RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 RAB1BQ9H0U4 201 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 PPA2Q9H2U2 334 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 DNAJB11Q9UBS4 358 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 ZNF230Q9UIE0 474 aaPredicted RBP12.16□□□□□ -0.46
LRIF1-202ENST00000485275 ANAPC10Q9UM13 185 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 PLEKHA6Q9Y2H5 1048 aa12.16□□□□□ -0.46
LRIF1-202ENST00000485275 ASH1LQ9NR48 2969 aaKnown RBP12.16□□□□□ -0.46
LRIF1-202ENST00000485275 IGKV1D-8A0A087WSZ0 117 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 OOEPA6NGQ2 149 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 DEGS1O15121 323 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 ZNF737O75373 536 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 FCN3O75636 299 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 LMO1P25800 156 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 GNG2P59768 71 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 COL10A1Q03692 680 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 TRIQKQ629K1 86 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 C20orf204Q6ZNR8 217 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 C15orf40Q8WUR7 153 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 HPS1Q92902 700 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 SHARPINQ9H0F6 387 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 SCPEP1Q9HB40 452 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 MAB21L2Q9Y586 359 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 LRRC30A6NM36 301 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 SULT1C2O00338 296 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 GYPAP02724 150 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 IRF2P14316 349 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 PRDX2P32119 198 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 OR3A1P47881 315 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 ARFRP1Q13795 201 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 ATXN7L3Q14CW9 347 aaPredicted RBP12.15□□□□□ -0.46
LRIF1-202ENST00000485275 ZMYND11Q15326 602 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 OR52W1Q6IF63 320 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 FAAP20Q6NZ36 180 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 C5orf24Q7Z6I8 188 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 OR4S1Q8NGB4 309 aa12.15□□□□□ -0.46
LRIF1-202ENST00000485275 ANKRD20A5PA0PJZ0 165 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 SH2D1BO14796 132 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 CA11O75493 328 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 PAN3Q58A45 887 aaKnown RBP12.14□□□□□ -0.47
LRIF1-202ENST00000485275 FIP1L1Q6UN15 594 aaKnown RBP12.14□□□□□ -0.47
LRIF1-202ENST00000485275 FGFRL1Q8N441 504 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 FAM216BQ8N7L0 139 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 ZNRF1Q8ND25 227 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 OR4D10Q8NGI6 311 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 C14orf79Q96F83 325 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 GAFA1Q96PS6 74 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 C11orf54Q9H0W9 315 aaPredicted RBP12.14□□□□□ -0.47
LRIF1-202ENST00000485275 FBXO9Q9UK97 447 aaPredicted RBP12.14□□□□□ -0.47
LRIF1-202ENST00000485275 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
LRIF1-202ENST00000485275 CSMD1Q96PZ7 3565 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 PPIAL4EA0A075B759 164 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 PPIAL4DF5H284 164 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 LGALS8O00214 317 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 TNFRSF13BO14836 293 aaPredicted RBP12.13□□□□□ -0.47
LRIF1-202ENST00000485275 NAPSAO96009 420 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 FCGR3AP08637 254 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 PPIAL4FP0DN26 164 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 DAOP14920 347 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 BTCP35070 178 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 MICBQ29980 383 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 HFEQ30201 348 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 NEU4Q8WWR8 484 aaPredicted RBP12.13□□□□□ -0.47
LRIF1-202ENST00000485275 COQ2Q96H96 371 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 CCL13Q99616 98 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 CCL19Q99731 98 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 CMSS1Q9BQ75 279 aaKnown RBP12.13□□□□□ -0.47
LRIF1-202ENST00000485275 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 SPACA1Q9HBV2 294 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 ING3Q9NXR8 418 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 PPIAL4AQ9Y536 164 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 SPG11Q96JI7 2443 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 IFNL4K9M1U5 179 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 RBBP9O75884 186 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 MUC1P15941 1255 aaPredicted RBP12.13□□□□□ -0.47
LRIF1-202ENST00000485275 GABRA2P47869 451 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 RFX2P48378 723 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 ZNF57Q68EA5 555 aaPredicted RBP12.13□□□□□ -0.47
LRIF1-202ENST00000485275 LYPD2Q6UXB3 125 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 ZNF788Q6ZQV5 615 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 C1orf87Q8N0U7 546 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 MRPL30Q8TCC3 161 aaKnown RBP12.13□□□□□ -0.47
LRIF1-202ENST00000485275 SDSLQ96GA7 329 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 OCEL1Q9H607 264 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 TMEM165Q9HC07 324 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 C12orf4Q9NQ89 552 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 ZNF701Q9NV72 531 aaPredicted RBP12.13□□□□□ -0.47
LRIF1-202ENST00000485275 ETAA1Q9NY74 926 aa12.13□□□□□ -0.47
LRIF1-202ENST00000485275 FASNP49327 2511 aaKnown RBP12.12□□□□□ -0.47
LRIF1-202ENST00000485275 TRAV39A0A0B4J263 110 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 IGHV2-70P01814 119 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 IGHV4-39P01824 125 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 CD3DP04234 171 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 BTG1P62324 171 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 ASAH1Q13510 395 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 ARL6IP1Q15041 203 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 AVPI1Q5T686 147 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 RSBN1Q5VWQ0 802 aaPredicted RBP12.12□□□□□ -0.47
LRIF1-202ENST00000485275 SHEQ5VZ18 495 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms