RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W SAP185P40856 1058 aa4.04□□□□□ -1.76
ECM16YMR128W MDM1Q01846 1127 aa4.04□□□□□ -1.76
ECM16YMR128W BDS1Q08347 646 aa4.04□□□□□ -1.76
ECM16YMR128W CLF1Q12309 687 aaPredicted RBP4.04□□□□□ -1.76
ECM16YMR128W POL3P15436 1097 aa4.04□□□□□ -1.76
ECM16YMR128W STE13P33894 931 aa4.04□□□□□ -1.76
ECM16YMR128W YBR032WP38223 100 aa4.04□□□□□ -1.76
ECM16YMR128W SMC2P38989 1170 aaKnown RBP4.04□□□□□ -1.76
ECM16YMR128W TFG1P41895 735 aaPredicted RBP4.04□□□□□ -1.76
ECM16YMR128W SPR3P41901 512 aa4.04□□□□□ -1.76
ECM16YMR128W ILM1P47155 203 aa4.04□□□□□ -1.76
ECM16YMR128W RNH70P53331 553 aa4.04□□□□□ -1.76
ECM16YMR128W CPR6P53691 371 aaKnown RBP4.04□□□□□ -1.76
ECM16YMR128W TOF1P53840 1238 aa4.04□□□□□ -1.76
ECM16YMR128W OPY2Q06810 360 aa4.04□□□□□ -1.76
ECM16YMR128W RIX7Q07844 837 aaKnown RBP4.04□□□□□ -1.76
ECM16YMR128W ARD1P07347 238 aaPredicted RBP4.03□□□□□ -1.76
ECM16YMR128W RPB2P08518 1224 aaKnown RBP4.03□□□□□ -1.76
ECM16YMR128W YKL050CP35736 922 aa4.03□□□□□ -1.76
ECM16YMR128W PXA1P41909 870 aa4.03□□□□□ -1.76
ECM16YMR128W BRE2P43132 505 aa4.03□□□□□ -1.76
ECM16YMR128W ERP6P53198 216 aa4.03□□□□□ -1.76
ECM16YMR128W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
ECM16YMR128W VPS30Q02948 557 aa4.03□□□□□ -1.76
ECM16YMR128W YMR187CQ03236 431 aa4.03□□□□□ -1.76
ECM16YMR128W BSC2Q05611 235 aa4.03□□□□□ -1.76
ECM16YMR128W RGA2Q06407 1009 aa4.03□□□□□ -1.76
ECM16YMR128W IMH1Q06704 911 aaKnown RBP4.03□□□□□ -1.76
ECM16YMR128W TUS1Q06412 1307 aa4.03□□□□□ -1.76
ECM16YMR128W SCD5P34758 872 aa4.03□□□□□ -1.76
ECM16YMR128W RCK2P38623 610 aa4.03□□□□□ -1.76
ECM16YMR128W YFH7P43591 353 aa4.03□□□□□ -1.76
ECM16YMR128W ALG2P43636 503 aa4.03□□□□□ -1.76
ECM16YMR128W NAM8Q00539 523 aaKnown RBP4.03□□□□□ -1.76
ECM16YMR128W TCO89Q08921 799 aa4.03□□□□□ -1.76
ECM16YMR128W GCD2P12754 651 aaPredicted RBP4.03□□□□□ -1.76
ECM16YMR128W KRE2P27809 442 aa4.03□□□□□ -1.76
ECM16YMR128W VRP1P37370 817 aa4.03□□□□□ -1.76
ECM16YMR128W ECM2P38241 364 aaKnown RBP4.03□□□□□ -1.76
ECM16YMR128W NUT1P53114 1132 aa4.03□□□□□ -1.76
ECM16YMR128W NOG1Q02892 647 aaKnown RBP4.03□□□□□ -1.76
ECM16YMR128W YPR078CQ06813 372 aa4.03□□□□□ -1.76
ECM16YMR128W YPL260WQ08977 551 aa4.03□□□□□ -1.76
ECM16YMR128W BMT6Q12291 365 aa4.03□□□□□ -1.76
ECM16YMR128W YLR462WO13556 202 aa4.02□□□□□ -1.77
ECM16YMR128W BUD14P27637 709 aa4.02□□□□□ -1.77
ECM16YMR128W RAD5P32849 1169 aaPredicted RBP4.02□□□□□ -1.77
ECM16YMR128W MKS1P34072 584 aa4.02□□□□□ -1.77
ECM16YMR128W YHL049CP38722 271 aa4.02□□□□□ -1.77
ECM16YMR128W OAF1P39720 1047 aaPredicted RBP4.02□□□□□ -1.77
ECM16YMR128W TIF4631P39935 952 aaKnown RBP4.02□□□□□ -1.77
ECM16YMR128W YEL075CP39972 122 aa4.02□□□□□ -1.77
ECM16YMR128W YER189WP40104 122 aa4.02□□□□□ -1.77
ECM16YMR128W GSM1P42950 618 aa4.02□□□□□ -1.77
ECM16YMR128W YFL064CP43540 174 aa4.02□□□□□ -1.77
ECM16YMR128W RSM26P47141 266 aa4.02□□□□□ -1.77
ECM16YMR128W ULP1Q02724 621 aa4.02□□□□□ -1.77
ECM16YMR128W NKP1Q12493 238 aa4.02□□□□□ -1.77
ECM16YMR128W YBL111CQ3E7Y5 667 aa4.02□□□□□ -1.77
ECM16YMR128W CAP1P28495 268 aaKnown RBP4.02□□□□□ -1.77
ECM16YMR128W EFB1P32471 206 aaKnown RBP4.02□□□□□ -1.77
ECM16YMR128W NIP1P32497 812 aaKnown RBP4.02□□□□□ -1.77
ECM16YMR128W TRZ1P36159 838 aaPredicted RBP4.02□□□□□ -1.77
ECM16YMR128W PGM2P37012 569 aaKnown RBP4.02□□□□□ -1.77
ECM16YMR128W GAA1P39012 614 aa4.02□□□□□ -1.77
ECM16YMR128W YIL165CP40446 119 aa4.02□□□□□ -1.77
ECM16YMR128W MKT1P40850 830 aaKnown RBP4.02□□□□□ -1.77
ECM16YMR128W VTC4P47075 721 aa4.02□□□□□ -1.77
ECM16YMR128W ZIP2P53061 704 aa4.02□□□□□ -1.77
ECM16YMR128W YGR021WP53212 290 aa4.02□□□□□ -1.77
ECM16YMR128W PGA2P53903 129 aa4.02□□□□□ -1.77
ECM16YMR128W SPC24Q04477 213 aa4.02□□□□□ -1.77
ECM16YMR128W TAF10Q12030 206 aa4.02□□□□□ -1.77
ECM16YMR128W FKS1P38631 1876 aaKnown RBP4.02□□□□□ -1.77
ECM16YMR128W REC107P21651 314 aa4.02□□□□□ -1.77
ECM16YMR128W MRPS28P21771 286 aa4.02□□□□□ -1.77
ECM16YMR128W PLC1P32383 869 aa4.02□□□□□ -1.77
ECM16YMR128W UBC6P33296 250 aaPredicted RBP4.02□□□□□ -1.77
ECM16YMR128W SPF1P39986 1215 aaKnown RBP4.02□□□□□ -1.77
ECM16YMR128W ALG12P53730 551 aa4.02□□□□□ -1.77
ECM16YMR128W BNI5P53890 448 aaKnown RBP4.02□□□□□ -1.77
ECM16YMR128W GIR2Q03768 265 aaPredicted RBP4.02□□□□□ -1.77
ECM16YMR128W YKU80Q04437 629 aa4.02□□□□□ -1.77
ECM16YMR128W MDM38Q08179 573 aa4.02□□□□□ -1.77
ECM16YMR128W TY4A-HQ6Q5P6 413 aa4.02□□□□□ -1.77
ECM16YMR128W TOM1Q03280 3268 aa4.02□□□□□ -1.77
ECM16YMR128W PFK1P16861 987 aaKnown RBP4.01□□□□□ -1.77
ECM16YMR128W SAM2P19358 384 aaKnown RBP4.01□□□□□ -1.77
ECM16YMR128W GSY1P23337 708 aa4.01□□□□□ -1.77
ECM16YMR128W PYC2P32327 1180 aaKnown RBP4.01□□□□□ -1.77
ECM16YMR128W BUD2P33314 1104 aa4.01□□□□□ -1.77
ECM16YMR128W RRT2P38332 387 aa4.01□□□□□ -1.77
ECM16YMR128W LAM1P38851 1228 aa4.01□□□□□ -1.77
ECM16YMR128W CCT3P39077 534 aaKnown RBP4.01□□□□□ -1.77
ECM16YMR128W NPR2P39923 615 aa4.01□□□□□ -1.77
ECM16YMR128W MFM1Q02783 413 aa4.01□□□□□ -1.77
ECM16YMR128W YLH47Q06493 454 aa4.01□□□□□ -1.77
ECM16YMR128W MSG5P38590 489 aa4.01□□□□□ -1.77
ECM16YMR128W END3P39013 349 aa4.01□□□□□ -1.77
ECM16YMR128W RPN11P43588 306 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms