Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Gm25239-201ENSMUST00000174915 86 ntBASIC35.2■■■■□ 3.23
Zc3h8Q9JJ48 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Zc3h8Q9JJ48 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Zc3h8Q9JJ48 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Zc3h8Q9JJ48 Gm15042-201ENSMUST00000120212 883 ntBASIC31■■■□□ 2.55
Zc3h8Q9JJ48 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Zc3h8Q9JJ48 Gm24109-201ENSMUST00000175489 103 ntBASIC30.41■■■□□ 2.46
Zc3h8Q9JJ48 Gm15045-201ENSMUST00000117359 883 ntBASIC30.35■■■□□ 2.45
Zc3h8Q9JJ48 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Zc3h8Q9JJ48 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Zc3h8Q9JJ48 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Zc3h8Q9JJ48 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Zc3h8Q9JJ48 Gm23366-201ENSMUST00000175022 89 ntBASIC29.45■■■□□ 2.31
Zc3h8Q9JJ48 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Zc3h8Q9JJ48 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Zc3h8Q9JJ48 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.1■■■□□ 2.25
Zc3h8Q9JJ48 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Zc3h8Q9JJ48 Psd-208ENSMUST00000224556 2034 ntBASIC28.86■■■□□ 2.21
Zc3h8Q9JJ48 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Zc3h8Q9JJ48 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Zc3h8Q9JJ48 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Zc3h8Q9JJ48 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Zc3h8Q9JJ48 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Zc3h8Q9JJ48 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Zc3h8Q9JJ48 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
Zc3h8Q9JJ48 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Zc3h8Q9JJ48 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.45■■■□□ 2.15
Zc3h8Q9JJ48 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.4■■■□□ 2.14
Zc3h8Q9JJ48 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h8Q9JJ48 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.11■■■□□ 2.09
Zc3h8Q9JJ48 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Zc3h8Q9JJ48 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.01■■■□□ 2.07
Zc3h8Q9JJ48 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Zc3h8Q9JJ48 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.93■■■□□ 2.06
Zc3h8Q9JJ48 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Zc3h8Q9JJ48 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Zc3h8Q9JJ48 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Zc3h8Q9JJ48 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Zc3h8Q9JJ48 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Zc3h8Q9JJ48 Gm25238-201ENSMUST00000174914 89 ntBASIC27.69■■■□□ 2.02
Zc3h8Q9JJ48 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.68■■■□□ 2.02
Zc3h8Q9JJ48 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.52■■■□□ 2
Zc3h8Q9JJ48 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Zc3h8Q9JJ48 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Zc3h8Q9JJ48 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Zc3h8Q9JJ48 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Zc3h8Q9JJ48 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Zc3h8Q9JJ48 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Zc3h8Q9JJ48 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.23■■□□□ 1.95
Zc3h8Q9JJ48 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
Zc3h8Q9JJ48 Gm27325-201ENSMUST00000175467 74 ntBASIC27.2■■□□□ 1.94
Zc3h8Q9JJ48 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.2■■□□□ 1.94
Zc3h8Q9JJ48 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Zc3h8Q9JJ48 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
Zc3h8Q9JJ48 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Zc3h8Q9JJ48 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.94■■□□□ 1.9
Zc3h8Q9JJ48 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Zc3h8Q9JJ48 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.93■■□□□ 1.9
Zc3h8Q9JJ48 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.9■■□□□ 1.9
Zc3h8Q9JJ48 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Zc3h8Q9JJ48 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Zc3h8Q9JJ48 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.83■■□□□ 1.89
Zc3h8Q9JJ48 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.82■■□□□ 1.88
Zc3h8Q9JJ48 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Zc3h8Q9JJ48 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Zc3h8Q9JJ48 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Zc3h8Q9JJ48 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Zc3h8Q9JJ48 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Zc3h8Q9JJ48 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Zc3h8Q9JJ48 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h8Q9JJ48 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h8Q9JJ48 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Zc3h8Q9JJ48 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Zc3h8Q9JJ48 Rab21-202ENSMUST00000218831 843 ntBASIC26.58■■□□□ 1.85
Zc3h8Q9JJ48 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Zc3h8Q9JJ48 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.53■■□□□ 1.84
Zc3h8Q9JJ48 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Zc3h8Q9JJ48 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.48■■□□□ 1.83
Zc3h8Q9JJ48 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.46■■□□□ 1.83
Zc3h8Q9JJ48 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Zc3h8Q9JJ48 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.45■■□□□ 1.82
Zc3h8Q9JJ48 Gm25262-201ENSMUST00000174934 133 ntBASIC26.43■■□□□ 1.82
Zc3h8Q9JJ48 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Zc3h8Q9JJ48 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Zc3h8Q9JJ48 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Zc3h8Q9JJ48 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Zc3h8Q9JJ48 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Zc3h8Q9JJ48 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Zc3h8Q9JJ48 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.19■■□□□ 1.78
Zc3h8Q9JJ48 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.18■■□□□ 1.78
Zc3h8Q9JJ48 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Zc3h8Q9JJ48 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Zc3h8Q9JJ48 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Zc3h8Q9JJ48 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Zc3h8Q9JJ48 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.01■■□□□ 1.75
Zc3h8Q9JJ48 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Zc3h8Q9JJ48 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Zc3h8Q9JJ48 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Zc3h8Q9JJ48 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Zc3h8Q9JJ48 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms