Protein–RNA interactions for Protein: Q8BKN6

Hs3st3a1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hs3st3a1Q8BKN6 Gm25239-201ENSMUST00000174915 86 ntBASIC37.3■■■■□ 3.56
Hs3st3a1Q8BKN6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Hs3st3a1Q8BKN6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Hs3st3a1Q8BKN6 Gm15042-201ENSMUST00000120212 883 ntBASIC32.49■■■□□ 2.79
Hs3st3a1Q8BKN6 Gm24109-201ENSMUST00000175489 103 ntBASIC32.39■■■□□ 2.78
Hs3st3a1Q8BKN6 Gm15045-201ENSMUST00000117359 883 ntBASIC31.8■■■□□ 2.68
Hs3st3a1Q8BKN6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Hs3st3a1Q8BKN6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Hs3st3a1Q8BKN6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hs3st3a1Q8BKN6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Hs3st3a1Q8BKN6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Hs3st3a1Q8BKN6 Gm23366-201ENSMUST00000175022 89 ntBASIC31.08■■■□□ 2.57
Hs3st3a1Q8BKN6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Hs3st3a1Q8BKN6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
Hs3st3a1Q8BKN6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Hs3st3a1Q8BKN6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.24■■■□□ 2.43
Hs3st3a1Q8BKN6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.05■■■□□ 2.4
Hs3st3a1Q8BKN6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hs3st3a1Q8BKN6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Hs3st3a1Q8BKN6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Hs3st3a1Q8BKN6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.91■■■□□ 2.38
Hs3st3a1Q8BKN6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.87■■■□□ 2.37
Hs3st3a1Q8BKN6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Hs3st3a1Q8BKN6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Hs3st3a1Q8BKN6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Hs3st3a1Q8BKN6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Hs3st3a1Q8BKN6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
Hs3st3a1Q8BKN6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Hs3st3a1Q8BKN6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Hs3st3a1Q8BKN6 Gm25238-201ENSMUST00000174914 89 ntBASIC29.49■■■□□ 2.31
Hs3st3a1Q8BKN6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Hs3st3a1Q8BKN6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.38■■■□□ 2.29
Hs3st3a1Q8BKN6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.29■■■□□ 2.28
Hs3st3a1Q8BKN6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Hs3st3a1Q8BKN6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Hs3st3a1Q8BKN6 Psd-208ENSMUST00000224556 2034 ntBASIC29.08■■■□□ 2.25
Hs3st3a1Q8BKN6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Hs3st3a1Q8BKN6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
Hs3st3a1Q8BKN6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.69■■■□□ 2.18
Hs3st3a1Q8BKN6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.66■■■□□ 2.18
Hs3st3a1Q8BKN6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Hs3st3a1Q8BKN6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Hs3st3a1Q8BKN6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Hs3st3a1Q8BKN6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.46■■■□□ 2.15
Hs3st3a1Q8BKN6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
Hs3st3a1Q8BKN6 Gm27325-201ENSMUST00000175467 74 ntBASIC28.45■■■□□ 2.14
Hs3st3a1Q8BKN6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Hs3st3a1Q8BKN6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.3■■■□□ 2.12
Hs3st3a1Q8BKN6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Hs3st3a1Q8BKN6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Hs3st3a1Q8BKN6 Gm25262-201ENSMUST00000174934 133 ntBASIC28.21■■■□□ 2.11
Hs3st3a1Q8BKN6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.12■■■□□ 2.09
Hs3st3a1Q8BKN6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Hs3st3a1Q8BKN6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Hs3st3a1Q8BKN6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.06■■■□□ 2.08
Hs3st3a1Q8BKN6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Hs3st3a1Q8BKN6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28■■■□□ 2.07
Hs3st3a1Q8BKN6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Hs3st3a1Q8BKN6 Rab21-202ENSMUST00000218831 843 ntBASIC27.97■■■□□ 2.07
Hs3st3a1Q8BKN6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.89■■■□□ 2.06
Hs3st3a1Q8BKN6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Hs3st3a1Q8BKN6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Hs3st3a1Q8BKN6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Hs3st3a1Q8BKN6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.73■■■□□ 2.03
Hs3st3a1Q8BKN6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Hs3st3a1Q8BKN6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.71■■■□□ 2.03
Hs3st3a1Q8BKN6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.71■■■□□ 2.03
Hs3st3a1Q8BKN6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.69■■■□□ 2.02
Hs3st3a1Q8BKN6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Hs3st3a1Q8BKN6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Hs3st3a1Q8BKN6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Hs3st3a1Q8BKN6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.6■■■□□ 2.01
Hs3st3a1Q8BKN6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Hs3st3a1Q8BKN6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Hs3st3a1Q8BKN6 Gm26115-201ENSMUST00000175605 87 ntBASIC27.53■■■□□ 2
Hs3st3a1Q8BKN6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Hs3st3a1Q8BKN6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Hs3st3a1Q8BKN6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Hs3st3a1Q8BKN6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Hs3st3a1Q8BKN6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Hs3st3a1Q8BKN6 Gm8109-201ENSMUST00000194076 746 ntBASIC27.45■■□□□ 1.98
Hs3st3a1Q8BKN6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Hs3st3a1Q8BKN6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Hs3st3a1Q8BKN6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Hs3st3a1Q8BKN6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Hs3st3a1Q8BKN6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Hs3st3a1Q8BKN6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Hs3st3a1Q8BKN6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Hs3st3a1Q8BKN6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.3■■□□□ 1.96
Hs3st3a1Q8BKN6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.27■■□□□ 1.96
Hs3st3a1Q8BKN6 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.26■■□□□ 1.95
Hs3st3a1Q8BKN6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Hs3st3a1Q8BKN6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.25■■□□□ 1.95
Hs3st3a1Q8BKN6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Hs3st3a1Q8BKN6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Hs3st3a1Q8BKN6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Hs3st3a1Q8BKN6 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.13■■□□□ 1.93
Hs3st3a1Q8BKN6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.1■■□□□ 1.93
Hs3st3a1Q8BKN6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.1■■□□□ 1.93
Hs3st3a1Q8BKN6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.08■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms