RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	DID4	P36108	232 aa		4.1	□□□□□ -1.75
TPK3	YKL166C	CHS7	P38843	316 aa		4.1	□□□□□ -1.75
TPK3	YKL166C	YHR202W	P38887	602 aa		4.1	□□□□□ -1.75
TPK3	YKL166C	LYS9	P38999	446 aa		4.1	□□□□□ -1.75
TPK3	YKL166C	GSF2	Q04697	403 aa	Known RBP	4.1	□□□□□ -1.75
TPK3	YKL166C	RPS21B	Q3E754	87 aa	Known RBP	4.1	□□□□□ -1.75
TPK3	YKL166C	SWI6	P09959	803 aa		4.09	□□□□□ -1.75
TPK3	YKL166C	SSB1	P11484	613 aa	Known RBP	4.09	□□□□□ -1.75
TPK3	YKL166C	RNR1	P21524	888 aa	Known RBP	4.09	□□□□□ -1.75
TPK3	YKL166C	SSB2	P40150	613 aa	Known RBP	4.09	□□□□□ -1.75
TPK3	YKL166C	YJL163C	P46996	555 aa		4.09	□□□□□ -1.75
TPK3	YKL166C	MTL1	P53214	551 aa		4.09	□□□□□ -1.75
TPK3	YKL166C	ISA1	Q07821	250 aa	Predicted RBP	4.09	□□□□□ -1.75
TPK3	YKL166C	HFI1	Q12060	488 aa		4.09	□□□□□ -1.75
TPK3	YKL166C	APM4	Q99186	491 aa		4.09	□□□□□ -1.75
TPK3	YKL166C	RPS21A	P0C0V8	87 aa	Known RBP	4.08	□□□□□ -1.76
TPK3	YKL166C	EUG1	P32474	517 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	OAF3	P36023	863 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	YKR075C	P36155	307 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	PAF1	P38351	445 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	BCD1	P38772	366 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	GET2	P40056	285 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	YNL195C	P40168	261 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	NOP9	P47077	666 aa	Known RBP	4.08	□□□□□ -1.76
TPK3	YKL166C	BFA1	P47113	574 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	UBC11	P52492	156 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	CTK1	Q03957	528 aa	Known RBP	4.08	□□□□□ -1.76
TPK3	YKL166C	YLR407W	Q06070	228 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	IRC13	Q08630	104 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	TMA17	Q12513	150 aa		4.08	□□□□□ -1.76
TPK3	YKL166C	IMG2	P25642	146 aa	Predicted RBP	4.07	□□□□□ -1.76
TPK3	YKL166C	SEC65	P29478	273 aa		4.07	□□□□□ -1.76
TPK3	YKL166C	YKU70	P32807	602 aa		4.07	□□□□□ -1.76
TPK3	YKL166C	YPT7	P32939	208 aa		4.07	□□□□□ -1.76
TPK3	YKL166C	PPS1	P38148	807 aa		4.07	□□□□□ -1.76
TPK3	YKL166C	FMO1	P38866	432 aa		4.07	□□□□□ -1.76
TPK3	YKL166C	CCT3	P39077	534 aa	Known RBP	4.07	□□□□□ -1.76
TPK3	YKL166C	DUG1	P43616	481 aa	Known RBP	4.07	□□□□□ -1.76
TPK3	YKL166C	COX18	P53239	316 aa		4.07	□□□□□ -1.76
TPK3	YKL166C	SLI1	P53304	468 aa		4.07	□□□□□ -1.76
TPK3	YKL166C	YHM2	Q04013	314 aa		4.07	□□□□□ -1.76
TPK3	YKL166C	PEX1	P24004	1043 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	MRC1	P25588	1096 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	HIR1	P32479	840 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	FAT1	P38225	669 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	NUP60	P39705	539 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	GPP2	P40106	250 aa	Known RBP	4.06	□□□□□ -1.76
TPK3	YKL166C	RSC8	P43609	557 aa	Known RBP	4.06	□□□□□ -1.76
TPK3	YKL166C	YJR120W	P47157	116 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	PTA1	Q01329	785 aa	Predicted RBP	4.06	□□□□□ -1.76
TPK3	YKL166C	YMR210W	Q03649	449 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	RGC1	Q06108	1083 aa	Known RBP	4.06	□□□□□ -1.76
TPK3	YKL166C	VPS36	Q06696	566 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	VHS3	Q08438	674 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	SGO1	Q08490	590 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	ECM3	Q99252	613 aa		4.06	□□□□□ -1.76
TPK3	YKL166C	SIR3	P06701	978 aa		4.05	□□□□□ -1.76
TPK3	YKL166C	FRS1	P15624	595 aa	Known RBP	4.05	□□□□□ -1.76
TPK3	YKL166C	IME1	P21190	360 aa		4.05	□□□□□ -1.76
TPK3	YKL166C	DAL3	P32459	195 aa		4.05	□□□□□ -1.76
TPK3	YKL166C	PET127	P32606	800 aa		4.05	□□□□□ -1.76
TPK3	YKL166C	HIS7	P33734	552 aa	Known RBP	4.05	□□□□□ -1.76
TPK3	YKL166C	YBR071W	P38243	211 aa		4.05	□□□□□ -1.76
TPK3	YKL166C	FMP52	P40008	231 aa		4.05	□□□□□ -1.76
TPK3	YKL166C	NOP15	P53927	220 aa	Predicted RBP	4.05	□□□□□ -1.76
TPK3	YKL166C	YPS7	Q06325	596 aa		4.05	□□□□□ -1.76
TPK3	YKL166C	THI22	Q06490	572 aa		4.05	□□□□□ -1.76
TPK3	YKL166C	TRE2	Q08693	809 aa		4.05	□□□□□ -1.76
TPK3	YKL166C	RPS17A	P02407	136 aa	Known RBP	4.04	□□□□□ -1.76
TPK3	YKL166C	RPS17B	P14127	136 aa	Known RBP	4.04	□□□□□ -1.76
TPK3	YKL166C	AEP2	P22136	580 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	MVD1	P32377	396 aa	Known RBP	4.04	□□□□□ -1.76
TPK3	YKL166C	SEC6	P32844	805 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	REV7	P38927	245 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	NIT2	P47016	307 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	BIT61	P47041	543 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	PAN2	P53010	1115 aa	Predicted RBP	4.04	□□□□□ -1.76
TPK3	YKL166C	FOL1	P53848	824 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	COG6	P53959	839 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	CTF4	Q01454	927 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	RCR2	Q03446	210 aa	Known RBP	4.04	□□□□□ -1.76
TPK3	YKL166C	OMS1	Q06668	471 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	STP4	Q07351	490 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	DIA2	Q08496	732 aa	Predicted RBP	4.04	□□□□□ -1.76
TPK3	YKL166C	PNS1	Q12412	539 aa		4.04	□□□□□ -1.76
TPK3	YKL166C	GLN4	P13188	809 aa	Known RBP	4.03	□□□□□ -1.76
TPK3	YKL166C	SER1	P33330	395 aa	Known RBP	4.03	□□□□□ -1.76
TPK3	YKL166C	ENP1	P38333	483 aa	Known RBP	4.03	□□□□□ -1.76
TPK3	YKL166C	SFB3	P38810	929 aa		4.03	□□□□□ -1.76
TPK3	YKL166C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
TPK3	YKL166C	IES1	P43579	692 aa		4.03	□□□□□ -1.76
TPK3	YKL166C	DAS1	P47005	663 aa		4.03	□□□□□ -1.76
TPK3	YKL166C	TEL2	P53038	688 aa		4.03	□□□□□ -1.76
TPK3	YKL166C	RIA1	P53893	1110 aa		4.03	□□□□□ -1.76
TPK3	YKL166C	MUK1	Q02866	612 aa		4.03	□□□□□ -1.76
TPK3	YKL166C	POM34	Q12445	299 aa		4.03	□□□□□ -1.76
TPK3	YKL166C	RMP1	Q12530	201 aa		4.03	□□□□□ -1.76
TPK3	YKL166C	YKL033W-A	Q86ZR7	236 aa		4.03	□□□□□ -1.76
TPK3	YKL166C	ERG20	P08524	352 aa	Known RBP	4.02	□□□□□ -1.77
TPK3	YKL166C	CDC26	P14724	124 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms