RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 RidaP52760 135 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 PkibQ04758 92 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 RabepkQ8VCH5 380 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr502Q8VG09 314 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Mrgpra6Q91ZC6 301 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Gorasp2Q99JX3 451 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 8030474K03RikE9Q4Y8 554 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 4930522L14RikE9QAG4 666 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 H2-M1F7CXU4 344 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Atp5j2P56135 88 aaKnown RBP12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Eif4eP63073 217 aaKnown RBP12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Tle4Q62441 773 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 NarflQ7TMW6 476 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Sec22aQ8BH47 307 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Smim37Q8BT35 56 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Nupl2Q8CIC2 420 aaKnown RBP12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Il34Q8R1R4 235 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Snx18Q91ZR2 614 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Lcn8Q924P3 175 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Tmem25Q9DCF1 365 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Nkain4Q9JMG4 208 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Cln8Q9QUK3 288 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Hsf4Q9R0L1 492 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Gm42791D3YYB5 209 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr427E9Q7E7 315 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Pcdh12O55134 1180 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Hprt1P00493 218 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Sult2a2P50236 285 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Gal3st2Q6XQH0 394 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Coq3Q8BMS4 370 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr378Q8VGT2 314 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr944Q9EQ91 311 aa12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Zc3h8Q9JJ48 305 aaKnown RBP12.56□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 CN725425A0A087WRU1 652 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 HpnO35453 436 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Rps2P25444 293 aaKnown RBP12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 TepsinQ3U3N6 573 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 SordQ64442 357 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Rab39bQ8BHC1 213 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Zc3h12dQ8BIY3 533 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Nrn1lQ8C4W3 162 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Slc25a45Q8CFJ7 288 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr1475Q8VEV6 314 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr584Q8VGW0 319 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Rab31Q921E2 194 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Sytl3Q99N48 607 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Tomm40lQ9CZR3 308 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 SrpxQ9R0M3 464 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Ccl27Q9Z1X0 120 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Phlda2O08969 144 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Pcbp3P57722 371 aaKnown RBP12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Ube2iP63280 158 aaKnown RBP12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Nhlh1Q02576 133 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Scarb1Q61009 509 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Nxph2Q61199 261 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Mindy2Q6PDI6 601 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Kcnip4Q6PHZ8 250 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Fam57bQ7TNV1 275 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr1087Q7TR63 313 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Cd177Q8R2S8 817 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr648Q8VG19 316 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Plekhf2Q91WB4 249 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Ube2fQ9CY34 185 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Tmem27Q9ESG4 222 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr545Q9WU94 316 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Scn5aQ9JJV9 2019 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Fbxw28E9Q8A4 466 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Vmn1r175K7N6T9 304 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 IfngP01580 155 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 RbpjP31266 526 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Cdk5r1P61809 307 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Bahd1Q497V6 772 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Cxcl3Q6W5C0 100 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Q8C4X7 151 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Vmn1r230Q8R2A2 316 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Chrnb4Q8R493 495 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 RhebQ921J2 184 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Kcnip1Q9JJ57 227 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Ighv1-78A0A0G2JGN3 117 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Hoxb5P09079 269 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Hnf1aP22361 628 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Nanos2P60322 136 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Npy1rQ04573 382 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 BocQ6AZB0 1110 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Mboat1Q8BH98 492 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Hs3st3a1Q8BKN6 393 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 A730049H05RikQ8C940 139 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Txnl1Q8CDN6 289 aaKnown RBP12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr993Q8VF75 314 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Mpped2Q9CZJ0 294 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Il36aQ9JLA2 160 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 HgfacQ9R098 653 aa12.55□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Ighv1-43A0A0A6YXN5 117 aa12.54□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Itgb4A2A863 1818 aa12.54□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Olfr417F8VQB1 309 aa12.54□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Scand1Q2M4I6 142 aa12.54□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Rhox10Q4TU83 196 aa12.54□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Cyb561a3Q6P1H1 242 aa12.54□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Tspoap1Q7TNF8 1846 aa12.54□□□□□ -0.4
Pcdha1-202ENSMUST00000193839 Map6Q7TSJ2 906 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms