ZNF737O75373 536 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ECDO95905 644 aaPredicted RBP9.22□□□□□ -0.93
HDLBP-242ENST00000488013 HLA-DQB1P01920 261 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 GYPAP02724 150 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 TK1P04183 234 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 LPLP06858 475 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 LYNX1P0DP58 116 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 DTYMKP23919 212 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 PPP5CP53041 499 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 KRTAP10-9P60411 292 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ACTBP60709 375 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ACTG1P63261 375 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 PLA2G7Q13093 441 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 GRK1Q15835 563 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 SRSF7Q16629 238 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ZNF260Q3ZCT1 412 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 PYDC2Q56P42 97 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 PLAC9Q5JTB6 97 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 FAM201AQ5SY85 155 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 CD276Q5ZPR3 534 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 SIGIRRQ6IA17 410 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 SLC35E4Q6ICL7 350 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 GDPD3Q7L5L3 318 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 MOB1BQ7L9L4 216 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ZNF554Q86TJ5 538 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 BATF2Q8N1L9 274 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ZNF525Q8N782 197 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 OR5T2Q8NGG2 359 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 C10orf105Q8TEF2 133 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 NEIL1Q96FI4 390 aaPredicted RBP9.22□□□□□ -0.93
HDLBP-242ENST00000488013 CMSS1Q9BQ75 279 aaKnown RBP9.22□□□□□ -0.93
HDLBP-242ENST00000488013 AKIP1Q9NQ31 210 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ETAA1Q9NY74 926 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 ZNF107Q9UII5 783 aaPredicted RBP9.22□□□□□ -0.93
HDLBP-242ENST00000488013 SPG11Q96JI7 2443 aa9.22□□□□□ -0.93
HDLBP-242ENST00000488013 TRBV6-6A0A0A6YYG2 114 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 A0A0G2JMP0 313 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 A0A0X1KG70 313 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 CEACAM18A8MTB9 384 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 GSTZ1O43708 216 aaPredicted RBP9.21□□□□□ -0.94
HDLBP-242ENST00000488013 RBBP9O75884 186 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 LY6HO94772 140 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 GSTT2BP0CG30 244 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 RPS2P15880 293 aaKnown RBP9.21□□□□□ -0.94
HDLBP-242ENST00000488013 GNB3P16520 340 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 AP3S2P59780 193 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 MEF2CQ06413 473 aaPredicted RBP9.21□□□□□ -0.94
HDLBP-242ENST00000488013 CLEC12BQ2HXU8 276 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 MOGAT2Q3SYC2 334 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 TRAT1Q6PIZ9 186 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 DNM1P46Q6ZS02 220 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 C6orf201Q7Z4U5 140 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 TGIF2LYQ8IUE0 185 aa9.21□□□□□ -0.94
HDLBP-242ENST00000488013 SNX29P2Q8IUI4 249 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms