RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C TOM1Q03280 3268 aa13.6□□□□□ -0.23
PHO4YFR034C EST1P17214 699 aaPredicted RBP13.6□□□□□ -0.23
PHO4YFR034C SFL1P20134 766 aa13.6□□□□□ -0.23
PHO4YFR034C SPT5P27692 1063 aaKnown RBP13.6□□□□□ -0.23
PHO4YFR034C MSG5P38590 489 aa13.6□□□□□ -0.23
PHO4YFR034C TMN3P40071 706 aa13.6□□□□□ -0.23
PHO4YFR034C HOP2P53187 214 aa13.6□□□□□ -0.23
PHO4YFR034C NOG2P53742 486 aaKnown RBP13.6□□□□□ -0.23
PHO4YFR034C GPD1Q00055 391 aaKnown RBP13.6□□□□□ -0.23
PHO4YFR034C DOT1Q04089 582 aaKnown RBP13.6□□□□□ -0.23
PHO4YFR034C RTP1Q12751 981 aa13.6□□□□□ -0.23
PHO4YFR034C KAR3P17119 729 aa13.59□□□□□ -0.23
PHO4YFR034C ADE2P21264 571 aaKnown RBP13.59□□□□□ -0.23
PHO4YFR034C PLC1P32383 869 aa13.59□□□□□ -0.23
PHO4YFR034C EFB1P32471 206 aaKnown RBP13.59□□□□□ -0.23
PHO4YFR034C RPT1P33299 467 aaKnown RBP13.59□□□□□ -0.23
PHO4YFR034C APM2P38700 605 aa13.59□□□□□ -0.23
PHO4YFR034C YJR107WP47145 328 aa13.59□□□□□ -0.23
PHO4YFR034C ALT1P52893 592 aa13.59□□□□□ -0.23
PHO4YFR034C ALG11P53954 548 aaKnown RBP13.59□□□□□ -0.23
PHO4YFR034C YOR059CQ08448 450 aaKnown RBP13.59□□□□□ -0.23
PHO4YFR034C ADE4P04046 510 aaKnown RBP13.58□□□□□ -0.24
PHO4YFR034C ARG4P04076 463 aaPredicted RBP13.58□□□□□ -0.24
PHO4YFR034C PBP2P38151 413 aaKnown RBP RIP-Chip data13.58□□□□□ -0.24not detected
PHO4YFR034C LAM5P43560 674 aa13.58□□□□□ -0.24
PHO4YFR034C ATG36P46983 293 aa13.58□□□□□ -0.24
PHO4YFR034C PRY3P47033 881 aa13.58□□□□□ -0.24
PHO4YFR034C ISM1P48526 1002 aa13.58□□□□□ -0.24
PHO4YFR034C INP52P50942 1183 aa13.58□□□□□ -0.24
PHO4YFR034C YGL036WP53185 909 aaPredicted RBP13.58□□□□□ -0.24
PHO4YFR034C YPR027CQ12079 277 aa13.58□□□□□ -0.24
PHO4YFR034C PUS1Q12211 544 aaKnown RBP13.58□□□□□ -0.24
PHO4YFR034C SPO16P17122 198 aa13.57□□□□□ -0.24
PHO4YFR034C PUF4P25339 888 aaKnown RBP RIP-Chip data13.57□□□□□ -0.24not detected
PHO4YFR034C YMC2P38087 329 aa13.57□□□□□ -0.24
PHO4YFR034C VHC1P38329 1120 aa13.57□□□□□ -0.24
PHO4YFR034C PCA1P38360 1216 aa13.57□□□□□ -0.24
PHO4YFR034C INA22P40576 216 aa13.57□□□□□ -0.24
PHO4YFR034C SAP185P40856 1058 aa13.57□□□□□ -0.24
PHO4YFR034C SXM1Q04175 944 aaKnown RBP13.57□□□□□ -0.24
PHO4YFR034C TUB3P09734 445 aaKnown RBP13.56□□□□□ -0.24
PHO4YFR034C PDR1P12383 1068 aa13.56□□□□□ -0.24
PHO4YFR034C MRP4P32902 394 aa13.56□□□□□ -0.24
PHO4YFR034C DUR3P33413 735 aa13.56□□□□□ -0.24
PHO4YFR034C QNS1P38795 714 aaKnown RBP13.56□□□□□ -0.24
PHO4YFR034C CCT2P39076 527 aaKnown RBP13.56□□□□□ -0.24
PHO4YFR034C YER186CP40101 306 aa13.56□□□□□ -0.24
PHO4YFR034C YMR134WP40207 237 aa13.56□□□□□ -0.24
PHO4YFR034C SNZ3P43545 298 aa13.56□□□□□ -0.24
PHO4YFR034C YML6P51998 286 aa13.56□□□□□ -0.24
PHO4YFR034C MND1P53102 219 aa13.56□□□□□ -0.24
PHO4YFR034C SNZ2P53824 298 aa13.56□□□□□ -0.24
PHO4YFR034C SNU56Q03782 492 aaKnown RBP13.56□□□□□ -0.24
PHO4YFR034C PNP1Q05788 311 aa13.56□□□□□ -0.24
PHO4YFR034C ACM1Q08981 209 aa13.56□□□□□ -0.24
PHO4YFR034C SUT2Q12286 268 aa13.56□□□□□ -0.24
PHO4YFR034C ADH4P10127 382 aa13.55□□□□□ -0.24
PHO4YFR034C PEP5P12868 1029 aa13.55□□□□□ -0.24
PHO4YFR034C NOP4P37838 685 aaKnown RBP13.55□□□□□ -0.24
PHO4YFR034C PCM1P38628 557 aaKnown RBP13.55□□□□□ -0.24
PHO4YFR034C PSF2P40359 213 aa13.55□□□□□ -0.24
PHO4YFR034C PXA1P41909 870 aa13.55□□□□□ -0.24
PHO4YFR034C YJR054WP47114 497 aa13.55□□□□□ -0.24
PHO4YFR034C VPS72Q03388 795 aa13.55□□□□□ -0.24
PHO4YFR034C CDD1Q06549 142 aa13.55□□□□□ -0.24
PHO4YFR034C SEY1Q99287 776 aa13.55□□□□□ -0.24
PHO4YFR034C JIP3O13555 125 aa13.54□□□□□ -0.24
PHO4YFR034C RAD10P06838 210 aa13.54□□□□□ -0.24
PHO4YFR034C CHS1P08004 1131 aa13.54□□□□□ -0.24
PHO4YFR034C PYC1P11154 1178 aaKnown RBP13.54□□□□□ -0.24
PHO4YFR034C VBA3P25594 458 aa13.54□□□□□ -0.24
PHO4YFR034C GPI10P30777 616 aa13.54□□□□□ -0.24
PHO4YFR034C RPC37P36121 282 aa13.54□□□□□ -0.24
PHO4YFR034C VBA5P36172 582 aa13.54□□□□□ -0.24
PHO4YFR034C CCL1P37366 393 aa13.54□□□□□ -0.24
PHO4YFR034C YAP1801P38856 637 aa13.54□□□□□ -0.24
PHO4YFR034C CPR6P53691 371 aaKnown RBP13.54□□□□□ -0.24
PHO4YFR034C MUK1Q02866 612 aa13.54□□□□□ -0.24
PHO4YFR034C MZM1Q03429 123 aaPredicted RBP13.54□□□□□ -0.24
PHO4YFR034C FRA1Q07825 749 aa13.54□□□□□ -0.24
PHO4YFR034C YOR131CQ12486 218 aa13.54□□□□□ -0.24
PHO4YFR034C SRF1Q12516 437 aa13.54□□□□□ -0.24
PHO4YFR034C QCR6P00127 147 aa13.53□□□□□ -0.24
PHO4YFR034C SAT4P25333 603 aaKnown RBP13.53□□□□□ -0.24
PHO4YFR034C SEC1P30619 724 aaKnown RBP13.53□□□□□ -0.24
PHO4YFR034C YME1P32795 747 aa13.53□□□□□ -0.24
PHO4YFR034C GEM1P39722 662 aa13.53□□□□□ -0.24
PHO4YFR034C SMX2P40204 77 aaKnown RBP13.53□□□□□ -0.24
PHO4YFR034C ARO80Q04052 950 aa13.53□□□□□ -0.24
PHO4YFR034C PCD1Q12524 340 aa13.53□□□□□ -0.24
PHO4YFR034C CTF3Q12748 733 aa13.53□□□□□ -0.24
PHO4YFR034C YML002WP0CF17 737 aa13.52□□□□□ -0.25
PHO4YFR034C AEP2P22136 580 aa13.52□□□□□ -0.25
PHO4YFR034C TRX1P22217 103 aaKnown RBP13.52□□□□□ -0.25
PHO4YFR034C BUD2P33314 1104 aa13.52□□□□□ -0.25
PHO4YFR034C TBS1P38114 1094 aa13.52□□□□□ -0.25
PHO4YFR034C YBL036CP38197 257 aa13.52□□□□□ -0.25
PHO4YFR034C POP4P38336 279 aa13.52□□□□□ -0.25
PHO4YFR034C AFG3P39925 761 aa13.52□□□□□ -0.25
PHO4YFR034C KHA1P40309 873 aa13.52□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms