RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C TY1B-PR1P0C2I9 1755 aaKnown RBP3.55□□□□□ -1.84
TCD1YHR003C TY1B-PR2P0C2J0 1756 aa3.55□□□□□ -1.84
TCD1YHR003C TY1B-PR3P0C2J1 1755 aaKnown RBP3.55□□□□□ -1.84
TCD1YHR003C TY1B-JR1P47098 1755 aa3.55□□□□□ -1.84
TCD1YHR003C TY1B-ML2Q03434 1755 aaKnown RBP3.55□□□□□ -1.84
TCD1YHR003C TY1B-ER1Q03612 1755 aa3.55□□□□□ -1.84
TCD1YHR003C TY1B-ML1Q04711 1755 aaKnown RBP3.55□□□□□ -1.84
TCD1YHR003C TY1B-GR2Q12269 1755 aa3.55□□□□□ -1.84
TCD1YHR003C TY1B-OLQ12273 1755 aa3.55□□□□□ -1.84
TCD1YHR003C TY1B-PLQ12414 1755 aaKnown RBP3.55□□□□□ -1.84
TCD1YHR003C SIN3P22579 1536 aa3.54□□□□□ -1.84
TCD1YHR003C VBA3P25594 458 aa3.54□□□□□ -1.84
TCD1YHR003C GRX4P32642 244 aa3.54□□□□□ -1.84
TCD1YHR003C PEX6P33760 1030 aa3.54□□□□□ -1.84
TCD1YHR003C PMC1P38929 1173 aaPredicted RBP3.54□□□□□ -1.84
TCD1YHR003C STU2P46675 888 aa3.54□□□□□ -1.84
TCD1YHR003C PRP31P49704 494 aaPredicted RBP3.54□□□□□ -1.84
TCD1YHR003C NPY1P53164 384 aa3.54□□□□□ -1.84
TCD1YHR003C ORC4P54791 529 aa3.54□□□□□ -1.84
TCD1YHR003C GAD1Q04792 585 aa3.54□□□□□ -1.84
TCD1YHR003C HBT1Q07653 1046 aaKnown RBP3.54□□□□□ -1.84
TCD1YHR003C MEF1P25039 761 aa3.53□□□□□ -1.84
TCD1YHR003C HOS4P40480 1083 aa3.53□□□□□ -1.84
TCD1YHR003C BAP3P41815 604 aa3.53□□□□□ -1.84
TCD1YHR003C TEX1P53851 422 aaKnown RBP3.53□□□□□ -1.84
TCD1YHR003C RIA1P53893 1110 aa3.53□□□□□ -1.84
TCD1YHR003C NHX1Q04121 633 aa3.53□□□□□ -1.84
TCD1YHR003C COG8Q04632 607 aa3.53□□□□□ -1.84
TCD1YHR003C IRC13Q08630 104 aa3.53□□□□□ -1.84
TCD1YHR003C YLR149CQ99296 730 aa3.53□□□□□ -1.84
TCD1YHR003C TRM732Q03496 1420 aa3.53□□□□□ -1.85
TCD1YHR003C MET6P05694 767 aaKnown RBP3.52□□□□□ -1.85
TCD1YHR003C SRD1P09007 221 aa3.52□□□□□ -1.85
TCD1YHR003C HOG1P32485 435 aa3.52□□□□□ -1.85
TCD1YHR003C APL2P36000 726 aaPredicted RBP3.52□□□□□ -1.85
TCD1YHR003C HSL7P38274 827 aa3.52□□□□□ -1.85
TCD1YHR003C MIP6P38760 659 aaKnown RBP3.52□□□□□ -1.85
TCD1YHR003C FMP52P40008 231 aa3.52□□□□□ -1.85
TCD1YHR003C GIS1Q03833 894 aa3.52□□□□□ -1.85
TCD1YHR003C IRC10Q08118 586 aa3.52□□□□□ -1.85
TCD1YHR003C NUP170P38181 1502 aa3.52□□□□□ -1.85
TCD1YHR003C TY2B-BQ12491 1770 aa3.52□□□□□ -1.85
TCD1YHR003C ADE2P21264 571 aaKnown RBP3.51□□□□□ -1.85
TCD1YHR003C HIS7P33734 552 aaKnown RBP3.51□□□□□ -1.85
TCD1YHR003C YEL1P34225 687 aa3.51□□□□□ -1.85
TCD1YHR003C MTH1P35198 433 aa3.51□□□□□ -1.85
TCD1YHR003C TRZ1P36159 838 aaPredicted RBP3.51□□□□□ -1.85
TCD1YHR003C APT2P36973 181 aa3.51□□□□□ -1.85
TCD1YHR003C ENP1P38333 483 aaKnown RBP3.51□□□□□ -1.85
TCD1YHR003C BCD1P38772 366 aa3.51□□□□□ -1.85
TCD1YHR003C SDS3P40505 327 aa3.51□□□□□ -1.85
TCD1YHR003C QRI1P43123 477 aaKnown RBP3.51□□□□□ -1.85
TCD1YHR003C UBC11P52492 156 aa3.51□□□□□ -1.85
TCD1YHR003C MDG1P53885 366 aa3.51□□□□□ -1.85
TCD1YHR003C ARG5,6Q01217 863 aa3.51□□□□□ -1.85
TCD1YHR003C CTK1Q03957 528 aaKnown RBP3.51□□□□□ -1.85
TCD1YHR003C UTP14Q04500 899 aaKnown RBP3.51□□□□□ -1.85
TCD1YHR003C RPN7Q06103 429 aaKnown RBP3.51□□□□□ -1.85
TCD1YHR003C MCM21Q06675 368 aa3.51□□□□□ -1.85
TCD1YHR003C SGO1Q08490 590 aa3.51□□□□□ -1.85
TCD1YHR003C Q0142Q9ZZW4 58 aa3.51□□□□□ -1.85
TCD1YHR003C MIH1P23748 554 aa3.5□□□□□ -1.85
TCD1YHR003C YKR018CP36114 725 aa3.5□□□□□ -1.85
TCD1YHR003C YKR051WP36142 418 aa3.5□□□□□ -1.85
TCD1YHR003C YHR112CP38716 378 aa3.5□□□□□ -1.85
TCD1YHR003C REV7P38927 245 aa3.5□□□□□ -1.85
TCD1YHR003C MNN1P39106 762 aa3.5□□□□□ -1.85
TCD1YHR003C UBP12P39538 1254 aa3.5□□□□□ -1.85
TCD1YHR003C YAP1802P53309 568 aa3.5□□□□□ -1.85
TCD1YHR003C GND2P53319 492 aa3.5□□□□□ -1.85
TCD1YHR003C NTG2Q08214 380 aa3.5□□□□□ -1.85
TCD1YHR003C YOL057WQ08225 711 aa3.5□□□□□ -1.85
TCD1YHR003C RAD18P10862 487 aa3.49□□□□□ -1.85
TCD1YHR003C PCL5P38794 229 aa3.49□□□□□ -1.85
TCD1YHR003C CCT3P39077 534 aaKnown RBP3.49□□□□□ -1.85
TCD1YHR003C DOT6P40059 670 aaKnown RBP3.49□□□□□ -1.85
TCD1YHR003C TEL2P53038 688 aa3.49□□□□□ -1.85
TCD1YHR003C PCL10P53124 433 aa3.49□□□□□ -1.85
TCD1YHR003C SSL2Q00578 843 aa3.49□□□□□ -1.85
TCD1YHR003C REC102Q02721 264 aa3.49□□□□□ -1.85
TCD1YHR003C YGR161W-CQ3E744 92 aa3.49□□□□□ -1.85
TCD1YHR003C MMS22Q06164 1454 aa3.48□□□□□ -1.85
TCD1YHR003C SIR3P06701 978 aa3.48□□□□□ -1.85
TCD1YHR003C PCL2P25693 308 aa3.48□□□□□ -1.85
TCD1YHR003C HIR1P32479 840 aa3.48□□□□□ -1.85
TCD1YHR003C MTL1P53214 551 aa3.48□□□□□ -1.85
TCD1YHR003C ATG33Q06485 197 aa3.48□□□□□ -1.85
TCD1YHR003C BRE1Q07457 700 aaKnown RBP3.48□□□□□ -1.85
TCD1YHR003C SPO14P36126 1683 aa3.48□□□□□ -1.85
TCD1YHR003C DNF3Q12674 1656 aa3.48□□□□□ -1.85
TCD1YHR003C ARO1P08566 1588 aaKnown RBP3.47□□□□□ -1.85
TCD1YHR003C CDC43P18898 376 aa3.47□□□□□ -1.85
TCD1YHR003C SFL1P20134 766 aa3.47□□□□□ -1.85
TCD1YHR003C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
TCD1YHR003C MRC1P25588 1096 aa3.47□□□□□ -1.85
TCD1YHR003C PWP2P25635 923 aaKnown RBP3.47□□□□□ -1.85
TCD1YHR003C CBR1P38626 284 aaKnown RBP3.47□□□□□ -1.85
TCD1YHR003C PCM1P38628 557 aaKnown RBP3.47□□□□□ -1.85
TCD1YHR003C NUP60P39705 539 aa3.47□□□□□ -1.85
TCD1YHR003C YJR142WP47173 342 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms