RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	GND2	P53319	492 aa		4.92	□□□□□ -1.62
VMA7	YGR020C	SSL2	Q00578	843 aa		4.92	□□□□□ -1.62
VMA7	YGR020C	THI73	Q07904	523 aa		4.92	□□□□□ -1.62
VMA7	YGR020C	YKL033W-A	Q86ZR7	236 aa		4.92	□□□□□ -1.62
VMA7	YGR020C	SIR3	P06701	978 aa		4.91	□□□□□ -1.62
VMA7	YGR020C	AKL1	P38080	1108 aa	Known RBP	4.91	□□□□□ -1.62
VMA7	YGR020C	MAL31	P38156	614 aa		4.91	□□□□□ -1.62
VMA7	YGR020C	CBR1	P38626	284 aa	Known RBP	4.91	□□□□□ -1.62
VMA7	YGR020C	SFB3	P38810	929 aa		4.91	□□□□□ -1.62
VMA7	YGR020C	CKB2	P38930	258 aa		4.91	□□□□□ -1.62
VMA7	YGR020C	GET2	P40056	285 aa		4.91	□□□□□ -1.62
VMA7	YGR020C	SDS3	P40505	327 aa		4.91	□□□□□ -1.62
VMA7	YGR020C	PAN2	P53010	1115 aa	Predicted RBP	4.91	□□□□□ -1.62
VMA7	YGR020C	YAP1802	P53309	568 aa		4.91	□□□□□ -1.62
VMA7	YGR020C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
VMA7	YGR020C	PRP19	P32523	503 aa	Known RBP	4.9	□□□□□ -1.63
VMA7	YGR020C	MTH1	P35198	433 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	SPC42	P36094	363 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	YKR075C	P36155	307 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	TYS1	P36421	394 aa	Known RBP	4.9	□□□□□ -1.63
VMA7	YGR020C	TDA3	P38758	523 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	YHR202W	P38887	602 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	YNL195C	P40168	261 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	RET2	P43621	546 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	STU2	P46675	888 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	NOP9	P47077	666 aa	Known RBP	4.9	□□□□□ -1.63
VMA7	YGR020C	BFA1	P47113	574 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	YJR096W	P47137	282 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	YNR029C	P53729	429 aa	Known RBP	4.9	□□□□□ -1.63
VMA7	YGR020C	ISA1	Q07821	250 aa	Predicted RBP	4.9	□□□□□ -1.63
VMA7	YGR020C	DIA2	Q08496	732 aa	Predicted RBP	4.9	□□□□□ -1.63
VMA7	YGR020C	ECM3	Q99252	613 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	AIM44	Q99299	758 aa		4.9	□□□□□ -1.63
VMA7	YGR020C	PEX1	P24004	1043 aa		4.89	□□□□□ -1.63
VMA7	YGR020C	BRN1	P38170	754 aa		4.89	□□□□□ -1.63
VMA7	YGR020C	CRP1	P38845	465 aa	Known RBP	4.89	□□□□□ -1.63
VMA7	YGR020C	NUG1	P40010	520 aa	Known RBP	4.89	□□□□□ -1.63
VMA7	YGR020C	PMT3	P47190	753 aa		4.89	□□□□□ -1.63
VMA7	YGR020C	IRC10	Q08118	586 aa		4.89	□□□□□ -1.63
VMA7	YGR020C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
VMA7	YGR020C	BEM4	P39011	633 aa		4.88	□□□□□ -1.63
VMA7	YGR020C	RSC8	P43609	557 aa	Known RBP	4.88	□□□□□ -1.63
VMA7	YGR020C	DOS2	P54858	310 aa		4.88	□□□□□ -1.63
VMA7	YGR020C	RGC1	Q06108	1083 aa	Known RBP	4.88	□□□□□ -1.63
VMA7	YGR020C	MRH1	Q12117	320 aa	Predicted RBP	4.88	□□□□□ -1.63
VMA7	YGR020C	ZRT2	Q12436	422 aa		4.88	□□□□□ -1.63
VMA7	YGR020C	NUP145	P49687	1317 aa		4.88	□□□□□ -1.63
VMA7	YGR020C	PHO11	P35842	467 aa		4.87	□□□□□ -1.63
VMA7	YGR020C	PHO12	P38693	467 aa		4.87	□□□□□ -1.63
VMA7	YGR020C	SMX3	P54999	86 aa	Predicted RBP	4.87	□□□□□ -1.63
VMA7	YGR020C	UME1	Q03010	460 aa		4.87	□□□□□ -1.63
VMA7	YGR020C	MTQ2	Q03920	221 aa	Predicted RBP	4.87	□□□□□ -1.63
VMA7	YGR020C	VHS3	Q08438	674 aa		4.87	□□□□□ -1.63
VMA7	YGR020C	TAD3	Q9URQ3	322 aa		4.87	□□□□□ -1.63
VMA7	YGR020C	CDC43	P18898	376 aa		4.86	□□□□□ -1.63
VMA7	YGR020C	IMG2	P25642	146 aa	Predicted RBP	4.86	□□□□□ -1.63
VMA7	YGR020C	QRI1	P43123	477 aa	Known RBP	4.86	□□□□□ -1.63
VMA7	YGR020C	YGR153W	P48238	217 aa		4.86	□□□□□ -1.63
VMA7	YGR020C	FHN1	P53279	174 aa		4.86	□□□□□ -1.63
VMA7	YGR020C	YMR210W	Q03649	449 aa		4.86	□□□□□ -1.63
VMA7	YGR020C	MLH3	Q12083	715 aa		4.86	□□□□□ -1.63
VMA7	YGR020C	CLF1	Q12309	687 aa	Predicted RBP	4.86	□□□□□ -1.63
VMA7	YGR020C	KIN3	P22209	435 aa		4.85	□□□□□ -1.63
VMA7	YGR020C	PET127	P32606	800 aa		4.85	□□□□□ -1.63
VMA7	YGR020C	BCS1	P32839	456 aa		4.85	□□□□□ -1.63
VMA7	YGR020C	PIG2	P40187	538 aa		4.85	□□□□□ -1.63
VMA7	YGR020C	CCT5	P40413	562 aa	Known RBP	4.85	□□□□□ -1.63
VMA7	YGR020C	NDC80	P40460	691 aa		4.85	□□□□□ -1.63
VMA7	YGR020C	YLR407W	Q06070	228 aa		4.85	□□□□□ -1.63
VMA7	YGR020C	THI22	Q06490	572 aa		4.85	□□□□□ -1.63
VMA7	YGR020C	ERG20	P08524	352 aa	Known RBP	4.84	□□□□□ -1.63
VMA7	YGR020C	FRS1	P15624	595 aa	Known RBP	4.84	□□□□□ -1.63
VMA7	YGR020C	YKU70	P32807	602 aa		4.84	□□□□□ -1.63
VMA7	YGR020C	BIT2	P38346	545 aa		4.84	□□□□□ -1.63
VMA7	YGR020C	GZF3	P42944	551 aa	Known RBP	4.84	□□□□□ -1.63
VMA7	YGR020C	YGR237C	P50089	785 aa		4.84	□□□□□ -1.63
VMA7	YGR020C	VPS36	Q06696	566 aa		4.84	□□□□□ -1.63
VMA7	YGR020C	YTM1	Q12024	460 aa	Predicted RBP	4.84	□□□□□ -1.63
VMA7	YGR020C	POM34	Q12445	299 aa		4.84	□□□□□ -1.63
VMA7	YGR020C	PRP28	P23394	588 aa		4.83	□□□□□ -1.64
VMA7	YGR020C	YJL206C	P39529	758 aa		4.83	□□□□□ -1.64
VMA7	YGR020C	ARG2	P40360	574 aa		4.83	□□□□□ -1.64
VMA7	YGR020C	CTR1	P49573	406 aa		4.83	□□□□□ -1.64
VMA7	YGR020C	GPG1	P53130	126 aa		4.83	□□□□□ -1.64
VMA7	YGR020C	ATG4	P53867	494 aa		4.83	□□□□□ -1.64
VMA7	YGR020C	GIS1	Q03833	894 aa		4.83	□□□□□ -1.64
VMA7	YGR020C	HFD1	Q04458	532 aa		4.83	□□□□□ -1.64
VMA7	YGR020C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
VMA7	YGR020C	SWI6	P09959	803 aa		4.82	□□□□□ -1.64
VMA7	YGR020C	THR1	P17423	357 aa	Known RBP	4.82	□□□□□ -1.64
VMA7	YGR020C	SEC15	P22224	910 aa		4.82	□□□□□ -1.64
VMA7	YGR020C	SEC6	P32844	805 aa		4.82	□□□□□ -1.64
VMA7	YGR020C	YPT7	P32939	208 aa		4.82	□□□□□ -1.64
VMA7	YGR020C	GLG1	P36143	616 aa		4.82	□□□□□ -1.64
VMA7	YGR020C	BIT61	P47041	543 aa		4.82	□□□□□ -1.64
VMA7	YGR020C	ECM9	Q02202	377 aa		4.82	□□□□□ -1.64
VMA7	YGR020C	VBA4	Q04602	768 aa	Known RBP	4.82	□□□□□ -1.64
VMA7	YGR020C	FAP7	Q12055	197 aa	Predicted RBP	4.82	□□□□□ -1.64
VMA7	YGR020C	USV1	Q12132	391 aa		4.82	□□□□□ -1.64
VMA7	YGR020C	RPS21B	Q3E754	87 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms