RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C CLB1P24868 471 aa3.17□□□□□ -1.9
NMD2YHR077C YME1P32795 747 aa3.17□□□□□ -1.9
NMD2YHR077C KSP1P38691 1029 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C HMF1P40037 129 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C ATG36P46983 293 aa3.17□□□□□ -1.9
NMD2YHR077C VPS53P47061 822 aa3.17□□□□□ -1.9
NMD2YHR077C SUB1P54000 292 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C NOB1Q08444 459 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C CFT2Q12102 859 aaPredicted RBP3.17□□□□□ -1.9
NMD2YHR077C AIM7Q12156 149 aa3.17□□□□□ -1.9
NMD2YHR077C YDR018CQ12185 396 aa3.17□□□□□ -1.9
NMD2YHR077C RPB2P08518 1224 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C ASP3-2P0CX77 362 aa3.17□□□□□ -1.9
NMD2YHR077C ASP3-3P0CX78 362 aa3.17□□□□□ -1.9
NMD2YHR077C ASP3-4P0CX79 362 aa3.17□□□□□ -1.9
NMD2YHR077C ASP3-1P0CZ17 362 aa3.17□□□□□ -1.9
NMD2YHR077C SRV2P17555 526 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C ARG1P22768 420 aa3.17□□□□□ -1.9
NMD2YHR077C CDC10P25342 322 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C DBF4P32325 704 aa3.17□□□□□ -1.9
NMD2YHR077C ABD1P32783 436 aaPredicted RBP3.17□□□□□ -1.9
NMD2YHR077C TFC4P33339 1025 aa3.17□□□□□ -1.9
NMD2YHR077C OAF1P39720 1047 aaPredicted RBP3.17□□□□□ -1.9
NMD2YHR077C YMR134WP40207 237 aa3.17□□□□□ -1.9
NMD2YHR077C ALA1P40825 983 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C SCY1P53009 804 aa3.17□□□□□ -1.9
NMD2YHR077C CUL3P53202 744 aa3.17□□□□□ -1.9
NMD2YHR077C NOG2P53742 486 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C SLT2Q00772 484 aa3.17□□□□□ -1.9
NMD2YHR077C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
NMD2YHR077C ABP140Q08641 628 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C RRD2Q12461 358 aa3.17□□□□□ -1.9
NMD2YHR077C TRM11Q12463 433 aa3.17□□□□□ -1.9
NMD2YHR077C TUB3P09734 445 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C NAT1P12945 854 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C GLN3P18494 730 aa3.17□□□□□ -1.9
NMD2YHR077C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
NMD2YHR077C PCS60P38137 543 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
NMD2YHR077C TIF5P38431 405 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C EAF5P39995 279 aa3.17□□□□□ -1.9
NMD2YHR077C FTR1P40088 404 aa3.17□□□□□ -1.9
NMD2YHR077C PSY2P40164 858 aa3.17□□□□□ -1.9
NMD2YHR077C ARG2P40360 574 aa3.17□□□□□ -1.9
NMD2YHR077C TMA22P47089 198 aaPredicted RBP3.17□□□□□ -1.9
NMD2YHR077C RNT1Q02555 471 aa3.17□□□□□ -1.9
NMD2YHR077C YPL062WQ02781 134 aa3.17□□□□□ -1.9
NMD2YHR077C YDR090CQ03193 310 aa3.17□□□□□ -1.9
NMD2YHR077C CWC15Q03772 175 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C ERV41Q04651 352 aa3.17□□□□□ -1.9
NMD2YHR077C CDD1Q06549 142 aa3.17□□□□□ -1.9
NMD2YHR077C RUD3Q12234 484 aaKnown RBP3.17□□□□□ -1.9
NMD2YHR077C QCR6P00127 147 aa3.16□□□□□ -1.9
NMD2YHR077C SAT4P25333 603 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C CDC48P25694 835 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C FRE1P32791 686 aa3.16□□□□□ -1.9
NMD2YHR077C BCS1P32839 456 aa3.16□□□□□ -1.9
NMD2YHR077C MOT2P34909 587 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C VID24P38263 362 aa3.16□□□□□ -1.9
NMD2YHR077C PCA1P38360 1216 aa3.16□□□□□ -1.9
NMD2YHR077C QNS1P38795 714 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C VAB2P40003 282 aa3.16□□□□□ -1.9
NMD2YHR077C TMA108P40462 946 aa3.16□□□□□ -1.9
NMD2YHR077C TAH11P47112 604 aa3.16□□□□□ -1.9
NMD2YHR077C LSC1P53598 329 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C VPS16Q03308 798 aa3.16□□□□□ -1.9
NMD2YHR077C FAR8Q05040 523 aa3.16□□□□□ -1.9
NMD2YHR077C GPI13Q07830 1017 aa3.16□□□□□ -1.9
NMD2YHR077C CMS1Q07897 291 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C SMC5Q08204 1093 aa3.16□□□□□ -1.9
NMD2YHR077C CDC19P00549 500 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C TEF1P02994 458 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C CHS1P08004 1131 aa3.16□□□□□ -1.9
NMD2YHR077C SSA1P10591 642 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C YSC84P32793 468 aa3.16□□□□□ -1.9
NMD2YHR077C AIM26P32858 118 aa3.16□□□□□ -1.9
NMD2YHR077C SRP101P32916 621 aa3.16□□□□□ -1.9
NMD2YHR077C RPT1P33299 467 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C ATG19P35193 415 aa3.16□□□□□ -1.9
NMD2YHR077C AGP2P38090 596 aa3.16□□□□□ -1.9
NMD2YHR077C DSF2P38213 736 aa3.16□□□□□ -1.9
NMD2YHR077C YER186CP40101 306 aa3.16□□□□□ -1.9
NMD2YHR077C INA22P40576 216 aa3.16□□□□□ -1.9
NMD2YHR077C SNZ3P43545 298 aa3.16□□□□□ -1.9
NMD2YHR077C HUL5P53119 910 aa3.16□□□□□ -1.9
NMD2YHR077C SNZ2P53824 298 aa3.16□□□□□ -1.9
NMD2YHR077C NMA111P53920 997 aa3.16□□□□□ -1.9
NMD2YHR077C BUD22Q04347 519 aaKnown RBP3.16□□□□□ -1.9
NMD2YHR077C TRE1Q08919 783 aa3.16□□□□□ -1.9
NMD2YHR077C VPS54Q12071 889 aa3.16□□□□□ -1.9
NMD2YHR077C YPR027CQ12079 277 aa3.16□□□□□ -1.9
NMD2YHR077C POX1P13711 748 aa3.15□□□□□ -1.9
NMD2YHR077C TSR4P25040 408 aa3.15□□□□□ -1.9
NMD2YHR077C COQ8P27697 501 aa3.15□□□□□ -1.9
NMD2YHR077C HXT3P32466 567 aaKnown RBP3.15□□□□□ -1.9
NMD2YHR077C YKR018CP36114 725 aa3.15□□□□□ -1.9
NMD2YHR077C NMD3P38861 518 aaKnown RBP3.15□□□□□ -1.9
NMD2YHR077C SAK1P38990 1142 aa3.15□□□□□ -1.9
NMD2YHR077C FLC2P39719 783 aa3.15□□□□□ -1.9
NMD2YHR077C AXL1P40851 1208 aa3.15□□□□□ -1.9
NMD2YHR077C SAE2P46946 345 aa3.15□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms