RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C SPT8P38915 602 aa4.78□□□□□ -1.64
CDC42YLR229C PES4P39684 611 aa4.78□□□□□ -1.64
CDC42YLR229C IRR1P40541 1150 aa4.78□□□□□ -1.64
CDC42YLR229C MMM1P41800 426 aa4.78□□□□□ -1.64
CDC42YLR229C YGL138CP53122 345 aa4.78□□□□□ -1.64
CDC42YLR229C FOL1P53848 824 aa4.78□□□□□ -1.64
CDC42YLR229C YMR102CQ03177 834 aa4.78□□□□□ -1.64
CDC42YLR229C GFD1Q04839 188 aaKnown RBP4.78□□□□□ -1.64
CDC42YLR229C SPP382Q06411 708 aaPredicted RBP4.78□□□□□ -1.64
CDC42YLR229C DSE3Q08729 430 aa4.78□□□□□ -1.64
CDC42YLR229C GNT1Q12096 491 aa4.78□□□□□ -1.64
CDC42YLR229C SPO21Q12411 609 aa4.78□□□□□ -1.64
CDC42YLR229C RPS9BP05755 195 aaKnown RBP4.77□□□□□ -1.65
CDC42YLR229C NUC1P08466 329 aa4.77□□□□□ -1.65
CDC42YLR229C THR4P16120 514 aaKnown RBP4.77□□□□□ -1.65
CDC42YLR229C ACE2P21192 770 aa4.77□□□□□ -1.65
CDC42YLR229C UBC1P21734 215 aaKnown RBP4.77□□□□□ -1.65
CDC42YLR229C SRM1P21827 482 aa4.77□□□□□ -1.65
CDC42YLR229C PUF4P25339 888 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
CDC42YLR229C CDC15P27636 974 aa4.77□□□□□ -1.65
CDC42YLR229C ADE17P38009 592 aaKnown RBP4.77□□□□□ -1.65
CDC42YLR229C PSY4P38193 441 aa4.77□□□□□ -1.65
CDC42YLR229C SHC1P39000 512 aa4.77□□□□□ -1.65
CDC42YLR229C CCT3P39077 534 aaKnown RBP4.77□□□□□ -1.65
CDC42YLR229C PXA1P41909 870 aa4.77□□□□□ -1.65
CDC42YLR229C YGL176CP46945 554 aa4.77□□□□□ -1.65
CDC42YLR229C MDM1Q01846 1127 aa4.77□□□□□ -1.65
CDC42YLR229C VPS30Q02948 557 aa4.77□□□□□ -1.65
CDC42YLR229C CRF1Q04930 467 aa4.77□□□□□ -1.65
CDC42YLR229C VPS38Q05919 439 aa4.77□□□□□ -1.65
CDC42YLR229C YOR059CQ08448 450 aaKnown RBP4.77□□□□□ -1.65
CDC42YLR229C YDR215CQ12240 137 aa4.77□□□□□ -1.65
CDC42YLR229C FLO11P08640 1367 aa4.77□□□□□ -1.65
CDC42YLR229C HIS4P00815 799 aaKnown RBP4.76□□□□□ -1.65
CDC42YLR229C TOP1P04786 769 aa4.76□□□□□ -1.65
CDC42YLR229C CHS2P14180 963 aa4.76□□□□□ -1.65
CDC42YLR229C KIP1P28742 1111 aa4.76□□□□□ -1.65
CDC42YLR229C CHS3P29465 1165 aa4.76□□□□□ -1.65
CDC42YLR229C CNS1P33313 385 aa4.76□□□□□ -1.65
CDC42YLR229C YKL069WP36088 180 aa4.76□□□□□ -1.65
CDC42YLR229C VBA5P36172 582 aa4.76□□□□□ -1.65
CDC42YLR229C SEA4P38164 1038 aa4.76□□□□□ -1.65
CDC42YLR229C STT3P39007 718 aaKnown RBP4.76□□□□□ -1.65
CDC42YLR229C BUD16P39988 312 aa4.76□□□□□ -1.65
CDC42YLR229C LYS14P40971 790 aa4.76□□□□□ -1.65
CDC42YLR229C YFL066CP43538 392 aa4.76□□□□□ -1.65
CDC42YLR229C CIT3P43635 486 aa4.76□□□□□ -1.65
CDC42YLR229C ERP6P53198 216 aa4.76□□□□□ -1.65
CDC42YLR229C CWC22P53333 577 aaKnown RBP4.76□□□□□ -1.65
CDC42YLR229C RET3P53600 189 aa4.76□□□□□ -1.65
CDC42YLR229C SMD2Q06217 110 aaKnown RBP4.76□□□□□ -1.65
CDC42YLR229C SKG3Q06315 1026 aa4.76□□□□□ -1.65
CDC42YLR229C ATG23Q06671 453 aa4.76□□□□□ -1.65
CDC42YLR229C NBA1Q08229 501 aaKnown RBP4.76□□□□□ -1.65
CDC42YLR229C ATG9Q12142 997 aa4.76□□□□□ -1.65
CDC42YLR229C SEC39Q12745 709 aa4.76□□□□□ -1.65
CDC42YLR229C PHO13P19881 312 aa4.75□□□□□ -1.65
CDC42YLR229C MSM1P22438 575 aa4.75□□□□□ -1.65
CDC42YLR229C CDC11P32458 415 aa4.75□□□□□ -1.65
CDC42YLR229C HIR1P32479 840 aa4.75□□□□□ -1.65
CDC42YLR229C ZUO1P32527 433 aaKnown RBP4.75□□□□□ -1.65
CDC42YLR229C SAS3P34218 831 aa4.75□□□□□ -1.65
CDC42YLR229C MUD2P36084 527 aaKnown RBP4.75□□□□□ -1.65
CDC42YLR229C YBL028CP38202 106 aa4.75□□□□□ -1.65
CDC42YLR229C CCZ1P38273 704 aa4.75□□□□□ -1.65
CDC42YLR229C YBR184WP38299 523 aa4.75□□□□□ -1.65
CDC42YLR229C EFM2P38347 419 aa4.75□□□□□ -1.65
CDC42YLR229C VPS45P38932 577 aa4.75□□□□□ -1.65
CDC42YLR229C ALT1P52893 592 aa4.75□□□□□ -1.65
CDC42YLR229C RRB1Q04225 511 aaKnown RBP4.75□□□□□ -1.65
CDC42YLR229C CSM3Q04659 317 aa4.75□□□□□ -1.65
CDC42YLR229C YDL124WQ07551 312 aaKnown RBP4.75□□□□□ -1.65
CDC42YLR229C PSR2Q07949 397 aa4.75□□□□□ -1.65
CDC42YLR229C SLK19Q08581 821 aaKnown RBP4.75□□□□□ -1.65
CDC42YLR229C PUS7Q08647 676 aaKnown RBP4.75□□□□□ -1.65
CDC42YLR229C TMA16Q08687 178 aa4.75□□□□□ -1.65
CDC42YLR229C AFT2Q08957 416 aa4.75□□□□□ -1.65
CDC42YLR229C TUF1P02992 437 aaKnown RBP4.74□□□□□ -1.65
CDC42YLR229C HSP60P19882 572 aaKnown RBP4.74□□□□□ -1.65
CDC42YLR229C ADP1P25371 1049 aa4.74□□□□□ -1.65
CDC42YLR229C ARE1P25628 610 aa4.74□□□□□ -1.65
CDC42YLR229C SRB4P32569 687 aa4.74□□□□□ -1.65
CDC42YLR229C PPG1P32838 368 aa4.74□□□□□ -1.65
CDC42YLR229C CST26P38226 397 aa4.74□□□□□ -1.65
CDC42YLR229C SAF1P38352 637 aa4.74□□□□□ -1.65
CDC42YLR229C BCD1P38772 366 aa4.74□□□□□ -1.65
CDC42YLR229C NMD3P38861 518 aaKnown RBP4.74□□□□□ -1.65
CDC42YLR229C GPB2P39717 880 aa4.74□□□□□ -1.65
CDC42YLR229C MPH1P40562 993 aa4.74□□□□□ -1.65
CDC42YLR229C HUL4P40985 892 aa4.74□□□□□ -1.65
CDC42YLR229C THI6P41835 540 aa4.74□□□□□ -1.65
CDC42YLR229C VTC2P43585 828 aa4.74□□□□□ -1.65
CDC42YLR229C FYV8P46949 817 aaKnown RBP4.74□□□□□ -1.65
CDC42YLR229C YJL045WP47052 634 aa4.74□□□□□ -1.65
CDC42YLR229C YGR153WP48238 217 aa4.74□□□□□ -1.65
CDC42YLR229C YGR237CP50089 785 aa4.74□□□□□ -1.65
CDC42YLR229C ASE1P50275 885 aa4.74□□□□□ -1.65
CDC42YLR229C UBA2P52488 636 aa4.74□□□□□ -1.65
CDC42YLR229C TAN1P53072 289 aaPredicted RBP4.74□□□□□ -1.65
CDC42YLR229C MTC3P53077 123 aa4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms