RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W DLT1Q04216 342 aa1.54□□□□□ -2.16
SEC21YNL287W SLX4Q12098 748 aa1.54□□□□□ -2.16
SEC21YNL287W TUF1P02992 437 aaKnown RBP1.54□□□□□ -2.16
SEC21YNL287W TOM70P07213 617 aaKnown RBP1.54□□□□□ -2.16
SEC21YNL287W MET3P08536 511 aa1.54□□□□□ -2.16
SEC21YNL287W STI1P15705 589 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
SEC21YNL287W VPH1P32563 840 aaKnown RBP1.54□□□□□ -2.16
SEC21YNL287W IME2P32581 645 aa1.54□□□□□ -2.16
SEC21YNL287W MTC2P34246 357 aa1.54□□□□□ -2.16
SEC21YNL287W APL2P36000 726 aaPredicted RBP1.54□□□□□ -2.16
SEC21YNL287W ARB1P40024 610 aaKnown RBP1.54□□□□□ -2.16
SEC21YNL287W PFD1P46988 109 aa1.54□□□□□ -2.16
SEC21YNL287W YJL163CP46996 555 aa1.54□□□□□ -2.16
SEC21YNL287W SRB7P47822 140 aa1.54□□□□□ -2.16
SEC21YNL287W VID30P53076 958 aa1.54□□□□□ -2.16
SEC21YNL287W ALD6P54115 500 aaKnown RBP1.54□□□□□ -2.16
SEC21YNL287W VMS1Q04311 632 aaKnown RBP1.54□□□□□ -2.16
SEC21YNL287W YDR286CQ05530 114 aa1.54□□□□□ -2.16
SEC21YNL287W RPN7Q06103 429 aaKnown RBP1.54□□□□□ -2.16
SEC21YNL287W GGA1Q06336 557 aa1.54□□□□□ -2.16
SEC21YNL287W YLH47Q06493 454 aa1.54□□□□□ -2.16
SEC21YNL287W ARV1Q06541 321 aa1.54□□□□□ -2.16
SEC21YNL287W OPI10Q08202 246 aa1.54□□□□□ -2.16
SEC21YNL287W BMS1Q08965 1183 aaKnown RBP1.54□□□□□ -2.16
SEC21YNL287W ATP4P05626 244 aa1.53□□□□□ -2.16
SEC21YNL287W RED1P14291 827 aa1.53□□□□□ -2.16
SEC21YNL287W MRPL25P23369 157 aa1.53□□□□□ -2.16
SEC21YNL287W MEF1P25039 761 aa1.53□□□□□ -2.16
SEC21YNL287W TYE7P33122 291 aaPredicted RBP1.53□□□□□ -2.16
SEC21YNL287W MRP8P35719 219 aa1.53□□□□□ -2.16
SEC21YNL287W NOP4P37838 685 aaKnown RBP1.53□□□□□ -2.16
SEC21YNL287W ERT1P38140 529 aa1.53□□□□□ -2.16
SEC21YNL287W RPP1P38786 293 aa1.53□□□□□ -2.16
SEC21YNL287W NDE1P40215 560 aa1.53□□□□□ -2.16
SEC21YNL287W TOK1P40310 691 aa1.53□□□□□ -2.16
SEC21YNL287W RIC1P40395 1056 aa1.53□□□□□ -2.16
SEC21YNL287W IRR1P40541 1150 aa1.53□□□□□ -2.16
SEC21YNL287W YJL049WP47048 450 aa1.53□□□□□ -2.16
SEC21YNL287W KEL2P50090 882 aa1.53□□□□□ -2.16
SEC21YNL287W MUP1P50276 574 aa1.53□□□□□ -2.16
SEC21YNL287W VPS73P53142 486 aaKnown RBP1.53□□□□□ -2.16
SEC21YNL287W TGL2P54857 326 aa1.53□□□□□ -2.16
SEC21YNL287W RRB1Q04225 511 aaKnown RBP1.53□□□□□ -2.16
SEC21YNL287W UTP14Q04500 899 aaKnown RBP1.53□□□□□ -2.16
SEC21YNL287W YLR352WQ06479 807 aa1.53□□□□□ -2.16
SEC21YNL287W YPR196WQ06595 470 aa1.53□□□□□ -2.16
SEC21YNL287W CLP1Q08685 445 aaPredicted RBP1.53□□□□□ -2.16
SEC21YNL287W PGC1Q08959 321 aa1.53□□□□□ -2.16
SEC21YNL287W RRP36Q12481 300 aaPredicted RBP1.53□□□□□ -2.16
SEC21YNL287W YNL162W-AQ3E7A8 72 aa1.53□□□□□ -2.16
SEC21YNL287W MET6P05694 767 aaKnown RBP1.53□□□□□ -2.16
SEC21YNL287W CAF20P12962 161 aaKnown RBP1.53□□□□□ -2.16
SEC21YNL287W ACP1P32463 125 aa1.53□□□□□ -2.16
SEC21YNL287W CBF5P33322 483 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
SEC21YNL287W PBY1P38254 753 aa1.53□□□□□ -2.16
SEC21YNL287W CRP1P38845 465 aaKnown RBP1.53□□□□□ -2.16
SEC21YNL287W ESL1P40456 1118 aa1.53□□□□□ -2.16
SEC21YNL287W CCM1P48237 864 aaPredicted RBP1.53□□□□□ -2.16
SEC21YNL287W DSL1P53847 754 aa1.53□□□□□ -2.16
SEC21YNL287W RAD33Q04231 177 aa1.53□□□□□ -2.16
SEC21YNL287W DBP9Q06218 594 aaKnown RBP1.53□□□□□ -2.16
SEC21YNL287W PCL8Q08966 492 aa1.53□□□□□ -2.16
SEC21YNL287W FAL1Q12099 399 aaKnown RBP1.53□□□□□ -2.16
SEC21YNL287W YOL087CQ99247 1116 aa1.53□□□□□ -2.16
SEC21YNL287W INH1P01097 85 aa1.53□□□□□ -2.17
SEC21YNL287W TUB1P09733 447 aaKnown RBP1.53□□□□□ -2.17
SEC21YNL287W HNM1P19807 563 aa1.53□□□□□ -2.17
SEC21YNL287W ADY2P25613 283 aa1.53□□□□□ -2.17
SEC21YNL287W DAL80P26343 269 aa1.53□□□□□ -2.17
SEC21YNL287W HIR1P32479 840 aa1.53□□□□□ -2.17
SEC21YNL287W RPC37P36121 282 aa1.53□□□□□ -2.17
SEC21YNL287W YHR078WP38799 552 aa1.53□□□□□ -2.17
SEC21YNL287W YIL108WP40483 696 aaKnown RBP1.53□□□□□ -2.17
SEC21YNL287W AMA1P50082 593 aa1.53□□□□□ -2.17
SEC21YNL287W BTN2P53286 410 aa1.53□□□□□ -2.17
SEC21YNL287W YNR029CP53729 429 aaKnown RBP1.53□□□□□ -2.17
SEC21YNL287W ZDS2P54786 942 aa1.53□□□□□ -2.17
SEC21YNL287W ARO10Q06408 635 aa1.53□□□□□ -2.17
SEC21YNL287W YDR306CQ06640 478 aa1.53□□□□□ -2.17
SEC21YNL287W ISA1Q07821 250 aaPredicted RBP1.53□□□□□ -2.17
SEC21YNL287W CDC53Q12018 815 aaKnown RBP1.53□□□□□ -2.17
SEC21YNL287W TAF3Q12297 353 aa1.53□□□□□ -2.17
SEC21YNL287W SWM1Q12379 170 aa1.53□□□□□ -2.17
SEC21YNL287W CIT1P00890 479 aa1.52□□□□□ -2.17
SEC21YNL287W ADE8P04161 214 aa1.52□□□□□ -2.17
SEC21YNL287W GFA1P14742 717 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W CLN1P20437 546 aa1.52□□□□□ -2.17
SEC21YNL287W CLN2P20438 545 aa1.52□□□□□ -2.17
SEC21YNL287W MSH2P25847 964 aa1.52□□□□□ -2.17
SEC21YNL287W MRE11P32829 692 aa1.52□□□□□ -2.17
SEC21YNL287W LTV1P34078 463 aa1.52□□□□□ -2.17
SEC21YNL287W JNM1P36224 373 aa1.52□□□□□ -2.17
SEC21YNL287W EXO84P38261 753 aa1.52□□□□□ -2.17
SEC21YNL287W UBS1P38290 277 aa1.52□□□□□ -2.17
SEC21YNL287W TDP1P38319 544 aa1.52□□□□□ -2.17
SEC21YNL287W SIC1P38634 284 aa1.52□□□□□ -2.17
SEC21YNL287W BFR1P38934 470 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17 RIP-Chip
SEC21YNL287W CCT3P39077 534 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W YER034WP40022 185 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W NUP82P40368 713 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms