Protein–RNA interactions for Protein: Q8R2A2

Vmn1r230, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r230Q8R2A2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Vmn1r230Q8R2A2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Vmn1r230Q8R2A2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Vmn1r230Q8R2A2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Vmn1r230Q8R2A2 Psd-208ENSMUST00000224556 2034 ntBASIC26.41■■□□□ 1.82
Vmn1r230Q8R2A2 Gm25239-201ENSMUST00000174915 86 ntBASIC26.38■■□□□ 1.81
Vmn1r230Q8R2A2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Vmn1r230Q8R2A2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Vmn1r230Q8R2A2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Vmn1r230Q8R2A2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Vmn1r230Q8R2A2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Vmn1r230Q8R2A2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Vmn1r230Q8R2A2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Vmn1r230Q8R2A2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Vmn1r230Q8R2A2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vmn1r230Q8R2A2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Vmn1r230Q8R2A2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vmn1r230Q8R2A2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Vmn1r230Q8R2A2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vmn1r230Q8R2A2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Vmn1r230Q8R2A2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r230Q8R2A2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Vmn1r230Q8R2A2 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.5■■□□□ 1.51
Vmn1r230Q8R2A2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vmn1r230Q8R2A2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Vmn1r230Q8R2A2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vmn1r230Q8R2A2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.06■■□□□ 1.44
Vmn1r230Q8R2A2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r230Q8R2A2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Vmn1r230Q8R2A2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vmn1r230Q8R2A2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r230Q8R2A2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Vmn1r230Q8R2A2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vmn1r230Q8R2A2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Vmn1r230Q8R2A2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.63■■□□□ 1.37
Vmn1r230Q8R2A2 Gm15042-201ENSMUST00000120212 883 ntBASIC23.63■■□□□ 1.37
Vmn1r230Q8R2A2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vmn1r230Q8R2A2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Vmn1r230Q8R2A2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r230Q8R2A2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vmn1r230Q8R2A2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vmn1r230Q8R2A2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Vmn1r230Q8R2A2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vmn1r230Q8R2A2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Vmn1r230Q8R2A2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vmn1r230Q8R2A2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vmn1r230Q8R2A2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vmn1r230Q8R2A2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.3■■□□□ 1.32
Vmn1r230Q8R2A2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vmn1r230Q8R2A2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.26■■□□□ 1.31
Vmn1r230Q8R2A2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vmn1r230Q8R2A2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Vmn1r230Q8R2A2 Gm15045-201ENSMUST00000117359 883 ntBASIC23.19■■□□□ 1.3
Vmn1r230Q8R2A2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.19■■□□□ 1.3
Vmn1r230Q8R2A2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r230Q8R2A2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vmn1r230Q8R2A2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vmn1r230Q8R2A2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.02■■□□□ 1.28
Vmn1r230Q8R2A2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r230Q8R2A2 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.98■■□□□ 1.27
Vmn1r230Q8R2A2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vmn1r230Q8R2A2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Vmn1r230Q8R2A2 Zxda-201ENSMUST00000117281 2621 ntBASIC22.87■■□□□ 1.25
Vmn1r230Q8R2A2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vmn1r230Q8R2A2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Vmn1r230Q8R2A2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vmn1r230Q8R2A2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vmn1r230Q8R2A2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vmn1r230Q8R2A2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vmn1r230Q8R2A2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vmn1r230Q8R2A2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Vmn1r230Q8R2A2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Vmn1r230Q8R2A2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vmn1r230Q8R2A2 Gm24109-201ENSMUST00000175489 103 ntBASIC22.59■■□□□ 1.21
Vmn1r230Q8R2A2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
Vmn1r230Q8R2A2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Vmn1r230Q8R2A2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vmn1r230Q8R2A2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vmn1r230Q8R2A2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Vmn1r230Q8R2A2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r230Q8R2A2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r230Q8R2A2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r230Q8R2A2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Vmn1r230Q8R2A2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r230Q8R2A2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r230Q8R2A2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vmn1r230Q8R2A2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Vmn1r230Q8R2A2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vmn1r230Q8R2A2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.46■■□□□ 1.19
Vmn1r230Q8R2A2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.46■■□□□ 1.19
Vmn1r230Q8R2A2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vmn1r230Q8R2A2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Vmn1r230Q8R2A2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vmn1r230Q8R2A2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Vmn1r230Q8R2A2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.35■■□□□ 1.17
Vmn1r230Q8R2A2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r230Q8R2A2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vmn1r230Q8R2A2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r230Q8R2A2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r230Q8R2A2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms