Protein–RNA interactions for Protein: Q8BH47

Sec22a, Vesicle-trafficking protein SEC22a, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22aQ8BH47 Gm25239-201ENSMUST00000174915 86 ntBASIC29.35■■■□□ 2.29
Sec22aQ8BH47 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Sec22aQ8BH47 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Sec22aQ8BH47 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sec22aQ8BH47 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sec22aQ8BH47 Psd-208ENSMUST00000224556 2034 ntBASIC27.37■■□□□ 1.97
Sec22aQ8BH47 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sec22aQ8BH47 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Sec22aQ8BH47 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sec22aQ8BH47 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sec22aQ8BH47 Gm15042-201ENSMUST00000120212 883 ntBASIC26.3■■□□□ 1.8
Sec22aQ8BH47 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sec22aQ8BH47 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sec22aQ8BH47 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sec22aQ8BH47 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sec22aQ8BH47 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sec22aQ8BH47 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Sec22aQ8BH47 Gm15045-201ENSMUST00000117359 883 ntBASIC25.86■■□□□ 1.73
Sec22aQ8BH47 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.85■■□□□ 1.73
Sec22aQ8BH47 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sec22aQ8BH47 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sec22aQ8BH47 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Sec22aQ8BH47 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sec22aQ8BH47 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Sec22aQ8BH47 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sec22aQ8BH47 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sec22aQ8BH47 Gm24109-201ENSMUST00000175489 103 ntBASIC25.16■■□□□ 1.62
Sec22aQ8BH47 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sec22aQ8BH47 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sec22aQ8BH47 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Sec22aQ8BH47 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.11■■□□□ 1.61
Sec22aQ8BH47 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sec22aQ8BH47 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sec22aQ8BH47 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sec22aQ8BH47 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sec22aQ8BH47 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sec22aQ8BH47 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.93■■□□□ 1.58
Sec22aQ8BH47 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sec22aQ8BH47 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.83■■□□□ 1.56
Sec22aQ8BH47 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.82■■□□□ 1.56
Sec22aQ8BH47 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sec22aQ8BH47 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sec22aQ8BH47 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sec22aQ8BH47 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.7■■□□□ 1.54
Sec22aQ8BH47 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Sec22aQ8BH47 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sec22aQ8BH47 Gm23366-201ENSMUST00000175022 89 ntBASIC24.6■■□□□ 1.53
Sec22aQ8BH47 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sec22aQ8BH47 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.49■■□□□ 1.51
Sec22aQ8BH47 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sec22aQ8BH47 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.47■■□□□ 1.51
Sec22aQ8BH47 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sec22aQ8BH47 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sec22aQ8BH47 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sec22aQ8BH47 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sec22aQ8BH47 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sec22aQ8BH47 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sec22aQ8BH47 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Sec22aQ8BH47 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sec22aQ8BH47 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sec22aQ8BH47 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.15■■□□□ 1.46
Sec22aQ8BH47 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Sec22aQ8BH47 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Sec22aQ8BH47 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Sec22aQ8BH47 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sec22aQ8BH47 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sec22aQ8BH47 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Sec22aQ8BH47 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sec22aQ8BH47 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.84■■□□□ 1.41
Sec22aQ8BH47 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Sec22aQ8BH47 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sec22aQ8BH47 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sec22aQ8BH47 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sec22aQ8BH47 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sec22aQ8BH47 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Sec22aQ8BH47 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sec22aQ8BH47 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sec22aQ8BH47 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Sec22aQ8BH47 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sec22aQ8BH47 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sec22aQ8BH47 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Sec22aQ8BH47 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sec22aQ8BH47 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sec22aQ8BH47 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
Sec22aQ8BH47 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sec22aQ8BH47 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sec22aQ8BH47 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Sec22aQ8BH47 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Sec22aQ8BH47 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sec22aQ8BH47 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sec22aQ8BH47 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.36■■□□□ 1.33
Sec22aQ8BH47 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.34■■□□□ 1.33
Sec22aQ8BH47 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Sec22aQ8BH47 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sec22aQ8BH47 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sec22aQ8BH47 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.3■■□□□ 1.32
Sec22aQ8BH47 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sec22aQ8BH47 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sec22aQ8BH47 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sec22aQ8BH47 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms