RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	CNS1	P33313	385 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	YEL1	P34225	687 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	KEL1	P38853	1164 aa	Known RBP	5.09	□□□□□ -1.59
RVB1	YDR190C	RSM26	P47141	266 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	TOF1	P53840	1238 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	TRM44	Q02648	567 aa	Known RBP	5.09	□□□□□ -1.59
RVB1	YDR190C	NOG1	Q02892	647 aa	Known RBP	5.09	□□□□□ -1.59
RVB1	YDR190C	YMR102C	Q03177	834 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	URH1	Q04179	340 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	YPR078C	Q06813	372 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	NOP6	Q07623	225 aa	Known RBP	5.09	□□□□□ -1.59
RVB1	YDR190C	TCO89	Q08921	799 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	NUR1	Q12066	484 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	DAS2	Q12084	232 aa		5.09	□□□□□ -1.59
RVB1	YDR190C	FAL1	Q12099	399 aa	Known RBP	5.09	□□□□□ -1.59
RVB1	YDR190C	RUD3	Q12234	484 aa	Known RBP	5.09	□□□□□ -1.59
RVB1	YDR190C	CMR1	Q12510	522 aa	Known RBP	5.09	□□□□□ -1.59
RVB1	YDR190C	FUS1	P11710	512 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	NPR1	P22211	790 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	SRO9	P25567	434 aa	Known RBP	5.08	□□□□□ -1.6
RVB1	YDR190C	UBP11	P36026	717 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	LAS1	P36146	502 aa	Predicted RBP	5.08	□□□□□ -1.6
RVB1	YDR190C	PGM2	P37012	569 aa	Known RBP	5.08	□□□□□ -1.6
RVB1	YDR190C	OSH7	P38755	437 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	PEX28	P38848	579 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	TAT2	P38967	592 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
RVB1	YDR190C	NUP82	P40368	713 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	ATG36	P46983	293 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	PPT1	P53043	513 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	RIP-Chip
RVB1	YDR190C	MFM1	Q02783	413 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	HEH2	Q03281	663 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	GIR2	Q03768	265 aa	Predicted RBP	5.08	□□□□□ -1.6
RVB1	YDR190C	POB3	Q04636	552 aa	Known RBP	5.08	□□□□□ -1.6
RVB1	YDR190C	TDA5	Q06417	326 aa	Known RBP	5.08	□□□□□ -1.6
RVB1	YDR190C	OMS1	Q06668	471 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	MRL1	Q06815	381 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	MLH2	Q07980	695 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	YPL277C	Q08989	487 aa		5.08	□□□□□ -1.6
RVB1	YDR190C	CDC8	P00572	216 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
RVB1	YDR190C	IDI1	P15496	288 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	RRP14	P36080	434 aa	Known RBP	5.07	□□□□□ -1.6
RVB1	YDR190C	SHU2	P38957	223 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	PES4	P39684	611 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	SPF1	P39986	1215 aa	Known RBP	5.07	□□□□□ -1.6
RVB1	YDR190C	ROG3	P43602	733 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	YJR079W	P47126	109 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	YGL039W	P53183	348 aa	Known RBP	5.07	□□□□□ -1.6
RVB1	YDR190C	BTN2	P53286	410 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	NAN1	Q02931	896 aa	Known RBP	5.07	□□□□□ -1.6
RVB1	YDR190C	VTI1	Q04338	217 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	FUS2	Q05670	677 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	SDH5	Q08230	162 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	MED1	Q12321	566 aa		5.07	□□□□□ -1.6
RVB1	YDR190C	FKS1	P38631	1876 aa	Known RBP	5.06	□□□□□ -1.6
RVB1	YDR190C	TRP2	P00899	507 aa	Known RBP	5.06	□□□□□ -1.6
RVB1	YDR190C	CLN3	P13365	580 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	PRI2	P20457	528 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	MSM1	P22438	575 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	NAM7	P30771	971 aa	Known RBP	5.06	□□□□□ -1.6
RVB1	YDR190C	GCG1	P32656	232 aa	Known RBP	5.06	□□□□□ -1.6
RVB1	YDR190C	NFU1	P32860	256 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	SHC1	P39000	512 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	GNP1	P48813	663 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	CTR1	P49573	406 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	KAP114	P53067	1004 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	ARK1	P53974	638 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	VTC3	Q02725	835 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	CRF1	Q04930	467 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	ECI1	Q05871	280 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	YLR297W	Q05899	129 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	STE23	Q06010	1027 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	OPT2	Q06593	877 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	GLO4	Q12320	285 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	ZRT2	Q12436	422 aa		5.06	□□□□□ -1.6
RVB1	YDR190C	ARG4	P04076	463 aa	Predicted RBP	5.05	□□□□□ -1.6
RVB1	YDR190C	CBP1	P07252	654 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	HPR1	P17629	752 aa	Known RBP	5.05	□□□□□ -1.6
RVB1	YDR190C	YKL050C	P35736	922 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	GLY1	P37303	387 aa	Known RBP	5.05	□□□□□ -1.6
RVB1	YDR190C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
RVB1	YDR190C	TIF4631	P39935	952 aa	Known RBP	5.05	□□□□□ -1.6
RVB1	YDR190C	RPN3	P40016	523 aa	Known RBP	5.05	□□□□□ -1.6
RVB1	YDR190C	INP51	P40559	946 aa	Known RBP	5.05	□□□□□ -1.6
RVB1	YDR190C	LCB2	P40970	561 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	YNL320W	P42840	284 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	HUL5	P53119	910 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	ALG12	P53730	551 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	PEX13	P80667	386 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	RNT1	Q02555	471 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	EEB1	Q02891	456 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	TMA64	Q04600	565 aa	Known RBP	5.05	□□□□□ -1.6
RVB1	YDR190C	YDR278C	Q05612	105 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	WHI4	Q07655	649 aa	Known RBP	5.05	□□□□□ -1.6
RVB1	YDR190C	APL5	Q08951	932 aa	Known RBP	5.05	□□□□□ -1.6
RVB1	YDR190C	RKM4	Q12504	494 aa		5.05	□□□□□ -1.6
RVB1	YDR190C	SRD1	P09007	221 aa		5.04	□□□□□ -1.6
RVB1	YDR190C	SWI6	P09959	803 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms