RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	SRD1	P09007	221 aa		0.68	□□□□□ -2.3
snR45	snR45	AFR1	P33304	620 aa		0.68	□□□□□ -2.3
snR45	snR45	YIL152W	P40455	235 aa		0.68	□□□□□ -2.3
snR45	snR45	CFD1	P40558	293 aa		0.68	□□□□□ -2.3
snR45	snR45	GUS1	P46655	708 aa	Known RBP RIP-Chip data	0.68	□□□□□ -2.3	not detected
snR45	snR45	MDV1	P47025	714 aa		0.68	□□□□□ -2.3
snR45	snR45	YDR179W-A	Q03983	463 aa		0.68	□□□□□ -2.3
snR45	snR45	TOR2	P32600	2474 aa	Known RBP	0.67	□□□□□ -2.3
snR45	snR45	ACC1	Q00955	2233 aa	Known RBP	0.67	□□□□□ -2.3
snR45	snR45	PPX1	P38698	397 aa		0.67	□□□□□ -2.3
snR45	snR45	VRG4	P40107	337 aa		0.67	□□□□□ -2.3
snR45	snR45	CPR8	P53728	308 aa		0.67	□□□□□ -2.3
snR45	snR45	RPL15B	P54780	204 aa	Predicted RBP	0.67	□□□□□ -2.3
snR45	snR45	RGC1	Q06108	1083 aa	Known RBP	0.67	□□□□□ -2.3
snR45	snR45	RSC3	Q06639	885 aa		0.67	□□□□□ -2.3
snR45	snR45	SUB2	Q07478	446 aa	Known RBP	0.67	□□□□□ -2.3
snR45	snR45	MEC1	P38111	2368 aa		0.67	□□□□□ -2.3
snR45	snR45	AIM17	P23180	465 aa	Known RBP	0.66	□□□□□ -2.3
snR45	snR45	CRP1	P38845	465 aa	Known RBP	0.66	□□□□□ -2.3
snR45	snR45	BST1	P43571	1029 aa		0.66	□□□□□ -2.3
snR45	snR45	EEB1	Q02891	456 aa		0.66	□□□□□ -2.3
snR45	snR45	YLR225C	Q05948	407 aa	Known RBP	0.66	□□□□□ -2.3
snR45	snR45	IZH3	Q07959	543 aa		0.66	□□□□□ -2.3
snR45	snR45	HEM1	P09950	548 aa	Predicted RBP	0.65	□□□□□ -2.31
snR45	snR45	YMR085W	P0CF18	432 aa		0.65	□□□□□ -2.31
snR45	snR45	PMA2	P19657	947 aa		0.65	□□□□□ -2.31
snR45	snR45	PPZ1	P26570	692 aa		0.65	□□□□□ -2.31
snR45	snR45	PPH3	P32345	308 aa		0.65	□□□□□ -2.31
snR45	snR45	YIR016W	P40572	265 aa		0.65	□□□□□ -2.31
snR45	snR45	CCM1	P48237	864 aa	Predicted RBP	0.65	□□□□□ -2.31
snR45	snR45	NGL2	Q03264	515 aa	Known RBP	0.65	□□□□□ -2.31
snR45	snR45	SPO20	Q04359	397 aa		0.65	□□□□□ -2.31
snR45	snR45	YDL086W	Q07505	273 aa		0.65	□□□□□ -2.31
snR45	snR45	DSE3	Q08729	430 aa		0.65	□□□□□ -2.31
snR45	snR45	UBX3	Q12229	455 aa		0.65	□□□□□ -2.31
snR45	snR45	AIM44	Q99299	758 aa		0.65	□□□□□ -2.31
snR45	snR45	ADE8	P04161	214 aa		0.64	□□□□□ -2.31
snR45	snR45	LDB16	P25587	256 aa		0.64	□□□□□ -2.31
snR45	snR45	CYS3	P31373	394 aa	Known RBP	0.64	□□□□□ -2.31
snR45	snR45	TRZ1	P36159	838 aa	Predicted RBP	0.64	□□□□□ -2.31
snR45	snR45	APL3	P38065	1025 aa		0.64	□□□□□ -2.31
snR45	snR45	RPS26A	P39938	119 aa	Known RBP	0.64	□□□□□ -2.31
snR45	snR45	RPS26B	P39939	119 aa	Known RBP	0.64	□□□□□ -2.31
snR45	snR45	BSP1	Q06604	576 aa		0.64	□□□□□ -2.31
snR45	snR45	YOR022C	Q12204	715 aa		0.64	□□□□□ -2.31
snR45	snR45	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	0.64	□□□□□ -2.31	not detected
snR45	snR45	MON2	P48563	1636 aa	Predicted RBP	0.64	□□□□□ -2.31
snR45	snR45	RPC34	P32910	317 aa		0.63	□□□□□ -2.31
snR45	snR45	HSL7	P38274	827 aa		0.63	□□□□□ -2.31
snR45	snR45	YHR112C	P38716	378 aa		0.63	□□□□□ -2.31
snR45	snR45	YHR097C	P38809	366 aa	Known RBP	0.63	□□□□□ -2.31
snR45	snR45	OPT1	P40897	799 aa		0.63	□□□□□ -2.31
snR45	snR45	MTR3	P48240	250 aa	Predicted RBP	0.63	□□□□□ -2.31
snR45	snR45	IGO1	P53897	168 aa		0.63	□□□□□ -2.31
snR45	snR45	RKI1	Q12189	258 aa		0.63	□□□□□ -2.31
snR45	snR45	HRP1	Q99383	534 aa	Known RBP	0.63	□□□□□ -2.31
snR45	snR45	AQY1	P0CD91	305 aa		0.62	□□□□□ -2.31
snR45	snR45	APL2	P36000	726 aa	Predicted RBP	0.62	□□□□□ -2.31
snR45	snR45	PRP31	P49704	494 aa	Predicted RBP	0.62	□□□□□ -2.31
snR45	snR45	COP1	P53622	1201 aa	Known RBP	0.62	□□□□□ -2.31
snR45	snR45	VPS16	Q03308	798 aa		0.62	□□□□□ -2.31
snR45	snR45	YLR111W	Q12528	110 aa		0.62	□□□□□ -2.31
snR45	snR45	FMP27	Q06179	2628 aa		0.62	□□□□□ -2.31
snR45	snR45	SPA2	P23201	1466 aa	Known RBP	0.61	□□□□□ -2.31
snR45	snR45	RPL42A	P0CX27	106 aa	Known RBP	0.61	□□□□□ -2.31
snR45	snR45	RPL42B	P0CX28	106 aa	Known RBP	0.61	□□□□□ -2.31
snR45	snR45	DUT1	P33317	147 aa		0.61	□□□□□ -2.31
snR45	snR45	HES1	P35843	434 aa		0.61	□□□□□ -2.31
snR45	snR45	GND1	P38720	489 aa	Known RBP	0.61	□□□□□ -2.31
snR45	snR45	MBP1	P39678	833 aa		0.61	□□□□□ -2.31
snR45	snR45	SAD1	P43589	448 aa		0.61	□□□□□ -2.31
snR45	snR45	YBP2	P53169	641 aa		0.61	□□□□□ -2.31
snR45	snR45	YDR306C	Q06640	478 aa		0.61	□□□□□ -2.31
snR45	snR45	STP4	Q07351	490 aa		0.61	□□□□□ -2.31
snR45	snR45	NUM1	Q00402	2748 aa		0.6	□□□□□ -2.31
snR45	snR45	PRC1	P00729	532 aa		0.6	□□□□□ -2.31
snR45	snR45	RPL7A	P05737	244 aa	Known RBP	0.6	□□□□□ -2.31
snR45	snR45	RPS9B	P05755	195 aa	Known RBP	0.6	□□□□□ -2.31
snR45	snR45	TOP3	P13099	656 aa		0.6	□□□□□ -2.31
snR45	snR45	PRP28	P23394	588 aa		0.6	□□□□□ -2.31
snR45	snR45	CDC3	P32457	520 aa	Known RBP	0.6	□□□□□ -2.31
snR45	snR45	YRO2	P38079	344 aa		0.6	□□□□□ -2.31
snR45	snR45	SIT1	P39980	628 aa		0.6	□□□□□ -2.31
snR45	snR45	YSH1	Q06224	779 aa	Predicted RBP	0.6	□□□□□ -2.31
snR45	snR45	THI21	Q08975	551 aa		0.6	□□□□□ -2.31
snR45	snR45	RPL7B	Q12213	244 aa	Known RBP	0.6	□□□□□ -2.31
snR45	snR45	WHI5	Q12416	295 aa		0.6	□□□□□ -2.31
snR45	snR45	INO80	P53115	1489 aa		0.6	□□□□□ -2.31
snR45	snR45	GCN1	P33892	2672 aa	Known RBP	0.59	□□□□□ -2.31
snR45	snR45	ERG20	P08524	352 aa	Known RBP	0.59	□□□□□ -2.31
snR45	snR45	RAD18	P10862	487 aa		0.59	□□□□□ -2.31
snR45	snR45	GSY2	P27472	705 aa		0.59	□□□□□ -2.31
snR45	snR45	LOT5	P34234	306 aa		0.59	□□□□□ -2.31
snR45	snR45	APT2	P36973	181 aa		0.59	□□□□□ -2.31
snR45	snR45	CTP1	P38152	299 aa		0.59	□□□□□ -2.31
snR45	snR45	GET2	P40056	285 aa		0.59	□□□□□ -2.31
snR45	snR45	YJL043W	P47053	257 aa		0.59	□□□□□ -2.31
snR45	snR45	NOG2	P53742	486 aa	Known RBP	0.59	□□□□□ -2.31
snR45	snR45	BUL2	Q03758	920 aa	Known RBP	0.59	□□□□□ -2.31
snR45	snR45	MCM21	Q06675	368 aa		0.59	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms