RNA–Protein interactions for RNA: YDR496C

PUF6, Transcript of Pumilio-homology domain protein, yeastyeast

Gene PUF6, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUF6YDR496C RRB1Q04225 511 aaKnown RBP3.2□□□□□ -1.9
PUF6YDR496C SGD1Q06132 899 aa3.2□□□□□ -1.9
PUF6YDR496C ATG13Q06628 738 aa3.2□□□□□ -1.9
PUF6YDR496C YDL073WQ07454 984 aa3.2□□□□□ -1.9
PUF6YDR496C RRP6Q12149 733 aaKnown RBP3.2□□□□□ -1.9
PUF6YDR496C APC2Q12440 853 aa3.2□□□□□ -1.9
PUF6YDR496C YMR084WA2P2R3 262 aa3.19□□□□□ -1.9
PUF6YDR496C GAL1P04385 528 aa3.19□□□□□ -1.9
PUF6YDR496C SRO9P25567 434 aaKnown RBP3.19□□□□□ -1.9
PUF6YDR496C POL4P25615 582 aa3.19□□□□□ -1.9
PUF6YDR496C KIP1P28742 1111 aa3.19□□□□□ -1.9
PUF6YDR496C MRE11P32829 692 aa3.19□□□□□ -1.9
PUF6YDR496C YKL107WP34251 309 aa3.19□□□□□ -1.9
PUF6YDR496C YBR071WP38243 211 aa3.19□□□□□ -1.9
PUF6YDR496C PEX18P38855 283 aa3.19□□□□□ -1.9
PUF6YDR496C GPB2P39717 880 aa3.19□□□□□ -1.9
PUF6YDR496C SIP5P40210 489 aaKnown RBP3.19□□□□□ -1.9
PUF6YDR496C YML6P51998 286 aa3.19□□□□□ -1.9
PUF6YDR496C TAN1P53072 289 aaPredicted RBP3.19□□□□□ -1.9
PUF6YDR496C SPO1P53541 631 aa3.19□□□□□ -1.9
PUF6YDR496C HST1P53685 503 aa3.19□□□□□ -1.9
PUF6YDR496C ALF1P53904 254 aa3.19□□□□□ -1.9
PUF6YDR496C REX2P54964 269 aaKnown RBP3.19□□□□□ -1.9
PUF6YDR496C MET14Q02196 202 aa3.19□□□□□ -1.9
PUF6YDR496C GAD1Q04792 585 aa3.19□□□□□ -1.9
PUF6YDR496C SMD2Q06217 110 aaKnown RBP3.19□□□□□ -1.9
PUF6YDR496C RSC58Q07979 502 aa3.19□□□□□ -1.9
PUF6YDR496C FMP25Q08023 583 aa3.19□□□□□ -1.9
PUF6YDR496C NTG2Q08214 380 aa3.19□□□□□ -1.9
PUF6YDR496C SSP2Q08646 371 aa3.19□□□□□ -1.9
PUF6YDR496C BMS1Q08965 1183 aaKnown RBP3.19□□□□□ -1.9
PUF6YDR496C FLC1Q08967 793 aa3.19□□□□□ -1.9
PUF6YDR496C YDR056CQ12025 205 aa3.19□□□□□ -1.9
PUF6YDR496C GLE1Q12315 538 aa3.19□□□□□ -1.9
PUF6YDR496C RRP36Q12481 300 aaPredicted RBP3.19□□□□□ -1.9
PUF6YDR496C NUP145P49687 1317 aa3.19□□□□□ -1.9
PUF6YDR496C SPO14P36126 1683 aa3.18□□□□□ -1.9
PUF6YDR496C RPB2P08518 1224 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C ERR1P0CX10 437 aa3.18□□□□□ -1.9
PUF6YDR496C ERR2P0CX11 437 aa3.18□□□□□ -1.9
PUF6YDR496C YER152CP10356 443 aa3.18□□□□□ -1.9
PUF6YDR496C FUR1P18562 216 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C TRX1P22217 103 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C RNQ1P25367 405 aa3.18□□□□□ -1.9
PUF6YDR496C RPL8BP29453 256 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C PTP2P29461 750 aa3.18□□□□□ -1.9
PUF6YDR496C DPH2P32461 534 aa3.18□□□□□ -1.9
PUF6YDR496C MRP8P35719 219 aa3.18□□□□□ -1.9
PUF6YDR496C HSM3P38348 480 aa3.18□□□□□ -1.9
PUF6YDR496C SRP72P38688 640 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C BCD1P38772 366 aa3.18□□□□□ -1.9
PUF6YDR496C LRP1P38801 184 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C SPC72P39723 622 aa3.18□□□□□ -1.9
PUF6YDR496C PCL7P40186 285 aa3.18□□□□□ -1.9
PUF6YDR496C HNT2P49775 206 aa3.18□□□□□ -1.9
PUF6YDR496C HOP2P53187 214 aa3.18□□□□□ -1.9
PUF6YDR496C SDA1P53313 767 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C PAP2P53632 584 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C YNL034WP53963 612 aa3.18□□□□□ -1.9
PUF6YDR496C YNL018CP53976 612 aa3.18□□□□□ -1.9
PUF6YDR496C SNZ1Q03148 297 aa3.18□□□□□ -1.9
PUF6YDR496C ADY3Q07732 790 aa3.18□□□□□ -1.9
PUF6YDR496C VMA2P16140 517 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C SPO16P17122 198 aa3.18□□□□□ -1.9
PUF6YDR496C GAS1P22146 559 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C NTG1P31378 399 aa3.18□□□□□ -1.9
PUF6YDR496C DEP1P31385 405 aa3.18□□□□□ -1.9
PUF6YDR496C DBF20P32328 564 aa3.18□□□□□ -1.9
PUF6YDR496C YSC84P32793 468 aa3.18□□□□□ -1.9
PUF6YDR496C RIB7P33312 244 aa3.18□□□□□ -1.9
PUF6YDR496C CNS1P33313 385 aa3.18□□□□□ -1.9
PUF6YDR496C PIN4P34217 668 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
PUF6YDR496C YKL133CP36066 463 aa3.18□□□□□ -1.9
PUF6YDR496C SPT8P38915 602 aa3.18□□□□□ -1.9
PUF6YDR496C RSP5P39940 809 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C UTP18P40362 594 aaPredicted RBP3.18□□□□□ -1.9
PUF6YDR496C PXA1P41909 870 aa3.18□□□□□ -1.9
PUF6YDR496C RET2P43621 546 aa3.18□□□□□ -1.9
PUF6YDR496C DSL1P53847 754 aa3.18□□□□□ -1.9
PUF6YDR496C CSR1Q06705 408 aaKnown RBP3.18□□□□□ -1.9
PUF6YDR496C OPY2Q06810 360 aa3.18□□□□□ -1.9
PUF6YDR496C SDH5Q08230 162 aa3.18□□□□□ -1.9
PUF6YDR496C FAP7Q12055 197 aaPredicted RBP3.18□□□□□ -1.9
PUF6YDR496C GNT1Q12096 491 aa3.18□□□□□ -1.9
PUF6YDR496C SCM3Q12334 223 aa3.18□□□□□ -1.9
PUF6YDR496C SPO21Q12411 609 aa3.18□□□□□ -1.9
PUF6YDR496C SMC6Q12749 1114 aa3.18□□□□□ -1.9
PUF6YDR496C SNT2P53127 1403 aa3.17□□□□□ -1.9
PUF6YDR496C ULS1Q08562 1619 aa3.17□□□□□ -1.9
PUF6YDR496C HMG1P12683 1054 aa3.17□□□□□ -1.9
PUF6YDR496C MRP7P12687 371 aa3.17□□□□□ -1.9
PUF6YDR496C PMS1P14242 873 aa3.17□□□□□ -1.9
PUF6YDR496C REC107P21651 314 aa3.17□□□□□ -1.9
PUF6YDR496C DBP2P24783 546 aaKnown RBP3.17□□□□□ -1.9
PUF6YDR496C EFB1P32471 206 aaKnown RBP3.17□□□□□ -1.9
PUF6YDR496C TSA1P34760 196 aaKnown RBP3.17□□□□□ -1.9
PUF6YDR496C PBY1P38254 753 aa3.17□□□□□ -1.9
PUF6YDR496C GGA2P38817 585 aaKnown RBP3.17□□□□□ -1.9
PUF6YDR496C YHR131CP38835 850 aa3.17□□□□□ -1.9
PUF6YDR496C FMP10P40098 244 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 193.2 ms