RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C TEP1P53916 434 aa2□□□□□ -2.09
HIR3YJR140C EAR1Q03212 550 aa2□□□□□ -2.09
HIR3YJR140C TGL5Q12043 749 aa2□□□□□ -2.09
HIR3YJR140C CYC7P00045 113 aa2□□□□□ -2.09
HIR3YJR140C GAL1P04385 528 aa2□□□□□ -2.09
HIR3YJR140C MET3P08536 511 aa2□□□□□ -2.09
HIR3YJR140C PYC1P11154 1178 aaKnown RBP2□□□□□ -2.09
HIR3YJR140C SKN7P38889 622 aa2□□□□□ -2.09
HIR3YJR140C RRP8P38961 392 aaKnown RBP2□□□□□ -2.09
HIR3YJR140C PXA1P41909 870 aa2□□□□□ -2.09
HIR3YJR140C SQS1P53866 767 aaKnown RBP2□□□□□ -2.09
HIR3YJR140C NEW1Q08972 1196 aaKnown RBP2□□□□□ -2.09
HIR3YJR140C PHO3P24031 467 aa2□□□□□ -2.09
HIR3YJR140C NTH1P32356 751 aa2□□□□□ -2.09
HIR3YJR140C UTP9P38882 575 aaKnown RBP2□□□□□ -2.09
HIR3YJR140C IES5P40060 125 aa2□□□□□ -2.09
HIR3YJR140C HIS6P40545 261 aa2□□□□□ -2.09
HIR3YJR140C LRS4Q04087 347 aaKnown RBP2□□□□□ -2.09
HIR3YJR140C GAS5Q08193 484 aa2□□□□□ -2.09
HIR3YJR140C GPB1Q08886 897 aa2□□□□□ -2.09
HIR3YJR140C PFK2P16862 959 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
HIR3YJR140C CWH43P25618 953 aa2□□□□□ -2.09
HIR3YJR140C TGL1P34163 548 aa2□□□□□ -2.09
HIR3YJR140C ERP2P39704 215 aa2□□□□□ -2.09
HIR3YJR140C IES1P43579 692 aa2□□□□□ -2.09
HIR3YJR140C TY4A-JP47023 414 aa2□□□□□ -2.09
HIR3YJR140C PRP31P49704 494 aaPredicted RBP2□□□□□ -2.09
HIR3YJR140C TEL2P53038 688 aa2□□□□□ -2.09
HIR3YJR140C YDR338CQ05497 695 aa2□□□□□ -2.09
HIR3YJR140C RCL1Q08096 367 aaPredicted RBP2□□□□□ -2.09
HIR3YJR140C VHS3Q08438 674 aa2□□□□□ -2.09
HIR3YJR140C HOS1Q12214 470 aa2□□□□□ -2.09
HIR3YJR140C MPD2Q99316 277 aa2□□□□□ -2.09
HIR3YJR140C PUB1P32588 453 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
HIR3YJR140C YKR051WP36142 418 aa1.99□□□□□ -2.09
HIR3YJR140C NOP4P37838 685 aaKnown RBP1.99□□□□□ -2.09
HIR3YJR140C PSY4P38193 441 aa1.99□□□□□ -2.09
HIR3YJR140C LAM1P38851 1228 aa1.99□□□□□ -2.09
HIR3YJR140C PIG2P40187 538 aa1.99□□□□□ -2.09
HIR3YJR140C YFL066CP43538 392 aa1.99□□□□□ -2.09
HIR3YJR140C YJR120WP47157 116 aa1.99□□□□□ -2.09
HIR3YJR140C UBC9P50623 157 aaPredicted RBP1.99□□□□□ -2.09
HIR3YJR140C RIM8P53179 542 aa1.99□□□□□ -2.09
HIR3YJR140C YAP1802P53309 568 aa1.99□□□□□ -2.09
HIR3YJR140C YNL034WP53963 612 aa1.99□□□□□ -2.09
HIR3YJR140C YNL018CP53976 612 aa1.99□□□□□ -2.09
HIR3YJR140C MTD1Q02046 320 aaKnown RBP1.99□□□□□ -2.09
HIR3YJR140C CTK1Q03957 528 aaKnown RBP1.99□□□□□ -2.09
HIR3YJR140C RGA2Q06407 1009 aa1.99□□□□□ -2.09
HIR3YJR140C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
HIR3YJR140C UPC2Q12151 913 aa1.99□□□□□ -2.09
HIR3YJR140C RRI2Q12348 645 aa1.99□□□□□ -2.09
HIR3YJR140C YLR149CQ99296 730 aa1.99□□□□□ -2.09
HIR3YJR140C GAL10P04397 699 aa1.99□□□□□ -2.09
HIR3YJR140C NPP2P39997 493 aa1.99□□□□□ -2.09
HIR3YJR140C TMA108P40462 946 aa1.99□□□□□ -2.09
HIR3YJR140C PRY1P47032 299 aa1.99□□□□□ -2.09
HIR3YJR140C ACK1Q07622 623 aaPredicted RBP1.99□□□□□ -2.09
HIR3YJR140C ZRT2Q12436 422 aa1.99□□□□□ -2.09
HIR3YJR140C ABF1P14164 731 aa1.99□□□□□ -2.09
HIR3YJR140C MDJ1P35191 511 aa1.99□□□□□ -2.09
HIR3YJR140C NUP120P35729 1037 aa1.99□□□□□ -2.09
HIR3YJR140C CHA4P43634 648 aa1.99□□□□□ -2.09
HIR3YJR140C CLU1Q03690 1277 aaKnown RBP1.99□□□□□ -2.09
HIR3YJR140C DCS2Q12123 353 aa1.99□□□□□ -2.09
HIR3YJR140C LPX1Q12405 387 aaKnown RBP1.99□□□□□ -2.09
HIR3YJR140C PIF1P07271 859 aa1.99□□□□□ -2.09
HIR3YJR140C PCK1P10963 549 aa1.99□□□□□ -2.09
HIR3YJR140C HXT6P39003 570 aaKnown RBP1.99□□□□□ -2.09
HIR3YJR140C HXT7P39004 570 aa1.99□□□□□ -2.09
HIR3YJR140C YIR042CP40586 236 aa1.99□□□□□ -2.09
HIR3YJR140C PRP43P53131 767 aaKnown RBP1.99□□□□□ -2.09
HIR3YJR140C VPS62P53285 467 aa1.99□□□□□ -2.09
HIR3YJR140C NOP15P53927 220 aaPredicted RBP1.99□□□□□ -2.09
HIR3YJR140C ARG5,6Q01217 863 aa1.99□□□□□ -2.09
HIR3YJR140C COG4Q06096 861 aa1.99□□□□□ -2.09
HIR3YJR140C HAL9Q12180 1030 aa1.99□□□□□ -2.09
HIR3YJR140C CYC1P00044 109 aaPredicted RBP1.98□□□□□ -2.09
HIR3YJR140C GCD7P32502 381 aaPredicted RBP1.98□□□□□ -2.09
HIR3YJR140C AKL1P38080 1108 aaKnown RBP1.98□□□□□ -2.09
HIR3YJR140C ERT1P38140 529 aa1.98□□□□□ -2.09
HIR3YJR140C TOS1P38288 455 aa1.98□□□□□ -2.09
HIR3YJR140C FSH1P38777 243 aaKnown RBP1.98□□□□□ -2.09
HIR3YJR140C SAK1P38990 1142 aa1.98□□□□□ -2.09
HIR3YJR140C YIL092WP40497 633 aa1.98□□□□□ -2.09
HIR3YJR140C TAF4P50105 388 aa1.98□□□□□ -2.09
HIR3YJR140C GCN5Q03330 439 aa1.98□□□□□ -2.09
HIR3YJR140C PEX19Q07418 342 aa1.98□□□□□ -2.09
HIR3YJR140C VAS1P07806 1104 aaKnown RBP1.98□□□□□ -2.09
HIR3YJR140C IMP2'P32351 346 aa1.98□□□□□ -2.09
HIR3YJR140C YHL041WP38730 149 aa1.98□□□□□ -2.09
HIR3YJR140C PRM2P40534 656 aa1.98□□□□□ -2.09
HIR3YJR140C VID28P40547 921 aa1.98□□□□□ -2.09
HIR3YJR140C MRPL13Q02204 264 aa1.98□□□□□ -2.09
HIR3YJR140C YPL062WQ02781 134 aa1.98□□□□□ -2.09
HIR3YJR140C SFI1Q12369 946 aa1.98□□□□□ -2.09
HIR3YJR140C CTT1P06115 562 aa1.98□□□□□ -2.09
HIR3YJR140C CBP3P21560 335 aa1.98□□□□□ -2.09
HIR3YJR140C PRP28P23394 588 aa1.98□□□□□ -2.09
HIR3YJR140C PRE8P23639 250 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms