RNA–Protein interactions for RNA: YDR135C

YCF1, Transcript of Vacuolar glutathione S-conjugate transporter, yeast

Gene YCF1, Length 4,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCF1	YDR135C	VMA22	P38784	181 aa		4.27	□□□□□ -1.73
YCF1	YDR135C	AIM21	P40563	679 aa		4.27	□□□□□ -1.73
YCF1	YDR135C	MKT1	P40850	830 aa	Known RBP	4.27	□□□□□ -1.73
YCF1	YDR135C	HOP2	P53187	214 aa		4.27	□□□□□ -1.73
YCF1	YDR135C	RET3	P53600	189 aa		4.27	□□□□□ -1.73
YCF1	YDR135C	TSR2	Q06672	205 aa	Known RBP	4.27	□□□□□ -1.73
YCF1	YDR135C	MCM21	Q06675	368 aa		4.27	□□□□□ -1.73
YCF1	YDR135C	SGO1	Q08490	590 aa		4.27	□□□□□ -1.73
YCF1	YDR135C	NTO1	Q12311	748 aa		4.27	□□□□□ -1.73
YCF1	YDR135C	NOT5	Q12514	560 aa	Predicted RBP	4.27	□□□□□ -1.73
YCF1	YDR135C	NUP120	P35729	1037 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	TRZ1	P36159	838 aa	Predicted RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	VHC1	P38329	1120 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	YHL008C	P38750	627 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	SAD1	P43589	448 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	COP1	P53622	1201 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	COQ9	Q05779	260 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	IMH1	Q06704	911 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	OXR1	Q08952	273 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	OM45	P16547	393 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
YCF1	YDR135C	KTR2	P33550	425 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	KAP104	P38217	918 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	PCF11	P39081	626 aa	Predicted RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	ALA1	P40825	983 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	DIM1	P41819	318 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	IOC3	P43596	787 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	YGL176C	P46945	554 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	PAN2	P53010	1115 aa	Predicted RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	NMA2	P53204	395 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	CIK1	Q01649	594 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	YDL114W	Q07530	308 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	YIG1	Q08956	461 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	BBP1	Q12365	385 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	TUF1	P02992	437 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	MAK16	P10962	306 aa	Predicted RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	MSS116	P15424	664 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	THR4	P16120	514 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	VMA2	P16140	517 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	STF2	P16965	84 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	CLB2	P24869	491 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	ICL1	P28240	557 aa	Predicted RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	PGM2	P37012	569 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	TIF5	P38431	405 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	SSP1	P38871	571 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	PET100	P38958	111 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	UBP15	P50101	1230 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	RTC4	P53850	401 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	DAK1	P54838	584 aa	Known RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	YDR239C	Q03780	787 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	YMR018W	Q04364	514 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	DIA2	Q08496	732 aa	Predicted RBP	4.26	□□□□□ -1.73
YCF1	YDR135C	GSC2	P40989	1895 aa		4.26	□□□□□ -1.73
YCF1	YDR135C	RAD10	P06838	210 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	STE6	P12866	1290 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	ATR1	P13090	542 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	SAN1	P22470	610 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	NPP1	P25353	742 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	GFD2	P25370	566 aa	Known RBP	4.25	□□□□□ -1.73
YCF1	YDR135C	RAD14	P28519	371 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	TYE7	P33122	291 aa	Predicted RBP	4.25	□□□□□ -1.73
YCF1	YDR135C	RRT2	P38332	387 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	RPH1	P39956	796 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	DSE1	P40077	573 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	SET2	P46995	733 aa	Known RBP	4.25	□□□□□ -1.73
YCF1	YDR135C	CTR1	P49573	406 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	NUT1	P53114	1132 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	SED5	Q01590	340 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	SWP1	Q02795	286 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	PEX15	Q08215	383 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	YPR202W	Q08993	238 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	GLE1	Q12315	538 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	FLO11	P08640	1367 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	COR1	P07256	457 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	KIN2	P13186	1147 aa	Known RBP	4.25	□□□□□ -1.73
YCF1	YDR135C	GYP6	P32806	458 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	TPO5	P36029	618 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	PIM1	P36775	1133 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	YBR285W	P38354	144 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	TRM5	P38793	499 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	SPC97	P38863	823 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	YJR054W	P47114	497 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	MRM2	P53123	320 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	YNL115C	P53925	644 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	PKH1	Q03407	766 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	DBP10	Q12389	995 aa	Known RBP	4.25	□□□□□ -1.73
YCF1	YDR135C	AI5_ALPHA	Q9ZZX1	630 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	POL30	P15873	258 aa	Known RBP	4.25	□□□□□ -1.73
YCF1	YDR135C	AFG2	P32794	780 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	ASG1	P40467	964 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	CIT3	P43635	486 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	JJJ2	P46997	583 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	MSN5	P52918	1224 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	TOS4	Q06266	489 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	BUG1	Q12191	341 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	RUP1	Q12242	671 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	VCX1	Q99385	411 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	YLR278C	Q05854	1341 aa		4.25	□□□□□ -1.73
YCF1	YDR135C	SSA1	P10591	642 aa	Known RBP	4.25	□□□□□ -1.73
YCF1	YDR135C	SSA2	P10592	639 aa	Known RBP	4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms