RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	FAL1	Q12099	399 aa	Known RBP	5.2	□□□□□ -1.58
DOA1	YKL213C	RIF1	P29539	1916 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	SPS1	P08458	490 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	SPO11	P23179	398 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	APL1	P27351	700 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	SEC65	P29478	273 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	SKG6	P32900	734 aa	Predicted RBP	5.2	□□□□□ -1.58
DOA1	YKL213C	ATG14	P38270	344 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	NPP2	P39997	493 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	FIG4	P42837	879 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	FYV8	P46949	817 aa	Known RBP	5.2	□□□□□ -1.58
DOA1	YKL213C	ASN1	P49089	572 aa	Known RBP	5.2	□□□□□ -1.58
DOA1	YKL213C	MUK1	Q02866	612 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	SPO19	Q03029	223 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	TRS130	Q03660	1102 aa		5.2	□□□□□ -1.58
DOA1	YKL213C	UTP14	Q04500	899 aa	Known RBP	5.2	□□□□□ -1.58
DOA1	YKL213C	CWC2	Q12046	339 aa	Predicted RBP	5.2	□□□□□ -1.58
DOA1	YKL213C	RAD3	P06839	778 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	PET494	P07390	489 aa	Predicted RBP	5.19	□□□□□ -1.58
DOA1	YKL213C	PHO13	P19881	312 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	MCM2	P29469	868 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	DPH5	P32469	300 aa	Predicted RBP	5.19	□□□□□ -1.58
DOA1	YKL213C	DRE2	P36152	348 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	MRX3	P38172	270 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	NDC80	P40460	691 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	RIP-Chip
DOA1	YKL213C	HSH155	P49955	971 aa	Known RBP	5.19	□□□□□ -1.58
DOA1	YKL213C	VPS75	P53853	264 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	RSM28	Q03430	361 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	EMI2	Q04409	500 aa	Known RBP	5.19	□□□□□ -1.58
DOA1	YKL213C	ATG38	Q05789	226 aa	Known RBP	5.19	□□□□□ -1.58
DOA1	YKL213C	YOL098C	Q12496	1037 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	ZPS1	Q12512	249 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	YIL002W-A	Q3E7Z5	69 aa		5.19	□□□□□ -1.58
DOA1	YKL213C	COX4	P04037	155 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	TOM70	P07213	617 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	MEF1	P25039	761 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	ABZ1	P37254	787 aa	Predicted RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	MMS4	P38257	691 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	HSE1	P38753	452 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	FTR1	P40088	404 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	FMP10	P40098	244 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	SEC26	P41810	973 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	COS5	P47187	383 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	HFM1	P51979	1187 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	EFM5	P53200	248 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	SKY1	Q03656	742 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	MSH6	Q03834	1242 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	SSQ1	Q05931	657 aa	Predicted RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	CSR1	Q06705	408 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	YOR352W	Q08816	343 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	PRT1	P06103	763 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	HOM3	P10869	527 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	PMS1	P14242	873 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	GLN3	P18494	730 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	ADE2	P21264	571 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	AAD3	P25612	363 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	BUD2	P33314	1104 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
DOA1	YKL213C	PXL1	P36166	706 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	JNM1	P36224	373 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	DOT6	P40059	670 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	ADE12	P80210	433 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	RPN4	Q03465	531 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	DOT1	Q04089	582 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	RAD33	Q04231	177 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	POB3	Q04636	552 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	YLR297W	Q05899	129 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	MAG2	Q06436	670 aa	Known RBP	5.18	□□□□□ -1.58
DOA1	YKL213C	SHS1	Q07657	551 aa		5.18	□□□□□ -1.58
DOA1	YKL213C	IDI1	P15496	288 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	YKL023W	P36103	277 aa	Known RBP	5.17	□□□□□ -1.58
DOA1	YKL213C	CCL1	P37366	393 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	RTT107	P38850	1070 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	YAP1801	P38856	637 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	CAJ1	P39101	391 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	VFA1	P40080	203 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	OPT1	P40897	799 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	GCV2	P49095	1034 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	YGR016W	P53209	190 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	ALG12	P53730	551 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	YNL134C	P53912	376 aa	Known RBP	5.17	□□□□□ -1.58
DOA1	YKL213C	YLR287C	Q05881	355 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	PCD1	Q12524	340 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	ADE4	P04046	510 aa	Known RBP	5.17	□□□□□ -1.58
DOA1	YKL213C	RPL4A	P10664	362 aa	Known RBP	5.17	□□□□□ -1.58
DOA1	YKL213C	SEC15	P22224	910 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	URK1	P27515	501 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	RPT1	P33299	467 aa	Known RBP	5.17	□□□□□ -1.58
DOA1	YKL213C	NUF2	P33895	451 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	TBS1	P38114	1094 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	UBX7	P38349	436 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	PEX18	P38855	283 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	MET18	P40469	1032 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	STR2	P47164	639 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	RPL4B	P49626	362 aa	Known RBP	5.17	□□□□□ -1.58
DOA1	YKL213C	INP52	P50942	1183 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	RRN11	Q04712	507 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	ARR2	Q06597	130 aa		5.17	□□□□□ -1.58
DOA1	YKL213C	SWA2	Q06677	668 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms