RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W GYP5Q12344 894 aa3.18□□□□□ -1.9
SIN3YOL004W YPR071WQ12346 211 aa3.18□□□□□ -1.9
SIN3YOL004W RIM15P43565 1770 aa3.18□□□□□ -1.9
SIN3YOL004W RAD18P10862 487 aa3.18□□□□□ -1.9
SIN3YOL004W VPS24P36095 224 aaKnown RBP3.18□□□□□ -1.9
SIN3YOL004W ELO1P39540 310 aa3.18□□□□□ -1.9
SIN3YOL004W VNX1P42839 908 aa3.18□□□□□ -1.9
SIN3YOL004W UFD2P54860 961 aa3.18□□□□□ -1.9
SIN3YOL004W YSA1Q01976 231 aa3.18□□□□□ -1.9
SIN3YOL004W YDR444WQ04093 687 aa3.18□□□□□ -1.9
SIN3YOL004W SGO1Q08490 590 aa3.18□□□□□ -1.9
SIN3YOL004W SSF2Q12153 453 aaPredicted RBP3.18□□□□□ -1.9
SIN3YOL004W YDR034W-BQ6Q5X2 51 aa3.18□□□□□ -1.9
SIN3YOL004W INH1P01097 85 aa3.18□□□□□ -1.9
SIN3YOL004W YIM1P28625 365 aa3.18□□□□□ -1.9
SIN3YOL004W TOA1P32773 286 aa3.18□□□□□ -1.9
SIN3YOL004W RPT1P33299 467 aaKnown RBP3.18□□□□□ -1.9
SIN3YOL004W GLY1P37303 387 aaKnown RBP3.18□□□□□ -1.9
SIN3YOL004W YHL008CP38750 627 aa3.18□□□□□ -1.9
SIN3YOL004W SPO20Q04359 397 aa3.18□□□□□ -1.9
SIN3YOL004W EST2Q06163 884 aa3.18□□□□□ -1.9
SIN3YOL004W DIS3Q08162 1001 aaKnown RBP3.18□□□□□ -1.9
SIN3YOL004W YIL177CP40434 1758 aa3.17□□□□□ -1.9
SIN3YOL004W YJL225CP40889 1758 aa3.17□□□□□ -1.9
SIN3YOL004W HXK1P04806 485 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W MRS6P32864 603 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W ASG7P46993 209 aa3.17□□□□□ -1.9
SIN3YOL004W SEC18P18759 758 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W GID7P25569 745 aa3.17□□□□□ -1.9
SIN3YOL004W CWH43P25618 953 aa3.17□□□□□ -1.9
SIN3YOL004W CRM1P30822 1084 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W MCR1P36060 302 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W SLX1P38324 304 aa3.17□□□□□ -1.9
SIN3YOL004W GPI16P38875 610 aa3.17□□□□□ -1.9
SIN3YOL004W YEL023CP39992 682 aa3.17□□□□□ -1.9
SIN3YOL004W MVP1P40959 511 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W BDP1P46678 594 aa3.17□□□□□ -1.9
SIN3YOL004W HLJ1P48353 224 aa3.17□□□□□ -1.9
SIN3YOL004W RAD2P07276 1031 aa3.17□□□□□ -1.9
SIN3YOL004W SPE1P08432 466 aa3.17□□□□□ -1.9
SIN3YOL004W MTF2P10849 440 aa3.17□□□□□ -1.9
SIN3YOL004W TRX2P22803 104 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W PRP22P24384 1145 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W CLB2P24869 491 aa3.17□□□□□ -1.9
SIN3YOL004W TSA1P34760 196 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W TVP38P36164 337 aa3.17□□□□□ -1.9
SIN3YOL004W YNL092WP53934 400 aa3.17□□□□□ -1.9
SIN3YOL004W EGD1Q02642 157 aaKnown RBP3.17□□□□□ -1.9
SIN3YOL004W ERP3Q12403 225 aa3.17□□□□□ -1.9
SIN3YOL004W VCX1Q99385 411 aa3.17□□□□□ -1.9
SIN3YOL004W ADY2P25613 283 aa3.16□□□□□ -1.9
SIN3YOL004W CMK1P27466 446 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W MTC2P34246 357 aa3.16□□□□□ -1.9
SIN3YOL004W OSH3P38713 996 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W MSR1P38714 643 aa3.16□□□□□ -1.9
SIN3YOL004W ATG16Q03818 150 aa3.16□□□□□ -1.9
SIN3YOL004W WHI5Q12416 295 aa3.16□□□□□ -1.9
SIN3YOL004W TRL1P09880 827 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W PRE8P23639 250 aa3.16□□□□□ -1.9
SIN3YOL004W MCM2P29469 868 aa3.16□□□□□ -1.9
SIN3YOL004W EBP2P36049 427 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W YBR287WP38355 427 aa3.16□□□□□ -1.9
SIN3YOL004W YJR142WP47173 342 aa3.16□□□□□ -1.9
SIN3YOL004W SPH1Q06160 661 aa3.16□□□□□ -1.9
SIN3YOL004W HMI1Q12039 706 aa3.16□□□□□ -1.9
SIN3YOL004W PKH2Q12236 1081 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W PRT1P06103 763 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W RPL4AP10664 362 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W RDS2P19541 446 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W CHL1P22516 861 aaPredicted RBP3.16□□□□□ -1.9
SIN3YOL004W GFD2P25370 566 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W MET4P32389 672 aa3.16□□□□□ -1.9
SIN3YOL004W YTA12P40341 825 aa3.16□□□□□ -1.9
SIN3YOL004W RPL4BP49626 362 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W YLR040CQ07988 224 aa3.16□□□□□ -1.9
SIN3YOL004W SPS1P08458 490 aa3.16□□□□□ -1.9
SIN3YOL004W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
SIN3YOL004W SIS1P25294 352 aaKnown RBP3.16□□□□□ -1.9
SIN3YOL004W STN1P38960 494 aa3.16□□□□□ -1.9
SIN3YOL004W YIR016WP40572 265 aa3.16□□□□□ -1.9
SIN3YOL004W YGR122WP53272 402 aa3.16□□□□□ -1.9
SIN3YOL004W TRS120Q04183 1289 aa3.16□□□□□ -1.9
SIN3YOL004W RSM22P36056 628 aa3.15□□□□□ -1.9
SIN3YOL004W UTP7P40055 554 aaKnown RBP3.15□□□□□ -1.9
SIN3YOL004W TGL3P40308 642 aa3.15□□□□□ -1.9
SIN3YOL004W SMA1Q02651 245 aa3.15□□□□□ -1.9
SIN3YOL004W PSR2Q07949 397 aa3.15□□□□□ -1.9
SIN3YOL004W TSC13Q99190 310 aa3.15□□□□□ -1.9
SIN3YOL004W PXA2P34230 853 aa3.15□□□□□ -1.91
SIN3YOL004W PTK1P36002 662 aaPredicted RBP3.15□□□□□ -1.91
SIN3YOL004W MRPS18P42847 217 aa3.15□□□□□ -1.91
SIN3YOL004W UBX6P47049 396 aa3.15□□□□□ -1.91
SIN3YOL004W TIF35Q04067 274 aaKnown RBP3.15□□□□□ -1.91
SIN3YOL004W TRM1P15565 570 aaKnown RBP3.15□□□□□ -1.91
SIN3YOL004W RPL8AP17076 256 aaKnown RBP3.15□□□□□ -1.91
SIN3YOL004W MPE1P35728 441 aaKnown RBP3.15□□□□□ -1.91
SIN3YOL004W HMT1P38074 348 aa3.15□□□□□ -1.91
SIN3YOL004W ECM2P38241 364 aaKnown RBP3.15□□□□□ -1.91
SIN3YOL004W SOH1P38633 127 aa3.15□□□□□ -1.91
SIN3YOL004W GIP4P39732 760 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 93.4 ms