RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	YLR415C	O13578	112 aa		5.04	□□□□□ -1.6
YTM1	YOR272W	TRP4	P07285	380 aa	Predicted RBP	5.04	□□□□□ -1.6
YTM1	YOR272W	HMG1	P12683	1054 aa		5.04	□□□□□ -1.6
YTM1	YOR272W	MIH1	P23748	554 aa		5.04	□□□□□ -1.6
YTM1	YOR272W	YKR018C	P36114	725 aa		5.04	□□□□□ -1.6
YTM1	YOR272W	GIP4	P39732	760 aa		5.04	□□□□□ -1.6
YTM1	YOR272W	TAF1	P46677	1066 aa		5.04	□□□□□ -1.6
YTM1	YOR272W	ORC4	P54791	529 aa		5.04	□□□□□ -1.6
YTM1	YOR272W	THI73	Q07904	523 aa		5.04	□□□□□ -1.6
YTM1	YOR272W	PRP4	P20053	465 aa	Known RBP	5.03	□□□□□ -1.6
YTM1	YOR272W	YCR015C	P25616	317 aa		5.03	□□□□□ -1.6
YTM1	YOR272W	CCR4	P31384	837 aa	Known RBP	5.03	□□□□□ -1.6
YTM1	YOR272W	YKR051W	P36142	418 aa		5.03	□□□□□ -1.6
YTM1	YOR272W	YBR259W	P38338	688 aa		5.03	□□□□□ -1.6
YTM1	YOR272W	TCB2	P48231	1178 aa		5.03	□□□□□ -1.6
YTM1	YOR272W	YBP2	P53169	641 aa		5.03	□□□□□ -1.6
YTM1	YOR272W	NTO1	Q12311	748 aa		5.03	□□□□□ -1.6
YTM1	YOR272W	LAS17	Q12446	633 aa		5.03	□□□□□ -1.6
YTM1	YOR272W	YKL222C	P35995	705 aa		5.02	□□□□□ -1.61
YTM1	YOR272W	MIP6	P38760	659 aa	Known RBP	5.02	□□□□□ -1.61
YTM1	YOR272W	UBC9	P50623	157 aa	Predicted RBP	5.02	□□□□□ -1.61
YTM1	YOR272W	PHO23	P50947	330 aa		5.02	□□□□□ -1.61
YTM1	YOR272W	PCL10	P53124	433 aa		5.02	□□□□□ -1.61
YTM1	YOR272W	ERG5	P54781	538 aa		5.02	□□□□□ -1.61
YTM1	YOR272W	AIM39	Q08223	395 aa		5.02	□□□□□ -1.61
YTM1	YOR272W	GPR1	Q12361	961 aa		5.02	□□□□□ -1.61
YTM1	YOR272W	Q0142	Q9ZZW4	58 aa		5.02	□□□□□ -1.61
YTM1	YOR272W	TRM2	P33753	639 aa		5.01	□□□□□ -1.61
YTM1	YOR272W	TYS1	P36421	394 aa	Known RBP	5.01	□□□□□ -1.61
YTM1	YOR272W	CKB2	P38930	258 aa		5.01	□□□□□ -1.61
YTM1	YOR272W	YFR016C	P43597	1233 aa	Known RBP	5.01	□□□□□ -1.61
YTM1	YOR272W	UME1	Q03010	460 aa		5.01	□□□□□ -1.61
YTM1	YOR272W	NRG1	Q03125	231 aa		5.01	□□□□□ -1.61
YTM1	YOR272W	NUP145	P49687	1317 aa		5.01	□□□□□ -1.61
YTM1	YOR272W	PMI40	P29952	429 aa	Known RBP	5	□□□□□ -1.61
YTM1	YOR272W	DEF1	P35732	738 aa	Known RBP	5	□□□□□ -1.61
YTM1	YOR272W	SIC1	P38634	284 aa		5	□□□□□ -1.61
YTM1	YOR272W	ECM1	P39715	212 aa		5	□□□□□ -1.61
YTM1	YOR272W	PRP31	P49704	494 aa	Predicted RBP	5	□□□□□ -1.61
YTM1	YOR272W	YGR237C	P50089	785 aa		5	□□□□□ -1.61
YTM1	YOR272W	ASM4	Q05166	528 aa		5	□□□□□ -1.61
YTM1	YOR272W	NUP157	P40064	1391 aa	Known RBP	5	□□□□□ -1.61
YTM1	YOR272W	MET3	P08536	511 aa		4.99	□□□□□ -1.61
YTM1	YOR272W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
YTM1	YOR272W	EFT1	P32324	842 aa	Known RBP	4.99	□□□□□ -1.61
YTM1	YOR272W	PRP19	P32523	503 aa	Known RBP	4.99	□□□□□ -1.61
YTM1	YOR272W	KTR4	P38131	464 aa		4.99	□□□□□ -1.61
YTM1	YOR272W	UBP12	P39538	1254 aa		4.99	□□□□□ -1.61
YTM1	YOR272W	FKH2	P41813	862 aa		4.99	□□□□□ -1.61
YTM1	YOR272W	AMA1	P50082	593 aa		4.99	□□□□□ -1.61
YTM1	YOR272W	DLT1	Q04216	342 aa		4.99	□□□□□ -1.61
YTM1	YOR272W	HFD1	Q04458	532 aa		4.99	□□□□□ -1.61
YTM1	YOR272W	HRR25	P29295	494 aa	Known RBP	4.98	□□□□□ -1.61
YTM1	YOR272W	MAL31	P38156	614 aa		4.98	□□□□□ -1.61
YTM1	YOR272W	YJR096W	P47137	282 aa		4.98	□□□□□ -1.61
YTM1	YOR272W	ARO1	P08566	1588 aa	Known RBP	4.98	□□□□□ -1.61
YTM1	YOR272W	YBT1	P32386	1661 aa		4.98	□□□□□ -1.61
YTM1	YOR272W	CAF20	P12962	161 aa	Known RBP	4.97	□□□□□ -1.61
YTM1	YOR272W	ERG4	P25340	473 aa		4.97	□□□□□ -1.61
YTM1	YOR272W	GRX4	P32642	244 aa		4.97	□□□□□ -1.61
YTM1	YOR272W	MNN4	P36044	1178 aa		4.97	□□□□□ -1.61
YTM1	YOR272W	APT2	P36973	181 aa		4.97	□□□□□ -1.61
YTM1	YOR272W	BUL1	P48524	976 aa		4.97	□□□□□ -1.61
YTM1	YOR272W	MRPS35	P53292	345 aa		4.97	□□□□□ -1.61
YTM1	YOR272W	GPD1	Q00055	391 aa	Known RBP	4.97	□□□□□ -1.61
YTM1	YOR272W	MTQ2	Q03920	221 aa	Predicted RBP	4.97	□□□□□ -1.61
YTM1	YOR272W	FAP7	Q12055	197 aa	Predicted RBP	4.97	□□□□□ -1.61
YTM1	YOR272W	ATG11	Q12527	1178 aa		4.97	□□□□□ -1.61
YTM1	YOR272W	DNF3	Q12674	1656 aa		4.97	□□□□□ -1.61
YTM1	YOR272W	CAT8	P39113	1433 aa		4.96	□□□□□ -1.62
YTM1	YOR272W	SPT7	P35177	1332 aa		4.96	□□□□□ -1.62
YTM1	YOR272W	TUB2	P02557	457 aa	Known RBP	4.96	□□□□□ -1.62
YTM1	YOR272W	APL2	P36000	726 aa	Predicted RBP	4.96	□□□□□ -1.62
YTM1	YOR272W	TDA3	P38758	523 aa		4.96	□□□□□ -1.62
YTM1	YOR272W	SSZ1	P38788	538 aa	Known RBP	4.96	□□□□□ -1.62
YTM1	YOR272W	ELO3	P40319	345 aa		4.96	□□□□□ -1.62
YTM1	YOR272W	RET2	P43621	546 aa		4.96	□□□□□ -1.62
YTM1	YOR272W	BFA1	P47113	574 aa		4.96	□□□□□ -1.62
YTM1	YOR272W	ARG5,6	Q01217	863 aa		4.96	□□□□□ -1.62
YTM1	YOR272W	GAD1	Q04792	585 aa		4.96	□□□□□ -1.62
YTM1	YOR272W	YTM1	Q12024	460 aa	Predicted RBP	4.96	□□□□□ -1.62
YTM1	YOR272W	LAT1	P12695	482 aa	Known RBP	4.95	□□□□□ -1.62
YTM1	YOR272W	CLC1	P17891	233 aa		4.95	□□□□□ -1.62
YTM1	YOR272W	TSR4	P25040	408 aa		4.95	□□□□□ -1.62
YTM1	YOR272W	PRS1	P32895	427 aa	Known RBP	4.95	□□□□□ -1.62
YTM1	YOR272W	YIR042C	P40586	236 aa		4.95	□□□□□ -1.62
YTM1	YOR272W	GZF3	P42944	551 aa	Known RBP	4.95	□□□□□ -1.62
YTM1	YOR272W	YJR039W	P47107	1121 aa		4.95	□□□□□ -1.62
YTM1	YOR272W	GPG1	P53130	126 aa		4.95	□□□□□ -1.62
YTM1	YOR272W	RNT1	Q02555	471 aa		4.95	□□□□□ -1.62
YTM1	YOR272W	REC102	Q02721	264 aa		4.95	□□□□□ -1.62
YTM1	YOR272W	GSF2	Q04697	403 aa	Known RBP	4.95	□□□□□ -1.62
YTM1	YOR272W	MCM21	Q06675	368 aa		4.95	□□□□□ -1.62
YTM1	YOR272W	TGL5	Q12043	749 aa		4.95	□□□□□ -1.62
YTM1	YOR272W	SEC7	P11075	2009 aa	Known RBP	4.95	□□□□□ -1.62
YTM1	YOR272W	ADE2	P21264	571 aa	Known RBP	4.94	□□□□□ -1.62
YTM1	YOR272W	TRZ1	P36159	838 aa	Predicted RBP	4.94	□□□□□ -1.62
YTM1	YOR272W	YEN1	P40028	759 aa		4.94	□□□□□ -1.62
YTM1	YOR272W	GID8	P40208	455 aa		4.94	□□□□□ -1.62
YTM1	YOR272W	SET2	P46995	733 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms