RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HPR1	YDR138W	YLR464W	P0CX17	216 aa		4.71	□□□□□ -1.66
HPR1	YDR138W	HOM3	P10869	527 aa		4.71	□□□□□ -1.66
HPR1	YDR138W	YCL049C	P25577	312 aa		4.71	□□□□□ -1.66
HPR1	YDR138W	YEL076C	P39971	216 aa		4.71	□□□□□ -1.66
HPR1	YDR138W	SRP101	P32916	621 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	TGL1	P34163	548 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	CCZ1	P38273	704 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	YHL012W	P38709	493 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	MNT2	P53059	558 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	YDR444W	Q04093	687 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	SGD1	Q06132	899 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	VIP1	Q06685	1146 aa	Known RBP	4.7	□□□□□ -1.66
HPR1	YDR138W	COQ4	O13525	335 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	RPS17A	P02407	136 aa	Known RBP	4.7	□□□□□ -1.66
HPR1	YDR138W	RPS17B	P14127	136 aa	Known RBP	4.7	□□□□□ -1.66
HPR1	YDR138W	RER1	P25560	188 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	RPC82	P32349	654 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	MTC7	P32633	139 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	SRB7	P47822	140 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	YNR071C	P53757	342 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	TIM10	P87108	93 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	YKU80	Q04437	629 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	VID22	Q05934	901 aa		4.7	□□□□□ -1.66
HPR1	YDR138W	PAH1	P32567	862 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	YPT7	P32939	208 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	DHR2	P36009	735 aa	Predicted RBP	4.69	□□□□□ -1.66
HPR1	YDR138W	PEX7	P39108	375 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	YIL108W	P40483	696 aa	Known RBP	4.69	□□□□□ -1.66
HPR1	YDR138W	JJJ3	P47138	172 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	MSC2	Q03455	724 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	SSM4	P40318	1319 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	MCM3	P24279	971 aa	Known RBP	4.69	□□□□□ -1.66
HPR1	YDR138W	SWI4	P25302	1093 aa	Known RBP	4.69	□□□□□ -1.66
HPR1	YDR138W	SRO9	P25567	434 aa	Known RBP	4.69	□□□□□ -1.66
HPR1	YDR138W	POA1	P38218	177 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	BCD1	P38772	366 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	RSC1	P53236	928 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	YDL176W	Q12027	708 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	DBP10	Q12389	995 aa	Known RBP	4.69	□□□□□ -1.66
HPR1	YDR138W	DPH6	Q12429	685 aa		4.69	□□□□□ -1.66
HPR1	YDR138W	RPS9A	O13516	197 aa	Known RBP	4.68	□□□□□ -1.66
HPR1	YDR138W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
HPR1	YDR138W	PRP4	P20053	465 aa	Known RBP	4.68	□□□□□ -1.66
HPR1	YDR138W	CBP3	P21560	335 aa		4.68	□□□□□ -1.66
HPR1	YDR138W	NOP16	P40007	231 aa	Known RBP	4.68	□□□□□ -1.66
HPR1	YDR138W	TPA1	P40032	644 aa	Known RBP	4.68	□□□□□ -1.66
HPR1	YDR138W	GID8	P40208	455 aa		4.68	□□□□□ -1.66
HPR1	YDR138W	RIC1	P40395	1056 aa		4.68	□□□□□ -1.66
HPR1	YDR138W	VHR1	P40522	640 aa		4.68	□□□□□ -1.66
HPR1	YDR138W	SMK1	P41808	388 aa		4.68	□□□□□ -1.66
HPR1	YDR138W	BUD9	P53226	547 aa		4.68	□□□□□ -1.66
HPR1	YDR138W	YGR250C	P53316	781 aa	Known RBP	4.68	□□□□□ -1.66
HPR1	YDR138W	HOL1	P53389	586 aa		4.68	□□□□□ -1.66
HPR1	YDR138W	TAF11	Q04226	346 aa		4.68	□□□□□ -1.66
HPR1	YDR138W	WHI4	Q07655	649 aa	Known RBP	4.68	□□□□□ -1.66
HPR1	YDR138W	VAS1	P07806	1104 aa	Known RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	UBC1	P21734	215 aa	Known RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	FRD1	P32614	470 aa	Known RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	WHI3	P34761	661 aa	Known RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	OYE3	P41816	400 aa	Predicted RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	TDA9	Q04545	1251 aa		4.67	□□□□□ -1.66
HPR1	YDR138W	TSR2	Q06672	205 aa	Known RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	PSF3	Q12146	194 aa		4.67	□□□□□ -1.66
HPR1	YDR138W	KCS1	Q12494	1050 aa		4.67	□□□□□ -1.66
HPR1	YDR138W	CBF2	P32504	956 aa		4.67	□□□□□ -1.66
HPR1	YDR138W	ECM32	P32644	1121 aa	Known RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	SAW1	P39735	261 aa		4.67	□□□□□ -1.66
HPR1	YDR138W	YEL068C	P39977	110 aa		4.67	□□□□□ -1.66
HPR1	YDR138W	YER010C	P40011	234 aa		4.67	□□□□□ -1.66
HPR1	YDR138W	SSY5	P47002	699 aa		4.67	□□□□□ -1.66
HPR1	YDR138W	ARE2	P53629	642 aa	Known RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	RVB2	Q12464	471 aa	Known RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	PCD1	Q12524	340 aa		4.67	□□□□□ -1.66
HPR1	YDR138W	PGA3	Q12746	312 aa	Known RBP	4.67	□□□□□ -1.66
HPR1	YDR138W	SPO16	P17122	198 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	NGG1	P32494	702 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	NUP120	P35729	1037 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	SET2	P46995	733 aa	Known RBP	4.66	□□□□□ -1.66
HPR1	YDR138W	XRS2	P33301	854 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	MDL2	P33311	773 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	CTF8	P38877	133 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	BUD8	P41698	603 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	VTC2	P43585	828 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	YGR012W	P53206	393 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	MRPL13	Q02204	264 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	SIZ1	Q04195	904 aa		4.66	□□□□□ -1.66
HPR1	YDR138W	RMA1	P36001	430 aa	Known RBP	4.65	□□□□□ -1.66
HPR1	YDR138W	JNM1	P36224	373 aa		4.65	□□□□□ -1.66
HPR1	YDR138W	CDS1	P38221	457 aa		4.65	□□□□□ -1.66
HPR1	YDR138W	YNL195C	P40168	261 aa		4.65	□□□□□ -1.66
HPR1	YDR138W	FAF1	P40546	346 aa	Predicted RBP	4.65	□□□□□ -1.66
HPR1	YDR138W	SGM1	P47166	707 aa		4.65	□□□□□ -1.66
HPR1	YDR138W	CTF18	P49956	741 aa		4.65	□□□□□ -1.66
HPR1	YDR138W	ACS1	Q01574	713 aa		4.65	□□□□□ -1.66
HPR1	YDR138W	YMR018W	Q04364	514 aa		4.65	□□□□□ -1.66
HPR1	YDR138W	POL3	P15436	1097 aa		4.65	□□□□□ -1.67
HPR1	YDR138W	RPS0A	P32905	252 aa	Known RBP	4.65	□□□□□ -1.67
HPR1	YDR138W	RFC5	P38251	354 aa		4.65	□□□□□ -1.67
HPR1	YDR138W	RAD26	P40352	1085 aa		4.65	□□□□□ -1.67
HPR1	YDR138W	RMD8	P43620	662 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms