RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W SSL2Q00578 843 aa3.61□□□□□ -1.83
SSF2YDR312W COG8Q04632 607 aa3.61□□□□□ -1.83
SSF2YDR312W GIN4Q12263 1142 aa3.61□□□□□ -1.83
SSF2YDR312W AIM44Q99299 758 aa3.61□□□□□ -1.83
SSF2YDR312W CDC43P18898 376 aa3.6□□□□□ -1.83
SSF2YDR312W CCR4P31384 837 aaKnown RBP3.6□□□□□ -1.83
SSF2YDR312W APL2P36000 726 aaPredicted RBP3.6□□□□□ -1.83
SSF2YDR312W YKR018CP36114 725 aa3.6□□□□□ -1.83
SSF2YDR312W MIP6P38760 659 aaKnown RBP3.6□□□□□ -1.83
SSF2YDR312W DOT6P40059 670 aaKnown RBP3.6□□□□□ -1.83
SSF2YDR312W YAP1802P53309 568 aa3.6□□□□□ -1.83
SSF2YDR312W SDA1P53313 767 aaKnown RBP3.6□□□□□ -1.83
SSF2YDR312W DOS2P54858 310 aa3.6□□□□□ -1.83
SSF2YDR312W ARP4P80428 489 aa3.6□□□□□ -1.83
SSF2YDR312W ARG5,6Q01217 863 aa3.6□□□□□ -1.83
SSF2YDR312W YGR161W-CQ3E744 92 aa3.6□□□□□ -1.83
SSF2YDR312W MYO2P19524 1574 aaKnown RBP3.6□□□□□ -1.83
SSF2YDR312W SIR3P06701 978 aa3.59□□□□□ -1.83
SSF2YDR312W GFA1P14742 717 aaKnown RBP3.59□□□□□ -1.83
SSF2YDR312W KIN3P22209 435 aa3.59□□□□□ -1.83
SSF2YDR312W TRZ1P36159 838 aaPredicted RBP3.59□□□□□ -1.83
SSF2YDR312W TDP1P38319 544 aa3.59□□□□□ -1.83
SSF2YDR312W CBR1P38626 284 aaKnown RBP3.59□□□□□ -1.83
SSF2YDR312W YHR112CP38716 378 aa3.59□□□□□ -1.83
SSF2YDR312W REV7P38927 245 aa3.59□□□□□ -1.83
SSF2YDR312W CCT3P39077 534 aaKnown RBP3.59□□□□□ -1.83
SSF2YDR312W HLJ1P48353 224 aa3.59□□□□□ -1.83
SSF2YDR312W PCL10P53124 433 aa3.59□□□□□ -1.83
SSF2YDR312W VPS73P53142 486 aaKnown RBP3.59□□□□□ -1.83
SSF2YDR312W MTL1P53214 551 aa3.59□□□□□ -1.83
SSF2YDR312W CTK1Q03957 528 aaKnown RBP3.59□□□□□ -1.83
SSF2YDR312W SUT2Q12286 268 aa3.59□□□□□ -1.83
SSF2YDR312W CDC25P04821 1589 aa3.59□□□□□ -1.84
SSF2YDR312W MNN4P36044 1178 aa3.58□□□□□ -1.84
SSF2YDR312W CUE2P36075 443 aaKnown RBP3.58□□□□□ -1.84
SSF2YDR312W LYS9P38999 446 aa3.58□□□□□ -1.84
SSF2YDR312W TAH11P47112 604 aa3.58□□□□□ -1.84
SSF2YDR312W YNR029CP53729 429 aaKnown RBP3.58□□□□□ -1.84
SSF2YDR312W SMX3P54999 86 aaPredicted RBP3.58□□□□□ -1.84
SSF2YDR312W LEE1Q02799 301 aaKnown RBP3.58□□□□□ -1.84
SSF2YDR312W MCM21Q06675 368 aa3.58□□□□□ -1.84
SSF2YDR312W GUD1Q07729 489 aa3.58□□□□□ -1.84
SSF2YDR312W THI73Q07904 523 aa3.58□□□□□ -1.84
SSF2YDR312W YKL033W-AQ86ZR7 236 aa3.58□□□□□ -1.84
SSF2YDR312W HCA4P20448 770 aaKnown RBP3.57□□□□□ -1.84
SSF2YDR312W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SSF2YDR312W APT2P36973 181 aa3.57□□□□□ -1.84
SSF2YDR312W CRP1P38845 465 aaKnown RBP3.57□□□□□ -1.84
SSF2YDR312W FMO1P38866 432 aa3.57□□□□□ -1.84
SSF2YDR312W PAN2P53010 1115 aaPredicted RBP3.57□□□□□ -1.84
SSF2YDR312W PYC1P11154 1178 aaKnown RBP3.56□□□□□ -1.84
SSF2YDR312W ERG6P25087 383 aaKnown RBP3.56□□□□□ -1.84
SSF2YDR312W MVD1P32377 396 aaKnown RBP3.56□□□□□ -1.84
SSF2YDR312W TYS1P36421 394 aaKnown RBP3.56□□□□□ -1.84
SSF2YDR312W SFB3P38810 929 aa3.56□□□□□ -1.84
SSF2YDR312W NUP60P39705 539 aa3.56□□□□□ -1.84
SSF2YDR312W YJR096WP47137 282 aa3.56□□□□□ -1.84
SSF2YDR312W BRE5P53741 515 aaKnown RBP3.56□□□□□ -1.84
SSF2YDR312W DCS2Q12123 353 aa3.56□□□□□ -1.84
SSF2YDR312W TAF3Q12297 353 aa3.56□□□□□ -1.84
SSF2YDR312W HRP1Q99383 534 aaKnown RBP3.56□□□□□ -1.84
SSF2YDR312W UFD4P33202 1483 aa3.56□□□□□ -1.84
SSF2YDR312W DNF1P32660 1571 aa3.56□□□□□ -1.84
SSF2YDR312W DMC1P25453 334 aa3.55□□□□□ -1.84
SSF2YDR312W SSZ1P38788 538 aaKnown RBP3.55□□□□□ -1.84
SSF2YDR312W CKB2P38930 258 aa3.55□□□□□ -1.84
SSF2YDR312W YJL206CP39529 758 aa3.55□□□□□ -1.84
SSF2YDR312W NDC80P40460 691 aa3.55□□□□□ -1.84
SSF2YDR312W REC102Q02721 264 aa3.55□□□□□ -1.84
SSF2YDR312W LGE1Q02796 332 aaKnown RBP3.55□□□□□ -1.84
SSF2YDR312W HMO1Q03973 246 aaKnown RBP3.55□□□□□ -1.84
SSF2YDR312W GEA2P39993 1459 aaKnown RBP3.55□□□□□ -1.84
SSF2YDR312W SSK2P53599 1579 aa3.55□□□□□ -1.84
SSF2YDR312W RPO31P04051 1460 aa3.54□□□□□ -1.84
SSF2YDR312W CHD1P32657 1468 aa3.54□□□□□ -1.84
SSF2YDR312W PRP19P32523 503 aaKnown RBP3.54□□□□□ -1.84
SSF2YDR312W PPZ2P33329 710 aa3.54□□□□□ -1.84
SSF2YDR312W HRB1P38922 454 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SSF2YDR312W GID8P40208 455 aa3.54□□□□□ -1.84
SSF2YDR312W YIL166CP40445 542 aa3.54□□□□□ -1.84
SSF2YDR312W CCT7P42943 550 aaKnown RBP3.54□□□□□ -1.84
SSF2YDR312W YJR039WP47107 1121 aa3.54□□□□□ -1.84
SSF2YDR312W GPG1P53130 126 aa3.54□□□□□ -1.84
SSF2YDR312W FHN1P53279 174 aa3.54□□□□□ -1.84
SSF2YDR312W UME1Q03010 460 aa3.54□□□□□ -1.84
SSF2YDR312W MTQ2Q03920 221 aaPredicted RBP3.54□□□□□ -1.84
SSF2YDR312W NDJ1Q12366 352 aa3.54□□□□□ -1.84
SSF2YDR312W RPA190P10964 1664 aaKnown RBP3.54□□□□□ -1.84
SSF2YDR312W BNR1P40450 1375 aa3.53□□□□□ -1.84
SSF2YDR312W NUP145P49687 1317 aa3.53□□□□□ -1.84
SSF2YDR312W RNR1P21524 888 aaKnown RBP3.53□□□□□ -1.84
SSF2YDR312W PHO11P35842 467 aa3.53□□□□□ -1.84
SSF2YDR312W AKL1P38080 1108 aaKnown RBP3.53□□□□□ -1.84
SSF2YDR312W PHO12P38693 467 aa3.53□□□□□ -1.84
SSF2YDR312W GET2P40056 285 aa3.53□□□□□ -1.84
SSF2YDR312W ARG2P40360 574 aa3.53□□□□□ -1.84
SSF2YDR312W SET2P46995 733 aaKnown RBP3.53□□□□□ -1.84
SSF2YDR312W PMT3P47190 753 aa3.53□□□□□ -1.84
SSF2YDR312W ATG4P53867 494 aa3.53□□□□□ -1.84
SSF2YDR312W RGC1Q06108 1083 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms