RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	TSA1	P34760	196 aa	Known RBP	3.77	□□□□□ -1.81
snR35	snR35	RIM4	P38741	713 aa		3.77	□□□□□ -1.81
snR35	snR35	PMC1	P38929	1173 aa	Predicted RBP	3.77	□□□□□ -1.81
snR35	snR35	RRP8	P38961	392 aa	Known RBP	3.77	□□□□□ -1.81
snR35	snR35	MSS4	P38994	779 aa		3.77	□□□□□ -1.81
snR35	snR35	PLB1	P39105	664 aa		3.77	□□□□□ -1.81
snR35	snR35	IES1	P43579	692 aa		3.77	□□□□□ -1.81
snR35	snR35	TAN1	P53072	289 aa	Predicted RBP	3.77	□□□□□ -1.81
snR35	snR35	CNM67	P53865	581 aa	Known RBP	3.77	□□□□□ -1.81
snR35	snR35	SUB1	P54000	292 aa	Known RBP	3.77	□□□□□ -1.81
snR35	snR35	LEE1	Q02799	301 aa	Known RBP	3.77	□□□□□ -1.81
snR35	snR35	HMO1	Q03973	246 aa	Known RBP	3.77	□□□□□ -1.81
snR35	snR35	YLR407W	Q06070	228 aa		3.77	□□□□□ -1.81
snR35	snR35	CDA2	Q06703	312 aa		3.77	□□□□□ -1.81
snR35	snR35	ENB1	Q08299	606 aa		3.77	□□□□□ -1.81
snR35	snR35	GAL1	P04385	528 aa		3.76	□□□□□ -1.81
snR35	snR35	PYC1	P11154	1178 aa	Known RBP	3.76	□□□□□ -1.81
snR35	snR35	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
snR35	snR35	ADE2	P21264	571 aa	Known RBP	3.76	□□□□□ -1.81
snR35	snR35	IMG2	P25642	146 aa	Predicted RBP	3.76	□□□□□ -1.81
snR35	snR35	PET127	P32606	800 aa		3.76	□□□□□ -1.81
snR35	snR35	MAC1	P35192	417 aa		3.76	□□□□□ -1.81
snR35	snR35	CTF13	P35203	478 aa		3.76	□□□□□ -1.81
snR35	snR35	SRP68	P38687	599 aa	Known RBP	3.76	□□□□□ -1.81
snR35	snR35	VID28	P40547	921 aa		3.76	□□□□□ -1.81
snR35	snR35	EXG2	P52911	562 aa		3.76	□□□□□ -1.81
snR35	snR35	PRP43	P53131	767 aa	Known RBP	3.76	□□□□□ -1.81
snR35	snR35	SLU7	Q02775	382 aa	Known RBP	3.76	□□□□□ -1.81
snR35	snR35	NRG1	Q03125	231 aa		3.76	□□□□□ -1.81
snR35	snR35	ATG11	Q12527	1178 aa		3.76	□□□□□ -1.81
snR35	snR35	PIF1	P07271	859 aa		3.75	□□□□□ -1.81
snR35	snR35	PGI1	P12709	554 aa	Known RBP	3.75	□□□□□ -1.81
snR35	snR35	GLN4	P13188	809 aa	Known RBP	3.75	□□□□□ -1.81
snR35	snR35	CDC26	P14724	124 aa		3.75	□□□□□ -1.81
snR35	snR35	PRP6	P19735	899 aa	Predicted RBP	3.75	□□□□□ -1.81
snR35	snR35	KAR4	P25583	335 aa		3.75	□□□□□ -1.81
snR35	snR35	AIM3	P38266	947 aa	Known RBP	3.75	□□□□□ -1.81
snR35	snR35	RPP1	P38786	293 aa		3.75	□□□□□ -1.81
snR35	snR35	NSE5	Q03718	556 aa		3.75	□□□□□ -1.81
snR35	snR35	ATG16	Q03818	150 aa		3.75	□□□□□ -1.81
snR35	snR35	PPN1	Q04119	674 aa		3.75	□□□□□ -1.81
snR35	snR35	GAD1	Q04792	585 aa		3.75	□□□□□ -1.81
snR35	snR35	HOP1	P20050	605 aa		3.74	□□□□□ -1.81
snR35	snR35	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
snR35	snR35	ATP12	P22135	325 aa		3.74	□□□□□ -1.81
snR35	snR35	GAS1	P22146	559 aa	Known RBP	3.74	□□□□□ -1.81
snR35	snR35	DGR2	P32330	852 aa		3.74	□□□□□ -1.81
snR35	snR35	MF(ALPHA)2	P32435	120 aa		3.74	□□□□□ -1.81
snR35	snR35	PTH2	P34222	208 aa		3.74	□□□□□ -1.81
snR35	snR35	SEG2	P34250	1132 aa		3.74	□□□□□ -1.81
snR35	snR35	KTR4	P38131	464 aa		3.74	□□□□□ -1.81
snR35	snR35	FUI1	P38196	639 aa		3.74	□□□□□ -1.81
snR35	snR35	DUN1	P39009	513 aa		3.74	□□□□□ -1.81
snR35	snR35	SSP120	P39931	234 aa	Known RBP	3.74	□□□□□ -1.81
snR35	snR35	IES5	P40060	125 aa		3.74	□□□□□ -1.81
snR35	snR35	IRC5	P43610	853 aa		3.74	□□□□□ -1.81
snR35	snR35	PUS4	P48567	403 aa	Known RBP	3.74	□□□□□ -1.81
snR35	snR35	ECM38	Q05902	660 aa	Predicted RBP	3.74	□□□□□ -1.81
snR35	snR35	YPS7	Q06325	596 aa		3.74	□□□□□ -1.81
snR35	snR35	ISA1	Q07821	250 aa	Predicted RBP	3.74	□□□□□ -1.81
snR35	snR35	VHS3	Q08438	674 aa		3.74	□□□□□ -1.81
snR35	snR35	ERG20	P08524	352 aa	Known RBP	3.73	□□□□□ -1.81
snR35	snR35	FRS1	P15624	595 aa	Known RBP	3.73	□□□□□ -1.81
snR35	snR35	IME1	P21190	360 aa		3.73	□□□□□ -1.81
snR35	snR35	HXT4	P32467	576 aa		3.73	□□□□□ -1.81
snR35	snR35	YPT7	P32939	208 aa		3.73	□□□□□ -1.81
snR35	snR35	SDS22	P36047	338 aa		3.73	□□□□□ -1.81
snR35	snR35	YHR112C	P38716	378 aa		3.73	□□□□□ -1.81
snR35	snR35	YGR021W	P53212	290 aa		3.73	□□□□□ -1.81
snR35	snR35	ERG5	P54781	538 aa		3.73	□□□□□ -1.81
snR35	snR35	MTD1	Q02046	320 aa	Known RBP	3.73	□□□□□ -1.81
snR35	snR35	STP4	Q07351	490 aa		3.73	□□□□□ -1.81
snR35	snR35	NGL1	Q08213	363 aa	Known RBP	3.73	□□□□□ -1.81
snR35	snR35	SGO1	Q08490	590 aa		3.73	□□□□□ -1.81
snR35	snR35	TGL5	Q12043	749 aa		3.73	□□□□□ -1.81
snR35	snR35	PSF3	Q12146	194 aa		3.73	□□□□□ -1.81
snR35	snR35	TRP4	P07285	380 aa	Predicted RBP	3.72	□□□□□ -1.81
snR35	snR35	PFK1	P16861	987 aa	Known RBP	3.72	□□□□□ -1.81
snR35	snR35	RNR1	P21524	888 aa	Known RBP	3.72	□□□□□ -1.81
snR35	snR35	PRP22	P24384	1145 aa	Known RBP	3.72	□□□□□ -1.81
snR35	snR35	CAD1	P24813	409 aa	Known RBP	3.72	□□□□□ -1.81
snR35	snR35	LST4	P34239	828 aa		3.72	□□□□□ -1.81
snR35	snR35	SAW1	P39735	261 aa		3.72	□□□□□ -1.81
snR35	snR35	STL1	P39932	569 aa		3.72	□□□□□ -1.81
snR35	snR35	YIR042C	P40586	236 aa		3.72	□□□□□ -1.81
snR35	snR35	AMA1	P50082	593 aa		3.72	□□□□□ -1.81
snR35	snR35	MNN10	P50108	393 aa	Known RBP	3.72	□□□□□ -1.81
snR35	snR35	TEX1	P53851	422 aa	Known RBP	3.72	□□□□□ -1.81
snR35	snR35	CTK1	Q03957	528 aa	Known RBP	3.72	□□□□□ -1.81
snR35	snR35	VBA4	Q04602	768 aa	Known RBP	3.72	□□□□□ -1.81
snR35	snR35	OMS1	Q06668	471 aa		3.72	□□□□□ -1.81
snR35	snR35	PSR2	Q07949	397 aa		3.72	□□□□□ -1.81
snR35	snR35	CWC2	Q12046	339 aa	Predicted RBP	3.72	□□□□□ -1.81
snR35	snR35	GLT1	Q12680	2145 aa	Known RBP	3.71	□□□□□ -1.81
snR35	snR35	YLR358C	O13565	187 aa		3.71	□□□□□ -1.82
snR35	snR35	MET3	P08536	511 aa		3.71	□□□□□ -1.82
snR35	snR35	YEL076C-A	P0CX16	216 aa		3.71	□□□□□ -1.82
snR35	snR35	YLR464W	P0CX17	216 aa		3.71	□□□□□ -1.82
snR35	snR35	LAT1	P12695	482 aa	Known RBP	3.71	□□□□□ -1.82
snR35	snR35	PHO81	P17442	1178 aa		3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 97.3 ms