RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C FMO1P38866 432 aa4.46□□□□□ -1.7
YPT52YKR014C ADR1P07248 1323 aa4.46□□□□□ -1.7
YPT52YKR014C PYC1P11154 1178 aaKnown RBP4.45□□□□□ -1.7
YPT52YKR014C GFA1P14742 717 aaKnown RBP4.45□□□□□ -1.7
YPT52YKR014C SSZ1P38788 538 aaKnown RBP4.45□□□□□ -1.7
YPT52YKR014C SFB3P38810 929 aa4.45□□□□□ -1.7
YPT52YKR014C CRP1P38845 465 aaKnown RBP4.45□□□□□ -1.7
YPT52YKR014C FPR3P38911 411 aaKnown RBP4.45□□□□□ -1.7
YPT52YKR014C MGS1P40151 587 aa4.45□□□□□ -1.7
YPT52YKR014C GID8P40208 455 aa4.45□□□□□ -1.7
YPT52YKR014C QRI1P43123 477 aaKnown RBP4.45□□□□□ -1.7
YPT52YKR014C PAN2P53010 1115 aaPredicted RBP4.45□□□□□ -1.7
YPT52YKR014C ARP4P80428 489 aa4.45□□□□□ -1.7
YPT52YKR014C MRH1Q12117 320 aaPredicted RBP4.45□□□□□ -1.7
YPT52YKR014C ZRT2Q12436 422 aa4.45□□□□□ -1.7
YPT52YKR014C HRP1Q99383 534 aaKnown RBP4.45□□□□□ -1.7
YPT52YKR014C SIR3P06701 978 aa4.44□□□□□ -1.7
YPT52YKR014C HCA4P20448 770 aaKnown RBP4.44□□□□□ -1.7
YPT52YKR014C SEC15P22224 910 aa4.44□□□□□ -1.7
YPT52YKR014C PEX1P24004 1043 aa4.44□□□□□ -1.7
YPT52YKR014C DMC1P25453 334 aa4.44□□□□□ -1.7
YPT52YKR014C YHR202WP38887 602 aa4.44□□□□□ -1.7
YPT52YKR014C ARG2P40360 574 aa4.44□□□□□ -1.7
YPT52YKR014C YJR039WP47107 1121 aa4.44□□□□□ -1.7
YPT52YKR014C CTR1P49573 406 aa4.44□□□□□ -1.7
YPT52YKR014C DNM1P54861 757 aa4.44□□□□□ -1.7
YPT52YKR014C SMX3P54999 86 aaPredicted RBP4.44□□□□□ -1.7
YPT52YKR014C ISA1Q07821 250 aaPredicted RBP4.44□□□□□ -1.7
YPT52YKR014C YGR161W-CQ3E744 92 aa4.44□□□□□ -1.7
YPT52YKR014C ERG6P25087 383 aaKnown RBP4.43□□□□□ -1.7
YPT52YKR014C TDA3P38758 523 aa4.43□□□□□ -1.7
YPT52YKR014C LYS9P38999 446 aa4.43□□□□□ -1.7
YPT52YKR014C NDC80P40460 691 aa4.43□□□□□ -1.7
YPT52YKR014C BRE5P53741 515 aaKnown RBP4.43□□□□□ -1.7
YPT52YKR014C HMO1Q03973 246 aaKnown RBP4.43□□□□□ -1.7
YPT52YKR014C ERG20P08524 352 aaKnown RBP4.42□□□□□ -1.7
YPT52YKR014C AKL1P38080 1108 aaKnown RBP4.42□□□□□ -1.7
YPT52YKR014C CKB2P38930 258 aa4.42□□□□□ -1.7
YPT52YKR014C PIG2P40187 538 aa4.42□□□□□ -1.7
YPT52YKR014C RSC8P43609 557 aaKnown RBP4.42□□□□□ -1.7
YPT52YKR014C NOP9P47077 666 aaKnown RBP4.42□□□□□ -1.7
YPT52YKR014C PMT3P47190 753 aa4.42□□□□□ -1.7
YPT52YKR014C VHS3Q08438 674 aa4.42□□□□□ -1.7
YPT52YKR014C PHO11P35842 467 aa4.41□□□□□ -1.7
YPT52YKR014C GLG1P36143 616 aa4.41□□□□□ -1.7
YPT52YKR014C PHO12P38693 467 aa4.41□□□□□ -1.7
YPT52YKR014C YJL206CP39529 758 aa4.41□□□□□ -1.7
YPT52YKR014C GET2P40056 285 aa4.41□□□□□ -1.7
YPT52YKR014C RET2P43621 546 aa4.41□□□□□ -1.7
YPT52YKR014C ATG4P53867 494 aa4.41□□□□□ -1.7
YPT52YKR014C LEE1Q02799 301 aaKnown RBP4.41□□□□□ -1.7
YPT52YKR014C YMR210WQ03649 449 aa4.41□□□□□ -1.7
YPT52YKR014C THI73Q07904 523 aa4.41□□□□□ -1.7
YPT52YKR014C DCS2Q12123 353 aa4.41□□□□□ -1.7
YPT52YKR014C ECM3Q99252 613 aa4.41□□□□□ -1.7
YPT52YKR014C AIM44Q99299 758 aa4.41□□□□□ -1.7
YPT52YKR014C ABF1P14164 731 aa4.4□□□□□ -1.71
YPT52YKR014C PRP28P23394 588 aa4.4□□□□□ -1.71
YPT52YKR014C PRP19P32523 503 aaKnown RBP4.4□□□□□ -1.71
YPT52YKR014C TYS1P36421 394 aaKnown RBP4.4□□□□□ -1.71
YPT52YKR014C KIN82P25341 720 aa4.39□□□□□ -1.71
YPT52YKR014C PET127P32606 800 aa4.39□□□□□ -1.71
YPT52YKR014C TDP1P38319 544 aa4.39□□□□□ -1.71
YPT52YKR014C BIT2P38346 545 aa4.39□□□□□ -1.71
YPT52YKR014C HRB1P38922 454 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
YPT52YKR014C YNL195CP40168 261 aa4.39□□□□□ -1.71
YPT52YKR014C VPS73P53142 486 aaKnown RBP4.39□□□□□ -1.71
YPT52YKR014C FHN1P53279 174 aa4.39□□□□□ -1.71
YPT52YKR014C VBA4Q04602 768 aaKnown RBP4.39□□□□□ -1.71
YPT52YKR014C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
YPT52YKR014C RPS9BP05755 195 aaKnown RBP4.38□□□□□ -1.71
YPT52YKR014C PRP22P24384 1145 aaKnown RBP4.38□□□□□ -1.71
YPT52YKR014C NTH1P32356 751 aa4.38□□□□□ -1.71
YPT52YKR014C BCS1P32839 456 aa4.38□□□□□ -1.71
YPT52YKR014C BDH2P39713 417 aa4.38□□□□□ -1.71
YPT52YKR014C NUG1P40010 520 aaKnown RBP4.38□□□□□ -1.71
YPT52YKR014C YIL166CP40445 542 aa4.38□□□□□ -1.71
YPT52YKR014C YJR096WP47137 282 aa4.38□□□□□ -1.71
YPT52YKR014C YGR153WP48238 217 aa4.38□□□□□ -1.71
YPT52YKR014C THI22Q06490 572 aa4.38□□□□□ -1.71
YPT52YKR014C USV1Q12132 391 aa4.38□□□□□ -1.71
YPT52YKR014C POM34Q12445 299 aa4.38□□□□□ -1.71
YPT52YKR014C NUP145P49687 1317 aa4.38□□□□□ -1.71
YPT52YKR014C FRS1P15624 595 aaKnown RBP4.37□□□□□ -1.71
YPT52YKR014C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
YPT52YKR014C BEM4P39011 633 aa4.37□□□□□ -1.71
YPT52YKR014C YJR142WP47173 342 aa4.37□□□□□ -1.71
YPT52YKR014C UME1Q03010 460 aa4.37□□□□□ -1.71
YPT52YKR014C HFD1Q04458 532 aa4.37□□□□□ -1.71
YPT52YKR014C YLR407WQ06070 228 aa4.37□□□□□ -1.71
YPT52YKR014C MLH3Q12083 715 aa4.37□□□□□ -1.71
YPT52YKR014C CHS5Q12114 671 aaKnown RBP4.37□□□□□ -1.71
YPT52YKR014C TAF3Q12297 353 aa4.37□□□□□ -1.71
YPT52YKR014C RPN13O13563 156 aa4.36□□□□□ -1.71
YPT52YKR014C THR1P17423 357 aaKnown RBP4.36□□□□□ -1.71
YPT52YKR014C IMG2P25642 146 aaPredicted RBP4.36□□□□□ -1.71
YPT52YKR014C GZF3P42944 551 aaKnown RBP4.36□□□□□ -1.71
YPT52YKR014C TAH11P47112 604 aa4.36□□□□□ -1.71
YPT52YKR014C YNR029CP53729 429 aaKnown RBP4.36□□□□□ -1.71
YPT52YKR014C MTQ2Q03920 221 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms