RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	PIG1	Q06216	648 aa		10.15	□□□□□ -0.78
MSB4	YOL112W	LEA1	Q08963	238 aa	Predicted RBP	10.15	□□□□□ -0.78
MSB4	YOL112W	YMR084W	A2P2R3	262 aa		10.14	□□□□□ -0.79
MSB4	YOL112W	KDX1	P36005	433 aa		10.14	□□□□□ -0.79
MSB4	YOL112W	JNM1	P36224	373 aa		10.14	□□□□□ -0.79
MSB4	YOL112W	SHE3	P38272	425 aa	Known RBP	10.14	□□□□□ -0.79
MSB4	YOL112W	PRM6	Q04705	352 aa		10.14	□□□□□ -0.79
MSB4	YOL112W	GPM2	Q12008	311 aa		10.14	□□□□□ -0.79
MSB4	YOL112W	CCH1	P50077	2039 aa		10.13	□□□□□ -0.79
MSB4	YOL112W	SPE1	P08432	466 aa		10.13	□□□□□ -0.79
MSB4	YOL112W	KGD2	P19262	463 aa	Predicted RBP	10.13	□□□□□ -0.79
MSB4	YOL112W	RRP43	P25359	394 aa	Predicted RBP	10.13	□□□□□ -0.79
MSB4	YOL112W	TKL2	P33315	681 aa		10.13	□□□□□ -0.79
MSB4	YOL112W	CBR1	P38626	284 aa	Known RBP	10.13	□□□□□ -0.79
MSB4	YOL112W	YEL075C	P39972	122 aa		10.13	□□□□□ -0.79
MSB4	YOL112W	SHQ1	P40486	507 aa	Predicted RBP	10.13	□□□□□ -0.79
MSB4	YOL112W	ERG5	P54781	538 aa		10.13	□□□□□ -0.79
MSB4	YOL112W	GPD1	Q00055	391 aa	Known RBP	10.13	□□□□□ -0.79
MSB4	YOL112W	TRE1	Q08919	783 aa		10.13	□□□□□ -0.79
MSB4	YOL112W	YER152C	P10356	443 aa		10.12	□□□□□ -0.79
MSB4	YOL112W	NOP4	P37838	685 aa	Known RBP	10.12	□□□□□ -0.79
MSB4	YOL112W	SMC2	P38989	1170 aa	Known RBP	10.12	□□□□□ -0.79
MSB4	YOL112W	TGL3	P40308	642 aa		10.12	□□□□□ -0.79
MSB4	YOL112W	YAP5	P40574	245 aa		10.12	□□□□□ -0.79
MSB4	YOL112W	HXT8	P40886	569 aa		10.12	□□□□□ -0.79
MSB4	YOL112W	OYE3	P41816	400 aa	Predicted RBP	10.12	□□□□□ -0.79
MSB4	YOL112W	TAF1	P46677	1066 aa		10.12	□□□□□ -0.79
MSB4	YOL112W	MND1	P53102	219 aa		10.12	□□□□□ -0.79
MSB4	YOL112W	PUS2	P53167	370 aa		10.12	□□□□□ -0.79
MSB4	YOL112W	SLG1	P54867	378 aa		10.12	□□□□□ -0.79
MSB4	YOL112W	TSR1	Q07381	788 aa	Known RBP	10.12	□□□□□ -0.79
MSB4	YOL112W	NEW1	Q08972	1196 aa	Known RBP	10.12	□□□□□ -0.79
MSB4	YOL112W	RPS3	P05750	240 aa	Known RBP	10.11	□□□□□ -0.79
MSB4	YOL112W	SNF1	P06782	633 aa	Known RBP	10.11	□□□□□ -0.79
MSB4	YOL112W	PDE1	P22434	369 aa		10.11	□□□□□ -0.79
MSB4	YOL112W	GYP6	P32806	458 aa		10.11	□□□□□ -0.79
MSB4	YOL112W	TAF10	Q12030	206 aa		10.11	□□□□□ -0.79
MSB4	YOL112W	VPS54	Q12071	889 aa		10.11	□□□□□ -0.79
MSB4	YOL112W	LRE1	P25579	583 aa	Known RBP	10.1	□□□□□ -0.79
MSB4	YOL112W	RRN6	P32786	894 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	YMC2	P38087	329 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	PCH2	P38126	564 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	SAF1	P38352	637 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	RPT2	P40327	437 aa	Known RBP	10.1	□□□□□ -0.79
MSB4	YOL112W	HER2	Q03557	464 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	SAM3	Q08986	587 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	MTF2	P10849	440 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	YKL050C	P35736	922 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	YBL036C	P38197	257 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	YTA12	P40341	825 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	YJL045W	P47052	634 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	ARO80	Q04052	950 aa		10.1	□□□□□ -0.79
MSB4	YOL112W	BI2	P03873	423 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	BI4	P03879	638 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	VMA4	P22203	233 aa	Known RBP	10.09	□□□□□ -0.79
MSB4	YOL112W	COQ8	P27697	501 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	MRP4	P32902	394 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	ABZ1	P37254	787 aa	Predicted RBP	10.09	□□□□□ -0.79
MSB4	YOL112W	QNS1	P38795	714 aa	Known RBP	10.09	□□□□□ -0.79
MSB4	YOL112W	PEX28	P38848	579 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	YMR124W	P39523	943 aa	Known RBP	10.09	□□□□□ -0.79
MSB4	YOL112W	YDR222W	Q04925	415 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	RCL1	Q08096	367 aa	Predicted RBP	10.09	□□□□□ -0.79
MSB4	YOL112W	DIS3	Q08162	1001 aa	Known RBP	10.09	□□□□□ -0.79
MSB4	YOL112W	SGO1	Q08490	590 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	DDC1	Q08949	612 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	DAP1	Q12091	152 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	BI3	Q9ZZW7	517 aa		10.09	□□□□□ -0.79
MSB4	YOL112W	JIP3	O13555	125 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	APE1	P14904	514 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	MET4	P32389	672 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	RGD1	P38339	666 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	SET5	P38890	526 aa	Known RBP	10.08	□□□□□ -0.8
MSB4	YOL112W	RAD55	P38953	406 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	OSW7	P43611	510 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	PFD1	P46988	109 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	VPS38	Q05919	439 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	FMP25	Q08023	583 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	MDM38	Q08179	573 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	NBP2	Q12163	236 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	EMP46	Q12396	444 aa		10.08	□□□□□ -0.8
MSB4	YOL112W	MOB1	P40484	314 aa		10.07	□□□□□ -0.8
MSB4	YOL112W	VPS25	P47142	202 aa		10.07	□□□□□ -0.8
MSB4	YOL112W	UTP5	Q04177	643 aa	Known RBP	10.07	□□□□□ -0.8
MSB4	YOL112W	OPY2	Q06810	360 aa		10.07	□□□□□ -0.8
MSB4	YOL112W	SIL1	Q08199	421 aa		10.07	□□□□□ -0.8
MSB4	YOL112W	YOR059C	Q08448	450 aa	Known RBP	10.07	□□□□□ -0.8
MSB4	YOL112W	CYC8	P14922	966 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	KAR3	P17119	729 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	YKR051W	P36142	418 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	RDH54	P38086	958 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	RIM4	P38741	713 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	FHL1	P39521	936 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	CDC1	P40986	491 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	GUF1	P46943	645 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	10.06	□□□□□ -0.8	not detected
MSB4	YOL112W	HOP2	P53187	214 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	YGR111W	P53265	400 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	GYL1	Q04322	720 aa		10.06	□□□□□ -0.8
MSB4	YOL112W	YCG1	Q06680	1035 aa		10.06	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms