RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W POL31P46957 487 aa10.6□□□□□ -0.71
SHH4YLR164W ALT2P52892 507 aa10.6□□□□□ -0.71
SHH4YLR164W STP1Q00947 519 aa10.6□□□□□ -0.71
SHH4YLR164W FMP30Q02883 468 aa10.6□□□□□ -0.71
SHH4YLR164W VPS60Q03390 229 aa10.6□□□□□ -0.71
SHH4YLR164W RCR2Q03446 210 aaKnown RBP10.6□□□□□ -0.71
SHH4YLR164W TPK1P06244 397 aa10.59□□□□□ -0.71
SHH4YLR164W TIF1P10081 395 aaKnown RBP10.59□□□□□ -0.71
SHH4YLR164W TDA3P38758 523 aa10.59□□□□□ -0.71
SHH4YLR164W GEM1P39722 662 aa10.59□□□□□ -0.71
SHH4YLR164W LCP5P40079 357 aaPredicted RBP10.59□□□□□ -0.71
SHH4YLR164W OPT1P40897 799 aa10.59□□□□□ -0.71
SHH4YLR164W CWC22P53333 577 aaKnown RBP10.59□□□□□ -0.71
SHH4YLR164W SPC98P53540 846 aa10.59□□□□□ -0.71
SHH4YLR164W SLG1P54867 378 aa10.59□□□□□ -0.71
SHH4YLR164W MUB1Q03162 620 aa10.59□□□□□ -0.71
SHH4YLR164W MZM1Q03429 123 aaPredicted RBP10.59□□□□□ -0.71
SHH4YLR164W PKH2Q12236 1081 aaKnown RBP10.59□□□□□ -0.71
SHH4YLR164W FRE1P32791 686 aa10.58□□□□□ -0.72
SHH4YLR164W BUD2P33314 1104 aa10.58□□□□□ -0.72
SHH4YLR164W YBL036CP38197 257 aa10.58□□□□□ -0.72
SHH4YLR164W PSY2P40164 858 aa10.58□□□□□ -0.72
SHH4YLR164W RPT2P40327 437 aaKnown RBP10.58□□□□□ -0.72
SHH4YLR164W SPO74P45819 413 aa10.58□□□□□ -0.72
SHH4YLR164W PRP31P49704 494 aaPredicted RBP10.58□□□□□ -0.72
SHH4YLR164W MND1P53102 219 aa10.58□□□□□ -0.72
SHH4YLR164W YGR130CP53278 816 aa10.58□□□□□ -0.72
SHH4YLR164W JJJ1P53863 590 aa10.58□□□□□ -0.72
SHH4YLR164W URH1Q04179 340 aa10.58□□□□□ -0.72
SHH4YLR164W TRE1Q08919 783 aa10.58□□□□□ -0.72
SHH4YLR164W VPS54Q12071 889 aa10.58□□□□□ -0.72
SHH4YLR164W REC8Q12188 680 aa10.58□□□□□ -0.72
SHH4YLR164W SFI1Q12369 946 aa10.58□□□□□ -0.72
SHH4YLR164W EMP46Q12396 444 aa10.58□□□□□ -0.72
SHH4YLR164W SPO21Q12411 609 aa10.58□□□□□ -0.72
SHH4YLR164W RMP1Q12530 201 aa10.58□□□□□ -0.72
SHH4YLR164W YLR462WO13556 202 aa10.57□□□□□ -0.72
SHH4YLR164W ADK2P26364 225 aa10.57□□□□□ -0.72
SHH4YLR164W PEX2P32800 271 aa10.57□□□□□ -0.72
SHH4YLR164W ABZ1P37254 787 aaPredicted RBP10.57□□□□□ -0.72
SHH4YLR164W YHL049CP38722 271 aa10.57□□□□□ -0.72
SHH4YLR164W XDJ1P39102 459 aa10.57□□□□□ -0.72
SHH4YLR164W TMN3P40071 706 aa10.57□□□□□ -0.72
SHH4YLR164W DSE1P40077 573 aa10.57□□□□□ -0.72
SHH4YLR164W YER189WP40104 122 aa10.57□□□□□ -0.72
SHH4YLR164W SIP5P40210 489 aaKnown RBP10.57□□□□□ -0.72
SHH4YLR164W YFL064CP43540 174 aa10.57□□□□□ -0.72
SHH4YLR164W YJR054WP47114 497 aa10.57□□□□□ -0.72
SHH4YLR164W ESC8Q08119 714 aa10.57□□□□□ -0.72
SHH4YLR164W DIS3Q08162 1001 aaKnown RBP10.57□□□□□ -0.72
SHH4YLR164W YBL111CQ3E7Y5 667 aa10.57□□□□□ -0.72
SHH4YLR164W GAL80P04387 435 aa10.56□□□□□ -0.72
SHH4YLR164W BIO2P32451 375 aa10.56□□□□□ -0.72
SHH4YLR164W GCS1P35197 352 aa10.56□□□□□ -0.72
SHH4YLR164W NOP4P37838 685 aaKnown RBP10.56□□□□□ -0.72
SHH4YLR164W YMC2P38087 329 aa10.56□□□□□ -0.72
SHH4YLR164W RIM8P53179 542 aa10.56□□□□□ -0.72
SHH4YLR164W MAL13P53338 473 aa10.56□□□□□ -0.72
SHH4YLR164W NOP13P53883 403 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72not detected
SHH4YLR164W YNL011CP53980 444 aa10.56□□□□□ -0.72
SHH4YLR164W PNG1Q02890 363 aa10.56□□□□□ -0.72
SHH4YLR164W NOP14Q99207 810 aaKnown RBP10.56□□□□□ -0.72
SHH4YLR164W ADE3P07245 946 aaKnown RBP10.55□□□□□ -0.72
SHH4YLR164W DBF4P32325 704 aa10.55□□□□□ -0.72
SHH4YLR164W SLA2P33338 968 aa10.55□□□□□ -0.72
SHH4YLR164W YBL055CP34220 418 aaPredicted RBP10.55□□□□□ -0.72
SHH4YLR164W CCL1P37366 393 aa10.55□□□□□ -0.72
SHH4YLR164W SNZ3P43545 298 aa10.55□□□□□ -0.72
SHH4YLR164W SNZ2P53824 298 aa10.55□□□□□ -0.72
SHH4YLR164W ATG16Q03818 150 aa10.55□□□□□ -0.72
SHH4YLR164W ARO80Q04052 950 aa10.55□□□□□ -0.72
SHH4YLR164W TIF35Q04067 274 aaKnown RBP10.55□□□□□ -0.72
SHH4YLR164W RAD10P06838 210 aa10.54□□□□□ -0.72
SHH4YLR164W VPS3P23643 1011 aa10.54□□□□□ -0.72
SHH4YLR164W YEL043WP32618 956 aa10.54□□□□□ -0.72
SHH4YLR164W YBR284WP38150 797 aa10.54□□□□□ -0.72
SHH4YLR164W SIF2P38262 535 aa10.54□□□□□ -0.72
SHH4YLR164W YFL040WP43562 540 aa10.54□□□□□ -0.72
SHH4YLR164W HOP2P53187 214 aa10.54□□□□□ -0.72
SHH4YLR164W ELP3Q02908 557 aaKnown RBP10.54□□□□□ -0.72
SHH4YLR164W VTI1Q04338 217 aa10.54□□□□□ -0.72
SHH4YLR164W UFO1Q04511 668 aa10.54□□□□□ -0.72
SHH4YLR164W ECI1Q05871 280 aa10.54□□□□□ -0.72
SHH4YLR164W ATG23Q06671 453 aa10.54□□□□□ -0.72
SHH4YLR164W GAC1P28006 793 aa10.53□□□□□ -0.72
SHH4YLR164W GCG1P32656 232 aaKnown RBP10.53□□□□□ -0.72
SHH4YLR164W ABD1P32783 436 aaPredicted RBP10.53□□□□□ -0.72
SHH4YLR164W SEG2P34250 1132 aa10.53□□□□□ -0.72
SHH4YLR164W BYE1P36106 594 aa10.53□□□□□ -0.72
SHH4YLR164W RFS1P38234 210 aaKnown RBP10.53□□□□□ -0.72
SHH4YLR164W YHR202WP38887 602 aa10.53□□□□□ -0.72
SHH4YLR164W NOG2P53742 486 aaKnown RBP10.53□□□□□ -0.72
SHH4YLR164W TDA9Q04545 1251 aa10.53□□□□□ -0.72
SHH4YLR164W JIP3O13555 125 aa10.52□□□□□ -0.73
SHH4YLR164W PRC1P00729 532 aa10.52□□□□□ -0.73
SHH4YLR164W HAP2P06774 265 aa10.52□□□□□ -0.73
SHH4YLR164W TRX1P22217 103 aaKnown RBP10.52□□□□□ -0.73
SHH4YLR164W YBR056WP38081 501 aa10.52□□□□□ -0.73
SHH4YLR164W SPC72P39723 622 aa10.52□□□□□ -0.73
SHH4YLR164W MKT1P40850 830 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms