RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR11, Length 258 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR11	snR11	NUP60	P39705	539 aa		4.74	□□□□□ -1.65
snR11	snR11	NUG1	P40010	520 aa	Known RBP	4.74	□□□□□ -1.65
snR11	snR11	RET2	P43621	546 aa		4.74	□□□□□ -1.65
snR11	snR11	HLJ1	P48353	224 aa		4.74	□□□□□ -1.65
snR11	snR11	TIM44	Q01852	431 aa		4.74	□□□□□ -1.65
snR11	snR11	THI73	Q07904	523 aa		4.74	□□□□□ -1.65
snR11	snR11	HIS7	P33734	552 aa	Known RBP	4.73	□□□□□ -1.65
snR11	snR11	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
snR11	snR11	CKB2	P38930	258 aa		4.73	□□□□□ -1.65
snR11	snR11	SDS3	P40505	327 aa		4.73	□□□□□ -1.65
snR11	snR11	NOP9	P47077	666 aa	Known RBP	4.73	□□□□□ -1.65
snR11	snR11	YNR029C	P53729	429 aa	Known RBP	4.73	□□□□□ -1.65
snR11	snR11	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
snR11	snR11	MAL31	P38156	614 aa		4.72	□□□□□ -1.65
snR11	snR11	YNL195C	P40168	261 aa		4.72	□□□□□ -1.65
snR11	snR11	PAN2	P53010	1115 aa	Predicted RBP	4.72	□□□□□ -1.65
snR11	snR11	GPG1	P53130	126 aa		4.72	□□□□□ -1.65
snR11	snR11	FHN1	P53279	174 aa		4.72	□□□□□ -1.65
snR11	snR11	MTQ2	Q03920	221 aa	Predicted RBP	4.72	□□□□□ -1.65
snR11	snR11	THI22	Q06490	572 aa		4.72	□□□□□ -1.65
snR11	snR11	HBT1	Q07653	1046 aa	Known RBP	4.72	□□□□□ -1.65
snR11	snR11	YKL033W-A	Q86ZR7	236 aa		4.72	□□□□□ -1.65
snR11	snR11	ECM3	Q99252	613 aa		4.72	□□□□□ -1.65
snR11	snR11	PEX1	P24004	1043 aa		4.71	□□□□□ -1.66
snR11	snR11	MVD1	P32377	396 aa	Known RBP	4.71	□□□□□ -1.66
snR11	snR11	SEC6	P32844	805 aa		4.71	□□□□□ -1.66
snR11	snR11	MTH1	P35198	433 aa		4.71	□□□□□ -1.66
snR11	snR11	TYS1	P36421	394 aa	Known RBP	4.71	□□□□□ -1.66
snR11	snR11	TDA3	P38758	523 aa		4.71	□□□□□ -1.66
snR11	snR11	PCL5	P38794	229 aa		4.71	□□□□□ -1.66
snR11	snR11	YHR202W	P38887	602 aa		4.71	□□□□□ -1.66
snR11	snR11	REV7	P38927	245 aa		4.71	□□□□□ -1.66
snR11	snR11	PMT3	P47190	753 aa		4.71	□□□□□ -1.66
snR11	snR11	UBA2	P52488	636 aa		4.71	□□□□□ -1.66
snR11	snR11	YAP1802	P53309	568 aa		4.71	□□□□□ -1.66
snR11	snR11	GPD1	Q00055	391 aa	Known RBP	4.71	□□□□□ -1.66
snR11	snR11	UME1	Q03010	460 aa		4.71	□□□□□ -1.66
snR11	snR11	NUP145	P49687	1317 aa		4.71	□□□□□ -1.66
snR11	snR11	SWI6	P09959	803 aa		4.7	□□□□□ -1.66
snR11	snR11	IMG2	P25642	146 aa	Predicted RBP	4.7	□□□□□ -1.66
snR11	snR11	PRP19	P32523	503 aa	Known RBP	4.7	□□□□□ -1.66
snR11	snR11	YPT7	P32939	208 aa		4.7	□□□□□ -1.66
snR11	snR11	SFB3	P38810	929 aa		4.7	□□□□□ -1.66
snR11	snR11	CRP1	P38845	465 aa	Known RBP	4.7	□□□□□ -1.66
snR11	snR11	CCT5	P40413	562 aa	Known RBP	4.7	□□□□□ -1.66
snR11	snR11	RSC8	P43609	557 aa	Known RBP	4.7	□□□□□ -1.66
snR11	snR11	GND2	P53319	492 aa		4.7	□□□□□ -1.66
snR11	snR11	SMX3	P54999	86 aa	Predicted RBP	4.7	□□□□□ -1.66
snR11	snR11	PHO11	P35842	467 aa		4.69	□□□□□ -1.66
snR11	snR11	PHO12	P38693	467 aa		4.69	□□□□□ -1.66
snR11	snR11	QRI1	P43123	477 aa	Known RBP	4.69	□□□□□ -1.66
snR11	snR11	YGR153W	P48238	217 aa		4.69	□□□□□ -1.66
snR11	snR11	COX18	P53239	316 aa		4.69	□□□□□ -1.66
snR11	snR11	SSL2	Q00578	843 aa		4.69	□□□□□ -1.66
snR11	snR11	VPS36	Q06696	566 aa		4.69	□□□□□ -1.66
snR11	snR11	IRC10	Q08118	586 aa		4.69	□□□□□ -1.66
snR11	snR11	PET127	P32606	800 aa		4.68	□□□□□ -1.66
snR11	snR11	YKU70	P32807	602 aa		4.68	□□□□□ -1.66
snR11	snR11	BIT2	P38346	545 aa		4.68	□□□□□ -1.66
snR11	snR11	HXT6	P39003	570 aa	Known RBP	4.68	□□□□□ -1.66
snR11	snR11	HXT7	P39004	570 aa		4.68	□□□□□ -1.66
snR11	snR11	GZF3	P42944	551 aa	Known RBP	4.68	□□□□□ -1.66
snR11	snR11	YGL081W	P53156	320 aa		4.68	□□□□□ -1.66
snR11	snR11	ECM9	Q02202	377 aa		4.68	□□□□□ -1.66
snR11	snR11	RCR2	Q03446	210 aa	Known RBP	4.68	□□□□□ -1.66
snR11	snR11	YLR407W	Q06070	228 aa		4.68	□□□□□ -1.66
snR11	snR11	ISA1	Q07821	250 aa	Predicted RBP	4.68	□□□□□ -1.66
snR11	snR11	THR1	P17423	357 aa	Known RBP	4.67	□□□□□ -1.66
snR11	snR11	YKR075C	P36155	307 aa		4.67	□□□□□ -1.66
snR11	snR11	OAF1	P39720	1047 aa	Predicted RBP	4.67	□□□□□ -1.66
snR11	snR11	GPP1	P41277	250 aa	Known RBP	4.67	□□□□□ -1.66
snR11	snR11	MLH3	Q12083	715 aa		4.67	□□□□□ -1.66
snR11	snR11	MRH1	Q12117	320 aa	Predicted RBP	4.67	□□□□□ -1.66
snR11	snR11	CLF1	Q12309	687 aa	Predicted RBP	4.67	□□□□□ -1.66
snR11	snR11	RPS21B	Q3E754	87 aa	Known RBP	4.67	□□□□□ -1.66
snR11	snR11	APM4	Q99186	491 aa		4.67	□□□□□ -1.66
snR11	snR11	ERG20	P08524	352 aa	Known RBP	4.66	□□□□□ -1.66
snR11	snR11	FRS1	P15624	595 aa	Known RBP	4.66	□□□□□ -1.66
snR11	snR11	IME1	P21190	360 aa		4.66	□□□□□ -1.66
snR11	snR11	BCS1	P32839	456 aa		4.66	□□□□□ -1.66
snR11	snR11	UBP12	P39538	1254 aa		4.66	□□□□□ -1.66
snR11	snR11	NDC80	P40460	691 aa		4.66	□□□□□ -1.66
snR11	snR11	CCT7	P42943	550 aa	Known RBP	4.66	□□□□□ -1.66
snR11	snR11	BIT61	P47041	543 aa		4.66	□□□□□ -1.66
snR11	snR11	YGR237C	P50089	785 aa		4.66	□□□□□ -1.66
snR11	snR11	YPS7	Q06325	596 aa		4.66	□□□□□ -1.66
snR11	snR11	VHS3	Q08438	674 aa		4.66	□□□□□ -1.66
snR11	snR11	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
snR11	snR11	TAF3	Q12297	353 aa		4.66	□□□□□ -1.66
snR11	snR11	TAD3	Q9URQ3	322 aa		4.66	□□□□□ -1.66
snR11	snR11	OAF3	P36023	863 aa		4.65	□□□□□ -1.67
snR11	snR11	UBS1	P38290	277 aa		4.65	□□□□□ -1.67
snR11	snR11	CBR1	P38626	284 aa	Known RBP	4.65	□□□□□ -1.67
snR11	snR11	STU2	P46675	888 aa		4.65	□□□□□ -1.67
snR11	snR11	DIA2	Q08496	732 aa	Predicted RBP	4.65	□□□□□ -1.67
snR11	snR11	YTM1	Q12024	460 aa	Predicted RBP	4.65	□□□□□ -1.67
snR11	snR11	HFI1	Q12060	488 aa		4.65	□□□□□ -1.67
snR11	snR11	CHS5	Q12114	671 aa	Known RBP	4.65	□□□□□ -1.67
snR11	snR11	ZRT2	Q12436	422 aa		4.65	□□□□□ -1.67
snR11	snR11	POM34	Q12445	299 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms