Protein–RNA interactions for Protein: Q8BHC1

Rab39b, Ras-related protein Rab-39B, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39bQ8BHC1 Gm25239-201ENSMUST00000174915 86 ntBASIC31.66■■■□□ 2.66
Rab39bQ8BHC1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Rab39bQ8BHC1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Rab39bQ8BHC1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rab39bQ8BHC1 Gm15042-201ENSMUST00000120212 883 ntBASIC27.76■■■□□ 2.03
Rab39bQ8BHC1 Gm24109-201ENSMUST00000175489 103 ntBASIC27.38■■□□□ 1.97
Rab39bQ8BHC1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rab39bQ8BHC1 Gm15045-201ENSMUST00000117359 883 ntBASIC27.07■■□□□ 1.92
Rab39bQ8BHC1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Rab39bQ8BHC1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rab39bQ8BHC1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Rab39bQ8BHC1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rab39bQ8BHC1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rab39bQ8BHC1 Gm23366-201ENSMUST00000175022 89 ntBASIC26.53■■□□□ 1.84
Rab39bQ8BHC1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rab39bQ8BHC1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rab39bQ8BHC1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rab39bQ8BHC1 Psd-208ENSMUST00000224556 2034 ntBASIC25.92■■□□□ 1.74
Rab39bQ8BHC1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rab39bQ8BHC1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Rab39bQ8BHC1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.62■■□□□ 1.69
Rab39bQ8BHC1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rab39bQ8BHC1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Rab39bQ8BHC1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rab39bQ8BHC1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.51■■□□□ 1.67
Rab39bQ8BHC1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rab39bQ8BHC1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.33■■□□□ 1.65
Rab39bQ8BHC1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
Rab39bQ8BHC1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rab39bQ8BHC1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rab39bQ8BHC1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rab39bQ8BHC1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rab39bQ8BHC1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rab39bQ8BHC1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rab39bQ8BHC1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.1■■□□□ 1.61
Rab39bQ8BHC1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rab39bQ8BHC1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.06■■□□□ 1.6
Rab39bQ8BHC1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rab39bQ8BHC1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rab39bQ8BHC1 Gm25238-201ENSMUST00000174914 89 ntBASIC24.92■■□□□ 1.58
Rab39bQ8BHC1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rab39bQ8BHC1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rab39bQ8BHC1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.7■■□□□ 1.54
Rab39bQ8BHC1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rab39bQ8BHC1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rab39bQ8BHC1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
Rab39bQ8BHC1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rab39bQ8BHC1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rab39bQ8BHC1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.44■■□□□ 1.5
Rab39bQ8BHC1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Rab39bQ8BHC1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rab39bQ8BHC1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rab39bQ8BHC1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rab39bQ8BHC1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.34■■□□□ 1.49
Rab39bQ8BHC1 Gm27325-201ENSMUST00000175467 74 ntBASIC24.31■■□□□ 1.48
Rab39bQ8BHC1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rab39bQ8BHC1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.29■■□□□ 1.48
Rab39bQ8BHC1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rab39bQ8BHC1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Rab39bQ8BHC1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.18■■□□□ 1.46
Rab39bQ8BHC1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Rab39bQ8BHC1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rab39bQ8BHC1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rab39bQ8BHC1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rab39bQ8BHC1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24■■□□□ 1.43
Rab39bQ8BHC1 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.98■■□□□ 1.43
Rab39bQ8BHC1 Gm25262-201ENSMUST00000174934 133 ntBASIC23.98■■□□□ 1.43
Rab39bQ8BHC1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab39bQ8BHC1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rab39bQ8BHC1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rab39bQ8BHC1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.93■■□□□ 1.42
Rab39bQ8BHC1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rab39bQ8BHC1 Rab21-202ENSMUST00000218831 843 ntBASIC23.89■■□□□ 1.41
Rab39bQ8BHC1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rab39bQ8BHC1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rab39bQ8BHC1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
Rab39bQ8BHC1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rab39bQ8BHC1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.81■■□□□ 1.4
Rab39bQ8BHC1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab39bQ8BHC1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rab39bQ8BHC1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rab39bQ8BHC1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Rab39bQ8BHC1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rab39bQ8BHC1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rab39bQ8BHC1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rab39bQ8BHC1 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.67■■□□□ 1.38
Rab39bQ8BHC1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rab39bQ8BHC1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rab39bQ8BHC1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Rab39bQ8BHC1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.61■■□□□ 1.37
Rab39bQ8BHC1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.59■■□□□ 1.37
Rab39bQ8BHC1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rab39bQ8BHC1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.52■■□□□ 1.36
Rab39bQ8BHC1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.51■■□□□ 1.35
Rab39bQ8BHC1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rab39bQ8BHC1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rab39bQ8BHC1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Rab39bQ8BHC1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rab39bQ8BHC1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.48■■□□□ 1.35
Rab39bQ8BHC1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms