RNA–Protein interactions for RNA: snR60

snR60, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR60, Length 104 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR60snR60 REC102Q02721 264 aa2.45□□□□□ -2.02
snR60snR60 RNR1P21524 888 aaKnown RBP2.44□□□□□ -2.02
snR60snR60 KCC4P25389 1037 aa2.44□□□□□ -2.02
snR60snR60 MCD4P36051 919 aa2.44□□□□□ -2.02
snR60snR60 MIT1P40002 666 aa2.44□□□□□ -2.02
snR60snR60 NET1P47035 1189 aa2.44□□□□□ -2.02
snR60snR60 NOP9P47077 666 aaKnown RBP2.44□□□□□ -2.02
snR60snR60 THI22Q06490 572 aa2.44□□□□□ -2.02
snR60snR60 BMS1Q08965 1183 aaKnown RBP2.44□□□□□ -2.02
snR60snR60 USV1Q12132 391 aa2.44□□□□□ -2.02
snR60snR60 PRP28P23394 588 aa2.43□□□□□ -2.02
snR60snR60 PTP1P25044 335 aa2.43□□□□□ -2.02
snR60snR60 BIT2P38346 545 aa2.43□□□□□ -2.02
snR60snR60 YGR151CP53287 111 aa2.43□□□□□ -2.02
snR60snR60 HFD1Q04458 532 aa2.43□□□□□ -2.02
snR60snR60 CIR2Q08822 631 aa2.43□□□□□ -2.02
snR60snR60 RGT2Q12300 763 aa2.43□□□□□ -2.02
snR60snR60 PHO5P00635 467 aa2.42□□□□□ -2.02
snR60snR60 RAD18P10862 487 aa2.42□□□□□ -2.02
snR60snR60 MBR1P23493 339 aa2.42□□□□□ -2.02
snR60snR60 MIH1P23748 554 aa2.42□□□□□ -2.02
snR60snR60 SAT4P25333 603 aaKnown RBP2.42□□□□□ -2.02
snR60snR60 BCS1P32839 456 aa2.42□□□□□ -2.02
snR60snR60 UGP1P32861 499 aaKnown RBP2.42□□□□□ -2.02
snR60snR60 GDH3P39708 457 aa2.42□□□□□ -2.02
snR60snR60 MAL11P53048 616 aa2.42□□□□□ -2.02
snR60snR60 HUL5P53119 910 aa2.42□□□□□ -2.02
snR60snR60 Q0142Q9ZZW4 58 aa2.42□□□□□ -2.02
snR60snR60 ERG11P10614 530 aa2.41□□□□□ -2.02
snR60snR60 ABF1P14164 731 aa2.41□□□□□ -2.02
snR60snR60 RPA135P22138 1203 aaKnown RBP2.41□□□□□ -2.02
snR60snR60 YMC1P32331 307 aa2.41□□□□□ -2.02
snR60snR60 YKR018CP36114 725 aa2.41□□□□□ -2.02
snR60snR60 CCT5P40413 562 aaKnown RBP2.41□□□□□ -2.02
snR60snR60 CAF16P43569 289 aa2.41□□□□□ -2.02
snR60snR60 RSC8P43609 557 aaKnown RBP2.41□□□□□ -2.02
snR60snR60 BPL1P48445 690 aaPredicted RBP2.41□□□□□ -2.02
snR60snR60 SCS3P53012 380 aa2.41□□□□□ -2.02
snR60snR60 SNP1Q00916 300 aaPredicted RBP2.41□□□□□ -2.02
snR60snR60 ADE5,7P07244 802 aaKnown RBP2.4□□□□□ -2.03
snR60snR60 GAL11P19659 1081 aa2.4□□□□□ -2.03
snR60snR60 APN1P22936 367 aa2.4□□□□□ -2.03
snR60snR60 YPT7P32939 208 aa2.4□□□□□ -2.03
snR60snR60 STO1P34160 861 aaKnown RBP2.4□□□□□ -2.03
snR60snR60 KSP1P38691 1029 aaKnown RBP2.4□□□□□ -2.03
snR60snR60 PMC1P38929 1173 aaPredicted RBP2.4□□□□□ -2.03
snR60snR60 PIG2P40187 538 aa2.4□□□□□ -2.03
snR60snR60 XBP1P40489 647 aa2.4□□□□□ -2.03
snR60snR60 YFL052WP43551 465 aa2.4□□□□□ -2.03
snR60snR60 STB2P46679 850 aa2.4□□□□□ -2.03
snR60snR60 MPS1P54199 764 aa2.4□□□□□ -2.03
snR60snR60 YPL068CQ02749 293 aa2.4□□□□□ -2.03
snR60snR60 FMP30Q02883 468 aa2.4□□□□□ -2.03
snR60snR60 YDL086WQ07505 273 aa2.4□□□□□ -2.03
snR60snR60 CHS5Q12114 671 aaKnown RBP2.4□□□□□ -2.03
snR60snR60 STE12P13574 688 aa2.39□□□□□ -2.03
snR60snR60 MSS1P32559 526 aaPredicted RBP2.39□□□□□ -2.03
snR60snR60 YKR051WP36142 418 aa2.39□□□□□ -2.03
snR60snR60 CTP1P38152 299 aa2.39□□□□□ -2.03
snR60snR60 YHR097CP38809 366 aaKnown RBP2.39□□□□□ -2.03
snR60snR60 RPN10P38886 268 aaKnown RBP2.39□□□□□ -2.03
snR60snR60 KHA1P40309 873 aa2.39□□□□□ -2.03
snR60snR60 ASN1P49089 572 aaKnown RBP2.39□□□□□ -2.03
snR60snR60 PCL10P53124 433 aa2.39□□□□□ -2.03
snR60snR60 NPY1P53164 384 aa2.39□□□□□ -2.03
snR60snR60 SPC98P53540 846 aa2.39□□□□□ -2.03
snR60snR60 ARP4P80428 489 aa2.39□□□□□ -2.03
snR60snR60 LEE1Q02799 301 aaKnown RBP2.39□□□□□ -2.03
snR60snR60 DIA2Q08496 732 aaPredicted RBP2.39□□□□□ -2.03
snR60snR60 ULA1Q12059 462 aa2.39□□□□□ -2.03
snR60snR60 MDM12Q92328 271 aa2.39□□□□□ -2.03
snR60snR60 NUP1P20676 1076 aa2.38□□□□□ -2.03
snR60snR60 FEN2P25621 512 aaKnown RBP2.38□□□□□ -2.03
snR60snR60 YEL1P34225 687 aa2.38□□□□□ -2.03
snR60snR60 HSL7P38274 827 aa2.38□□□□□ -2.03
snR60snR60 ULP2P40537 1034 aaPredicted RBP2.38□□□□□ -2.03
snR60snR60 SET2P46995 733 aaKnown RBP2.38□□□□□ -2.03
snR60snR60 TAX4P47030 604 aa2.38□□□□□ -2.03
snR60snR60 MPS3P47069 682 aa2.38□□□□□ -2.03
snR60snR60 ARG7Q04728 441 aa2.38□□□□□ -2.03
snR60snR60 RPN7Q06103 429 aaKnown RBP2.38□□□□□ -2.03
snR60snR60 GEP3Q08622 556 aa2.38□□□□□ -2.03
snR60snR60 ECM3Q99252 613 aa2.38□□□□□ -2.03
snR60snR60 LAM4P38800 1345 aa2.38□□□□□ -2.03
snR60snR60 CDC9P04819 755 aa2.37□□□□□ -2.03
snR60snR60 TPK2P06245 380 aa2.37□□□□□ -2.03
snR60snR60 HOT13P36078 116 aa2.37□□□□□ -2.03
snR60snR60 YNL195CP40168 261 aa2.37□□□□□ -2.03
snR60snR60 YGL117WP53133 265 aa2.37□□□□□ -2.03
snR60snR60 NMA2P53204 395 aa2.37□□□□□ -2.03
snR60snR60 SNF12P53628 566 aa2.37□□□□□ -2.03
snR60snR60 BRE5P53741 515 aaKnown RBP2.37□□□□□ -2.03
snR60snR60 NHX1Q04121 633 aa2.37□□□□□ -2.03
snR60snR60 TDA9Q04545 1251 aa2.37□□□□□ -2.03
snR60snR60 YSH1Q06224 779 aaPredicted RBP2.37□□□□□ -2.03
snR60snR60 RKI1Q12189 258 aa2.37□□□□□ -2.03
snR60snR60 LEU2P04173 364 aaPredicted RBP2.36□□□□□ -2.03
snR60snR60 STI1P15705 589 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
snR60snR60 HOG1P32485 435 aa2.36□□□□□ -2.03
snR60snR60 RGT1P32862 1170 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms