RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W YJR054WP47114 497 aa11.39□□□□□ -0.59
PRE6YOL038W YNR061CP53747 219 aa11.39□□□□□ -0.59
PRE6YOL038W MZM1Q03429 123 aaPredicted RBP11.39□□□□□ -0.59
PRE6YOL038W EBS1Q03466 884 aaKnown RBP11.39□□□□□ -0.59
PRE6YOL038W GIR2Q03768 265 aaPredicted RBP11.39□□□□□ -0.59
PRE6YOL038W NSE1Q07913 336 aa11.39□□□□□ -0.59
PRE6YOL038W AI5_BETAQ9ZZX0 354 aa11.39□□□□□ -0.59
PRE6YOL038W MRM1P25270 412 aa11.38□□□□□ -0.59
PRE6YOL038W BCH2P36122 765 aa11.38□□□□□ -0.59
PRE6YOL038W SBE2P42223 864 aaKnown RBP11.38□□□□□ -0.59
PRE6YOL038W IES1P43579 692 aa11.38□□□□□ -0.59
PRE6YOL038W ECM22Q05958 814 aaPredicted RBP11.38□□□□□ -0.59
PRE6YOL038W COG4Q06096 861 aa11.38□□□□□ -0.59
PRE6YOL038W HCM1P25364 564 aa11.37□□□□□ -0.59
PRE6YOL038W GSY2P27472 705 aa11.37□□□□□ -0.59
PRE6YOL038W ECM32P32644 1121 aaKnown RBP11.37□□□□□ -0.59
PRE6YOL038W KDX1P36005 433 aa11.37□□□□□ -0.59
PRE6YOL038W FAA4P47912 694 aaKnown RBP11.37□□□□□ -0.59
PRE6YOL038W STE20Q03497 939 aaKnown RBP11.37□□□□□ -0.59
PRE6YOL038W MEX67Q99257 599 aaKnown RBP11.37□□□□□ -0.59
PRE6YOL038W MTF1P14908 341 aaKnown RBP11.36□□□□□ -0.59
PRE6YOL038W DAL2P25335 343 aa11.36□□□□□ -0.59
PRE6YOL038W MRC1P25588 1096 aa11.36□□□□□ -0.59
PRE6YOL038W TSA1P34760 196 aaKnown RBP11.36□□□□□ -0.59
PRE6YOL038W PSY4P38193 441 aa11.36□□□□□ -0.59
PRE6YOL038W LEO1P38439 464 aa11.36□□□□□ -0.59
PRE6YOL038W NPR3P38742 1146 aa11.36□□□□□ -0.59
PRE6YOL038W AVT2P39981 480 aa11.36□□□□□ -0.59
PRE6YOL038W BTT1P40314 149 aaPredicted RBP11.36□□□□□ -0.59
PRE6YOL038W LSB3P43603 459 aaKnown RBP11.36□□□□□ -0.59
PRE6YOL038W ATH1P48016 1211 aa11.36□□□□□ -0.59
PRE6YOL038W YLR297WQ05899 129 aa11.36□□□□□ -0.59
PRE6YOL038W PDC6P26263 563 aaKnown RBP11.35□□□□□ -0.59
PRE6YOL038W DAL1P32375 460 aa11.35□□□□□ -0.59
PRE6YOL038W DSS4P32601 143 aa11.35□□□□□ -0.59
PRE6YOL038W SWE1P32944 819 aa11.35□□□□□ -0.59
PRE6YOL038W YBR225WP38321 900 aa11.35□□□□□ -0.59
PRE6YOL038W RAD55P38953 406 aa11.35□□□□□ -0.59
PRE6YOL038W DJP1P40564 432 aa11.35□□□□□ -0.59
PRE6YOL038W TUB4P53378 473 aa11.35□□□□□ -0.59
PRE6YOL038W CSR1Q06705 408 aaKnown RBP11.35□□□□□ -0.59
PRE6YOL038W YET1P35723 206 aa11.34□□□□□ -0.59
PRE6YOL038W NUP60P39705 539 aa11.34□□□□□ -0.59
PRE6YOL038W CDC1P40986 491 aa11.34□□□□□ -0.59
PRE6YOL038W RMD8P43620 662 aa11.34□□□□□ -0.59
PRE6YOL038W GUF1P46943 645 aa11.34□□□□□ -0.59
PRE6YOL038W KRE33P53914 1056 aaKnown RBP11.34□□□□□ -0.59
PRE6YOL038W HAP5Q02516 242 aa11.34□□□□□ -0.59
PRE6YOL038W SPO75Q07798 868 aa11.34□□□□□ -0.59
PRE6YOL038W RCL1Q08096 367 aaPredicted RBP11.34□□□□□ -0.59
PRE6YOL038W DDC1Q08949 612 aa11.34□□□□□ -0.59
PRE6YOL038W CSG2P35206 410 aa11.33□□□□□ -0.6
PRE6YOL038W CTM1P38818 585 aa11.33□□□□□ -0.6
PRE6YOL038W RVS167P39743 482 aaKnown RBP11.33□□□□□ -0.6
PRE6YOL038W CHS6P40955 746 aa11.33□□□□□ -0.6
PRE6YOL038W YGL036WP53185 909 aaPredicted RBP11.33□□□□□ -0.6
PRE6YOL038W TMA16Q08687 178 aa11.33□□□□□ -0.6
PRE6YOL038W YOR387CQ08910 206 aa11.33□□□□□ -0.6
PRE6YOL038W TRE1Q08919 783 aa11.33□□□□□ -0.6
PRE6YOL038W VPS54Q12071 889 aa11.33□□□□□ -0.6
PRE6YOL038W NBP2Q12163 236 aa11.33□□□□□ -0.6
PRE6YOL038W LCB4Q12246 624 aa11.33□□□□□ -0.6
PRE6YOL038W TRP2P00899 507 aaKnown RBP11.32□□□□□ -0.6
PRE6YOL038W CDC37P06101 506 aaKnown RBP11.32□□□□□ -0.6
PRE6YOL038W LRE1P25579 583 aaKnown RBP11.32□□□□□ -0.6
PRE6YOL038W APL1P27351 700 aa11.32□□□□□ -0.6
PRE6YOL038W MAP2P38174 421 aaKnown RBP11.32□□□□□ -0.6
PRE6YOL038W VPS70P47161 811 aa11.32□□□□□ -0.6
PRE6YOL038W CWC24P53769 259 aa11.32□□□□□ -0.6
PRE6YOL038W YPL062WQ02781 134 aa11.32□□□□□ -0.6
PRE6YOL038W CWC2Q12046 339 aaPredicted RBP11.32□□□□□ -0.6
PRE6YOL038W AIM44Q99299 758 aa11.32□□□□□ -0.6
PRE6YOL038W MSB2P32334 1306 aa11.32□□□□□ -0.6
PRE6YOL038W ABZ1P37254 787 aaPredicted RBP11.31□□□□□ -0.6
PRE6YOL038W ADE17P38009 592 aaKnown RBP11.31□□□□□ -0.6
PRE6YOL038W EFM2P38347 419 aa11.31□□□□□ -0.6
PRE6YOL038W YIL161WP40449 235 aaKnown RBP11.31□□□□□ -0.6
PRE6YOL038W DRN1P53255 507 aaKnown RBP11.31□□□□□ -0.6
PRE6YOL038W HRD3Q05787 833 aa11.31□□□□□ -0.6
PRE6YOL038W FUS1P11710 512 aa11.3□□□□□ -0.6
PRE6YOL038W STE5P32917 917 aa11.3□□□□□ -0.6
PRE6YOL038W VPS24P36095 224 aaKnown RBP11.3□□□□□ -0.6
PRE6YOL038W SHM1P37292 490 aaPredicted RBP11.3□□□□□ -0.6
PRE6YOL038W NEM1P38757 446 aa11.3□□□□□ -0.6
PRE6YOL038W DYS1P38791 387 aa11.3□□□□□ -0.6
PRE6YOL038W MTD1Q02046 320 aaKnown RBP11.3□□□□□ -0.6
PRE6YOL038W DIS3Q08162 1001 aaKnown RBP11.3□□□□□ -0.6
PRE6YOL038W LPX1Q12405 387 aaKnown RBP11.3□□□□□ -0.6
PRE6YOL038W REV1P12689 985 aa11.29□□□□□ -0.6
PRE6YOL038W TIF5P38431 405 aaKnown RBP11.29□□□□□ -0.6
PRE6YOL038W YEL075CP39972 122 aa11.29□□□□□ -0.6
PRE6YOL038W DOT6P40059 670 aaKnown RBP11.29□□□□□ -0.6
PRE6YOL038W RPT2P40327 437 aaKnown RBP11.29□□□□□ -0.6
PRE6YOL038W SHQ1P40486 507 aaPredicted RBP11.29□□□□□ -0.6
PRE6YOL038W GYP8P43570 497 aa11.29□□□□□ -0.6
PRE6YOL038W PFD1P46988 109 aa11.29□□□□□ -0.6
PRE6YOL038W COS5P47187 383 aa11.29□□□□□ -0.6
PRE6YOL038W MND1P53102 219 aa11.29□□□□□ -0.6
PRE6YOL038W GFD1Q04839 188 aaKnown RBP11.29□□□□□ -0.6
PRE6YOL038W MSH2P25847 964 aa11.28□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms