RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 TOK1P40310 691 aa1.69□□□□□ -2.14
snR48snR48 LCD1Q04377 747 aa1.69□□□□□ -2.14
snR48snR48 THI21Q08975 551 aa1.69□□□□□ -2.14
snR48snR48 HER1Q12276 1246 aa1.69□□□□□ -2.14
snR48snR48 YPT1P01123 206 aaKnown RBP1.68□□□□□ -2.14
snR48snR48 PRI2P20457 528 aa1.68□□□□□ -2.14
snR48snR48 MTR3P48240 250 aaPredicted RBP1.68□□□□□ -2.14
snR48snR48 IDP3P53982 420 aaKnown RBP1.68□□□□□ -2.14
snR48snR48 RRP15Q06511 250 aaPredicted RBP1.68□□□□□ -2.14
snR48snR48 GRS2Q06817 618 aa1.68□□□□□ -2.14
snR48snR48 YPR071WQ12346 211 aa1.68□□□□□ -2.14
snR48snR48 MDM20Q12387 796 aaKnown RBP1.68□□□□□ -2.14
snR48snR48 HRP1Q99383 534 aaKnown RBP1.68□□□□□ -2.14
snR48snR48 YER190C-BP0CX94 160 aa1.67□□□□□ -2.14
snR48snR48 YEL077W-AP0CX95 160 aa1.67□□□□□ -2.14
snR48snR48 YGR296C-BP0CX96 160 aa1.67□□□□□ -2.14
snR48snR48 YPL283W-BP0CX97 160 aa1.67□□□□□ -2.14
snR48snR48 YPR204C-AP0CX98 160 aa1.67□□□□□ -2.14
snR48snR48 TOP3P13099 656 aa1.67□□□□□ -2.14
snR48snR48 ABF1P14164 731 aa1.67□□□□□ -2.14
snR48snR48 YAP1P19880 650 aaKnown RBP1.67□□□□□ -2.14
snR48snR48 DAL7P21826 554 aa1.67□□□□□ -2.14
snR48snR48 YBR284WP38150 797 aa1.67□□□□□ -2.14
snR48snR48 FLO5P38894 1075 aa1.67□□□□□ -2.14
snR48snR48 IRR1P40541 1150 aa1.67□□□□□ -2.14
snR48snR48 YGL117WP53133 265 aa1.67□□□□□ -2.14
snR48snR48 NOG2P53742 486 aaKnown RBP1.67□□□□□ -2.14
snR48snR48 SHE9Q04172 456 aa1.67□□□□□ -2.14
snR48snR48 BSC6Q08280 497 aa1.67□□□□□ -2.14
snR48snR48 APL2P36000 726 aaPredicted RBP1.66□□□□□ -2.14
snR48snR48 TRZ1P36159 838 aaPredicted RBP1.66□□□□□ -2.14
snR48snR48 YHR112CP38716 378 aa1.66□□□□□ -2.14
snR48snR48 CRP1P38845 465 aaKnown RBP1.66□□□□□ -2.14
snR48snR48 YMR124WP39523 943 aaKnown RBP1.66□□□□□ -2.14
snR48snR48 NIT3P49954 291 aa1.66□□□□□ -2.14
snR48snR48 SNA4Q07549 140 aa1.66□□□□□ -2.14
snR48snR48 NRT1Q08485 598 aa1.66□□□□□ -2.14
snR48snR48 YMR230W-AQ3E7B5 62 aa1.66□□□□□ -2.14
snR48snR48 LAM4P38800 1345 aa1.66□□□□□ -2.14
snR48snR48 YCL002CP25565 263 aa1.65□□□□□ -2.15
snR48snR48 YKL069WP36088 180 aa1.65□□□□□ -2.15
snR48snR48 PBY1P38254 753 aa1.65□□□□□ -2.15
snR48snR48 AZF1P41696 914 aa1.65□□□□□ -2.15
snR48snR48 PMT6P42934 759 aa1.65□□□□□ -2.15
snR48snR48 TAD1P53065 400 aa1.65□□□□□ -2.15
snR48snR48 LRS4Q04087 347 aaKnown RBP1.65□□□□□ -2.15
snR48snR48 VPS36Q06696 566 aa1.65□□□□□ -2.15
snR48snR48 OPI10Q08202 246 aa1.65□□□□□ -2.15
snR48snR48 YCP4P25349 247 aaKnown RBP1.64□□□□□ -2.15
snR48snR48 CDC11P32458 415 aa1.64□□□□□ -2.15
snR48snR48 MRP8P35719 219 aa1.64□□□□□ -2.15
snR48snR48 MAD1P40957 749 aa1.64□□□□□ -2.15
snR48snR48 SHR5P41912 237 aa1.64□□□□□ -2.15
snR48snR48 PRP31P49704 494 aaPredicted RBP1.64□□□□□ -2.15
snR48snR48 YBP2P53169 641 aa1.64□□□□□ -2.15
snR48snR48 CPR8P53728 308 aa1.64□□□□□ -2.15
snR48snR48 YDR179W-AQ03983 463 aa1.64□□□□□ -2.15
snR48snR48 YDL086WQ07505 273 aa1.64□□□□□ -2.15
snR48snR48 PRP9P19736 530 aaKnown RBP1.63□□□□□ -2.15
snR48snR48 ERG6P25087 383 aaKnown RBP1.63□□□□□ -2.15
snR48snR48 HEM3P28789 327 aa1.63□□□□□ -2.15
snR48snR48 FMP46P36141 133 aaKnown RBP1.63□□□□□ -2.15
snR48snR48 LYS20P48570 428 aaKnown RBP1.63□□□□□ -2.15
snR48snR48 YMR317WQ04893 1140 aa1.63□□□□□ -2.15
snR48snR48 ENV7Q12003 364 aa1.63□□□□□ -2.15
snR48snR48 PMA2P19657 947 aa1.62□□□□□ -2.15
snR48snR48 ADE2P21264 571 aaKnown RBP1.62□□□□□ -2.15
snR48snR48 MRPL9P31334 269 aa1.62□□□□□ -2.15
snR48snR48 ASF1P32447 279 aa1.62□□□□□ -2.15
snR48snR48 HBS1P32769 611 aaKnown RBP1.62□□□□□ -2.15
snR48snR48 APD1P38281 316 aa1.62□□□□□ -2.15
snR48snR48 PCA1P38360 1216 aa1.62□□□□□ -2.15
snR48snR48 YHR097CP38809 366 aaKnown RBP1.62□□□□□ -2.15
snR48snR48 GET2P40056 285 aa1.62□□□□□ -2.15
snR48snR48 ALR2P43553 858 aa1.62□□□□□ -2.15
snR48snR48 BST1P43571 1029 aa1.62□□□□□ -2.15
snR48snR48 ARG5,6Q01217 863 aa1.62□□□□□ -2.15
snR48snR48 FCP1Q03254 732 aa1.62□□□□□ -2.15
snR48snR48 MCM21Q06675 368 aa1.62□□□□□ -2.15
snR48snR48 YEL076C-AP0CX16 216 aa1.61□□□□□ -2.15
snR48snR48 YLR464WP0CX17 216 aa1.61□□□□□ -2.15
snR48snR48 MSD1P15179 658 aaKnown RBP1.61□□□□□ -2.15
snR48snR48 SET5P38890 526 aaKnown RBP1.61□□□□□ -2.15
snR48snR48 YEL076CP39971 216 aa1.61□□□□□ -2.15
snR48snR48 UBP7P40453 1071 aa1.61□□□□□ -2.15
snR48snR48 APJ1P53940 528 aa1.61□□□□□ -2.15
snR48snR48 ENT2Q05785 613 aa1.61□□□□□ -2.15
snR48snR48 RKI1Q12189 258 aa1.61□□□□□ -2.15
snR48snR48 RAD18P10862 487 aa1.6□□□□□ -2.15
snR48snR48 PEX1P24004 1043 aa1.6□□□□□ -2.15
snR48snR48 TIF3P34167 436 aaKnown RBP1.6□□□□□ -2.15
snR48snR48 NGL2Q03264 515 aaKnown RBP1.6□□□□□ -2.15
snR48snR48 UBX5Q06682 500 aa1.6□□□□□ -2.15
snR48snR48 URE2P23202 354 aaKnown RBP1.59□□□□□ -2.15
snR48snR48 PRP28P23394 588 aa1.59□□□□□ -2.15
snR48snR48 STE5P32917 917 aa1.59□□□□□ -2.15
snR48snR48 APL3P38065 1025 aa1.59□□□□□ -2.15
snR48snR48 YBR184WP38299 523 aa1.59□□□□□ -2.15
snR48snR48 YIL024CP40543 189 aa1.59□□□□□ -2.15
snR48snR48 HMO1Q03973 246 aaKnown RBP1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms