RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A TUB3P09734 445 aaKnown RBP4.62□□□□□ -1.67
YSF3YNL138W-A RAD18P10862 487 aa4.62□□□□□ -1.67
YSF3YNL138W-A SSY5P47002 699 aa4.62□□□□□ -1.67
YSF3YNL138W-A ZDS1P50111 915 aaKnown RBP4.62□□□□□ -1.67
YSF3YNL138W-A TFB2Q02939 513 aa4.62□□□□□ -1.67
YSF3YNL138W-A YDR338CQ05497 695 aa4.62□□□□□ -1.67
YSF3YNL138W-A THI21Q08975 551 aa4.62□□□□□ -1.67
YSF3YNL138W-A PRP4P20053 465 aaKnown RBP4.61□□□□□ -1.67
YSF3YNL138W-A HCM1P25364 564 aa4.61□□□□□ -1.67
YSF3YNL138W-A YCR015CP25616 317 aa4.61□□□□□ -1.67
YSF3YNL138W-A DCG1P32460 244 aa4.61□□□□□ -1.67
YSF3YNL138W-A YKL222CP35995 705 aa4.61□□□□□ -1.67
YSF3YNL138W-A SAK1P38990 1142 aa4.61□□□□□ -1.67
YSF3YNL138W-A CAF16P43569 289 aa4.61□□□□□ -1.67
YSF3YNL138W-A PEX19Q07418 342 aa4.61□□□□□ -1.67
YSF3YNL138W-A SWM1Q12379 170 aa4.61□□□□□ -1.67
YSF3YNL138W-A NOP14Q99207 810 aaKnown RBP4.61□□□□□ -1.67
YSF3YNL138W-A ADE6P38972 1358 aaKnown RBP4.61□□□□□ -1.67
YSF3YNL138W-A YPR117WQ06116 2489 aa4.6□□□□□ -1.67
YSF3YNL138W-A PMA1P05030 918 aaKnown RBP4.6□□□□□ -1.67
YSF3YNL138W-A PFK1P16861 987 aaKnown RBP4.6□□□□□ -1.67
YSF3YNL138W-A PZF1P39933 429 aa4.6□□□□□ -1.67
YSF3YNL138W-A VHR1P40522 640 aa4.6□□□□□ -1.67
YSF3YNL138W-A ZIP2P53061 704 aa4.6□□□□□ -1.67
YSF3YNL138W-A DNM1P54861 757 aa4.6□□□□□ -1.67
YSF3YNL138W-A MUS81Q04149 632 aaPredicted RBP4.6□□□□□ -1.67
YSF3YNL138W-A ASM4Q05166 528 aa4.6□□□□□ -1.67
YSF3YNL138W-A GUP2Q08929 609 aa4.6□□□□□ -1.67
YSF3YNL138W-A MAL31P38156 614 aa4.59□□□□□ -1.67
YSF3YNL138W-A ASI2P53895 289 aa4.59□□□□□ -1.67
YSF3YNL138W-A SNP1Q00916 300 aaPredicted RBP4.59□□□□□ -1.67
YSF3YNL138W-A ENB1Q08299 606 aa4.59□□□□□ -1.67
YSF3YNL138W-A SLM3Q12093 417 aa4.59□□□□□ -1.67
YSF3YNL138W-A Q0142Q9ZZW4 58 aa4.59□□□□□ -1.67
YSF3YNL138W-A RAV1P47104 1357 aa4.58□□□□□ -1.68
YSF3YNL138W-A RPL8AP17076 256 aaKnown RBP4.58□□□□□ -1.68
YSF3YNL138W-A MIH1P23748 554 aa4.58□□□□□ -1.68
YSF3YNL138W-A PCL2P25693 308 aa4.58□□□□□ -1.68
YSF3YNL138W-A HOG1P32485 435 aa4.58□□□□□ -1.68
YSF3YNL138W-A RPN10P38886 268 aaKnown RBP4.58□□□□□ -1.68
YSF3YNL138W-A PFA3P42836 336 aa4.58□□□□□ -1.68
YSF3YNL138W-A AIM14P53109 570 aa4.58□□□□□ -1.68
YSF3YNL138W-A YLR001CQ07895 862 aa4.58□□□□□ -1.68
YSF3YNL138W-A NTO1Q12311 748 aa4.58□□□□□ -1.68
YSF3YNL138W-A ADR1P07248 1323 aa4.57□□□□□ -1.68
YSF3YNL138W-A NPY1P53164 384 aa4.57□□□□□ -1.68
YSF3YNL138W-A MRPS35P53292 345 aa4.57□□□□□ -1.68
YSF3YNL138W-A YNL193WP53870 558 aa4.57□□□□□ -1.68
YSF3YNL138W-A ERG5P54781 538 aa4.57□□□□□ -1.68
YSF3YNL138W-A BUG1Q12191 341 aa4.57□□□□□ -1.68
YSF3YNL138W-A GPR1Q12361 961 aa4.57□□□□□ -1.68
YSF3YNL138W-A YLR149CQ99296 730 aa4.57□□□□□ -1.68
YSF3YNL138W-A AIM44Q99299 758 aa4.57□□□□□ -1.68
YSF3YNL138W-A FAS2P19097 1887 aaKnown RBP4.56□□□□□ -1.68
YSF3YNL138W-A SFL1P20134 766 aa4.56□□□□□ -1.68
YSF3YNL138W-A SFP1P32432 683 aa4.56□□□□□ -1.68
YSF3YNL138W-A CTF13P35203 478 aa4.56□□□□□ -1.68
YSF3YNL138W-A SPC42P36094 363 aa4.56□□□□□ -1.68
YSF3YNL138W-A YKR051WP36142 418 aa4.56□□□□□ -1.68
YSF3YNL138W-A BRN1P38170 754 aa4.56□□□□□ -1.68
YSF3YNL138W-A RPP1P38786 293 aa4.56□□□□□ -1.68
YSF3YNL138W-A YFL052WP43551 465 aa4.56□□□□□ -1.68
YSF3YNL138W-A YJR142WP47173 342 aa4.56□□□□□ -1.68
YSF3YNL138W-A MTR3P48240 250 aaPredicted RBP4.56□□□□□ -1.68
YSF3YNL138W-A BUL1P48524 976 aa4.56□□□□□ -1.68
YSF3YNL138W-A UBC9P50623 157 aaPredicted RBP4.56□□□□□ -1.68
YSF3YNL138W-A MET13P53128 600 aa4.56□□□□□ -1.68
YSF3YNL138W-A PKH1Q03407 766 aa4.56□□□□□ -1.68
YSF3YNL138W-A NHX1Q04121 633 aa4.56□□□□□ -1.68
YSF3YNL138W-A TRM11Q12463 433 aa4.56□□□□□ -1.68
YSF3YNL138W-A HMG1P12683 1054 aa4.55□□□□□ -1.68
YSF3YNL138W-A ENP1P38333 483 aaKnown RBP4.55□□□□□ -1.68
YSF3YNL138W-A ATG33Q06485 197 aa4.55□□□□□ -1.68
YSF3YNL138W-A RIX7Q07844 837 aaKnown RBP4.55□□□□□ -1.68
YSF3YNL138W-A NUM1Q00402 2748 aa4.55□□□□□ -1.68
YSF3YNL138W-A YLR419WQ06698 1435 aaKnown RBP4.55□□□□□ -1.68
YSF3YNL138W-A YLR415CO13578 112 aa4.54□□□□□ -1.68
YSF3YNL138W-A TRP4P07285 380 aaPredicted RBP4.54□□□□□ -1.68
YSF3YNL138W-A HRR25P29295 494 aaKnown RBP4.54□□□□□ -1.68
YSF3YNL138W-A TRM2P33753 639 aa4.54□□□□□ -1.68
YSF3YNL138W-A DEF1P35732 738 aaKnown RBP4.54□□□□□ -1.68
YSF3YNL138W-A HSL7P38274 827 aa4.54□□□□□ -1.68
YSF3YNL138W-A PCM1P38628 557 aaKnown RBP4.54□□□□□ -1.68
YSF3YNL138W-A FKH2P41813 862 aa4.54□□□□□ -1.68
YSF3YNL138W-A BNA2P47125 453 aa4.54□□□□□ -1.68
YSF3YNL138W-A YVH1Q02256 364 aaKnown RBP4.54□□□□□ -1.68
YSF3YNL138W-A UTP14Q04500 899 aaKnown RBP4.54□□□□□ -1.68
YSF3YNL138W-A AIM39Q08223 395 aa4.54□□□□□ -1.68
YSF3YNL138W-A TRM13Q12383 476 aa4.54□□□□□ -1.68
YSF3YNL138W-A EFT1P32324 842 aaKnown RBP4.53□□□□□ -1.68
YSF3YNL138W-A NGG1P32494 702 aa4.53□□□□□ -1.68
YSF3YNL138W-A YEL1P34225 687 aa4.53□□□□□ -1.68
YSF3YNL138W-A FPR3P38911 411 aaKnown RBP4.53□□□□□ -1.68
YSF3YNL138W-A DOT6P40059 670 aaKnown RBP4.53□□□□□ -1.68
YSF3YNL138W-A HLJ1P48353 224 aa4.53□□□□□ -1.68
YSF3YNL138W-A SDA1P53313 767 aaKnown RBP4.53□□□□□ -1.68
YSF3YNL138W-A SUN4P53616 420 aa4.53□□□□□ -1.68
YSF3YNL138W-A RPN7Q06103 429 aaKnown RBP4.53□□□□□ -1.68
YSF3YNL138W-A NYV1Q12255 253 aa4.53□□□□□ -1.68
YSF3YNL138W-A GIN4Q12263 1142 aa4.53□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms