RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C ERO1Q03103 563 aa5.58□□□□□ -1.52
RAT1YOR048C YMR027WQ04371 470 aa5.58□□□□□ -1.52
RAT1YOR048C EMP46Q12396 444 aa5.58□□□□□ -1.52
RAT1YOR048C RPL4AP10664 362 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C PEP5P12868 1029 aa5.58□□□□□ -1.52
RAT1YOR048C RNR1P21524 888 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C DGR2P32330 852 aa5.58□□□□□ -1.52
RAT1YOR048C SAK1P38990 1142 aa5.58□□□□□ -1.52
RAT1YOR048C RPL4BP49626 362 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C COG6P53959 839 aa5.58□□□□□ -1.52
RAT1YOR048C YDR476CQ03362 224 aa5.58□□□□□ -1.52
RAT1YOR048C FUS2Q05670 677 aa5.58□□□□□ -1.52
RAT1YOR048C FAR10Q06001 478 aa5.58□□□□□ -1.52
RAT1YOR048C APC9Q12107 265 aa5.58□□□□□ -1.52
RAT1YOR048C OCA6Q12454 224 aa5.58□□□□□ -1.52
RAT1YOR048C HPR1P17629 752 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C PRP22P24384 1145 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C ADY2P25613 283 aa5.58□□□□□ -1.52
RAT1YOR048C CDC20P26309 610 aa5.58□□□□□ -1.52
RAT1YOR048C SUV3P32580 737 aa5.58□□□□□ -1.52
RAT1YOR048C ATG19P35193 415 aa5.58□□□□□ -1.52
RAT1YOR048C YBL086CP38177 466 aa5.58□□□□□ -1.52
RAT1YOR048C PSY2P40164 858 aa5.58□□□□□ -1.52
RAT1YOR048C YIL001WP40560 513 aa5.58□□□□□ -1.52
RAT1YOR048C AIM21P40563 679 aa5.58□□□□□ -1.52
RAT1YOR048C HOP2P53187 214 aa5.58□□□□□ -1.52
RAT1YOR048C MTG1Q03151 367 aaPredicted RBP5.58□□□□□ -1.52
RAT1YOR048C OYE2Q03558 400 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C ADE13Q05911 482 aaKnown RBP5.58□□□□□ -1.52
RAT1YOR048C YET3Q07451 203 aa5.58□□□□□ -1.52
RAT1YOR048C PCL8Q08966 492 aa5.58□□□□□ -1.52
RAT1YOR048C YPT6Q99260 215 aa5.58□□□□□ -1.52
RAT1YOR048C ARD1P07347 238 aaPredicted RBP5.57□□□□□ -1.52
RAT1YOR048C MRM1P25270 412 aa5.57□□□□□ -1.52
RAT1YOR048C PEP12P32854 288 aa5.57□□□□□ -1.52
RAT1YOR048C SEC66P33754 206 aa5.57□□□□□ -1.52
RAT1YOR048C ECM4P36156 370 aa5.57□□□□□ -1.52
RAT1YOR048C UTP7P40055 554 aaKnown RBP5.57□□□□□ -1.52
RAT1YOR048C SDS3P40505 327 aa5.57□□□□□ -1.52
RAT1YOR048C PXA1P41909 870 aa5.57□□□□□ -1.52
RAT1YOR048C YMR160WQ03823 816 aa5.57□□□□□ -1.52
RAT1YOR048C MDM38Q08179 573 aa5.57□□□□□ -1.52
RAT1YOR048C HIF1Q12373 385 aa5.57□□□□□ -1.52
RAT1YOR048C SEM1O94742 89 aa5.57□□□□□ -1.52
RAT1YOR048C BI2P03873 423 aa5.57□□□□□ -1.52
RAT1YOR048C BI4P03879 638 aa5.57□□□□□ -1.52
RAT1YOR048C SRO9P25567 434 aaKnown RBP5.57□□□□□ -1.52
RAT1YOR048C SEG2P34250 1132 aa5.57□□□□□ -1.52
RAT1YOR048C FLC2P39719 783 aa5.57□□□□□ -1.52
RAT1YOR048C INP52P50942 1183 aa5.57□□□□□ -1.52
RAT1YOR048C MDR1P53258 950 aa5.57□□□□□ -1.52
RAT1YOR048C ESBP6P53918 673 aa5.57□□□□□ -1.52
RAT1YOR048C ACK1Q07622 623 aaPredicted RBP5.57□□□□□ -1.52
RAT1YOR048C REC8Q12188 680 aa5.57□□□□□ -1.52
RAT1YOR048C BI3Q9ZZW7 517 aa5.57□□□□□ -1.52
RAT1YOR048C RAD18P10862 487 aa5.56□□□□□ -1.52
RAT1YOR048C PYC2P32327 1180 aaKnown RBP5.56□□□□□ -1.52
RAT1YOR048C IRE1P32361 1115 aa5.56□□□□□ -1.52
RAT1YOR048C SWI3P32591 825 aa5.56□□□□□ -1.52
RAT1YOR048C PGM1P33401 570 aaKnown RBP5.56□□□□□ -1.52
RAT1YOR048C CSG2P35206 410 aa5.56□□□□□ -1.52
RAT1YOR048C QNS1P38795 714 aaKnown RBP5.56□□□□□ -1.52
RAT1YOR048C SIT1P39980 628 aa5.56□□□□□ -1.52
RAT1YOR048C RIO2P40160 425 aaKnown RBP5.56□□□□□ -1.52
RAT1YOR048C MAF1P41910 395 aa5.56□□□□□ -1.52
RAT1YOR048C EEB1Q02891 456 aa5.56□□□□□ -1.52
RAT1YOR048C PSF3Q12146 194 aa5.56□□□□□ -1.52
RAT1YOR048C HSF1P10961 833 aa5.56□□□□□ -1.52
RAT1YOR048C PHO8P11491 566 aa5.56□□□□□ -1.52
RAT1YOR048C RAD51P25454 400 aa5.56□□□□□ -1.52
RAT1YOR048C BCS1P32839 456 aa5.56□□□□□ -1.52
RAT1YOR048C RPC37P36121 282 aa5.56□□□□□ -1.52
RAT1YOR048C POP4P38336 279 aa5.56□□□□□ -1.52
RAT1YOR048C APM2P38700 605 aa5.56□□□□□ -1.52
RAT1YOR048C RIX1P38883 763 aaPredicted RBP5.56□□□□□ -1.52
RAT1YOR048C ROG3P43602 733 aa5.56□□□□□ -1.52
RAT1YOR048C IST1P53843 298 aaPredicted RBP5.56□□□□□ -1.52
RAT1YOR048C ALD6P54115 500 aaKnown RBP5.56□□□□□ -1.52
RAT1YOR048C SHR3Q02774 210 aa5.56□□□□□ -1.52
RAT1YOR048C YMR074CQ04773 145 aa5.56□□□□□ -1.52
RAT1YOR048C YSH1Q06224 779 aaPredicted RBP5.56□□□□□ -1.52
RAT1YOR048C ZPS1Q12512 249 aa5.56□□□□□ -1.52
RAT1YOR048C TUB1P09733 447 aaKnown RBP5.56□□□□□ -1.52
RAT1YOR048C UGA4P32837 571 aa5.56□□□□□ -1.52
RAT1YOR048C PIK1P39104 1066 aa5.56□□□□□ -1.52
RAT1YOR048C YJL206CP39529 758 aa5.56□□□□□ -1.52
RAT1YOR048C SAW1P39735 261 aa5.56□□□□□ -1.52
RAT1YOR048C YJL171CP46992 396 aa5.56□□□□□ -1.52
RAT1YOR048C VID30P53076 958 aa5.56□□□□□ -1.52
RAT1YOR048C LIF1P53150 421 aa5.56□□□□□ -1.52
RAT1YOR048C GPI13Q07830 1017 aa5.56□□□□□ -1.52
RAT1YOR048C ABP140Q08641 628 aaKnown RBP5.56□□□□□ -1.52
RAT1YOR048C YPR202WQ08993 238 aa5.56□□□□□ -1.52
RAT1YOR048C YDR018CQ12185 396 aa5.56□□□□□ -1.52
RAT1YOR048C CBP1P07252 654 aa5.55□□□□□ -1.52
RAT1YOR048C YAK1P14680 807 aa5.55□□□□□ -1.52
RAT1YOR048C MSS116P15424 664 aaKnown RBP5.55□□□□□ -1.52
RAT1YOR048C MRPS28P21771 286 aa5.55□□□□□ -1.52
RAT1YOR048C YSC83P32792 385 aa5.55□□□□□ -1.52
RAT1YOR048C HES1P35843 434 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 75.9 ms