RNA–Protein interactions for RNA: YDR081C

PDC2, Transcript of Transcription factor for thiamine-regulated genes, yeastyeast

Gene PDC2, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC2YDR081C DAL7P21826 554 aa3.34□□□□□ -1.88
PDC2YDR081C RPC82P32349 654 aa3.34□□□□□ -1.88
PDC2YDR081C MCM10P32354 571 aa3.34□□□□□ -1.88
PDC2YDR081C PLC1P32383 869 aa3.34□□□□□ -1.88
PDC2YDR081C VMA8P32610 256 aaKnown RBP3.34□□□□□ -1.88
PDC2YDR081C STE13P33894 931 aa3.34□□□□□ -1.88
PDC2YDR081C ETP1P38748 585 aaKnown RBP3.34□□□□□ -1.88
PDC2YDR081C MET13P53128 600 aa3.34□□□□□ -1.88
PDC2YDR081C CDC45Q08032 650 aa3.34□□□□□ -1.88
PDC2YDR081C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
PDC2YDR081C YDR056CQ12025 205 aa3.34□□□□□ -1.88
PDC2YDR081C FAP7Q12055 197 aaPredicted RBP3.34□□□□□ -1.88
PDC2YDR081C NOP58Q12499 511 aaKnown RBP3.34□□□□□ -1.88
PDC2YDR081C CYC1P00044 109 aaPredicted RBP3.33□□□□□ -1.88
PDC2YDR081C GAL10P04397 699 aa3.33□□□□□ -1.88
PDC2YDR081C APA1P16550 321 aaKnown RBP3.33□□□□□ -1.88
PDC2YDR081C TPM1P17536 199 aaKnown RBP3.33□□□□□ -1.88
PDC2YDR081C PTP2P29461 750 aa3.33□□□□□ -1.88
PDC2YDR081C PUB1P32588 453 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
PDC2YDR081C SCT1P32784 759 aa3.33□□□□□ -1.88
PDC2YDR081C TMA108P40462 946 aa3.33□□□□□ -1.88
PDC2YDR081C NIT3P49954 291 aa3.33□□□□□ -1.88
PDC2YDR081C PLB2Q03674 706 aa3.33□□□□□ -1.88
PDC2YDR081C RSM24Q03976 319 aa3.33□□□□□ -1.88
PDC2YDR081C SSL1Q04673 461 aaPredicted RBP3.33□□□□□ -1.88
PDC2YDR081C YDR286CQ05530 114 aa3.33□□□□□ -1.88
PDC2YDR081C BRE4Q07660 1125 aa3.33□□□□□ -1.88
PDC2YDR081C RRP6Q12149 733 aaKnown RBP3.33□□□□□ -1.88
PDC2YDR081C PDR12Q02785 1511 aa3.33□□□□□ -1.88
PDC2YDR081C KIN2P13186 1147 aaKnown RBP3.33□□□□□ -1.88
PDC2YDR081C CHS3P29465 1165 aa3.33□□□□□ -1.88
PDC2YDR081C CCT3P39077 534 aaKnown RBP3.33□□□□□ -1.88
PDC2YDR081C RAI1P53063 387 aaKnown RBP3.33□□□□□ -1.88
PDC2YDR081C YGR012WP53206 393 aa3.33□□□□□ -1.88
PDC2YDR081C YDR514CQ04408 483 aa3.33□□□□□ -1.88
PDC2YDR081C DBP10Q12389 995 aaKnown RBP3.33□□□□□ -1.88
PDC2YDR081C YBR182C-AQ8TGU6 64 aa3.33□□□□□ -1.88
PDC2YDR081C SFL1P20134 766 aa3.32□□□□□ -1.88
PDC2YDR081C DBF20P32328 564 aa3.32□□□□□ -1.88
PDC2YDR081C TFC4P33339 1025 aa3.32□□□□□ -1.88
PDC2YDR081C PCM1P38628 557 aaKnown RBP3.32□□□□□ -1.88
PDC2YDR081C MAM1P40065 302 aa3.32□□□□□ -1.88
PDC2YDR081C INP52P50942 1183 aa3.32□□□□□ -1.88
PDC2YDR081C SDA1P53313 767 aaKnown RBP3.32□□□□□ -1.88
PDC2YDR081C YKR011CQ02209 353 aa3.32□□□□□ -1.88
PDC2YDR081C YDR338CQ05497 695 aa3.32□□□□□ -1.88
PDC2YDR081C ISA1Q07821 250 aaPredicted RBP3.32□□□□□ -1.88
PDC2YDR081C SSP2Q08646 371 aa3.32□□□□□ -1.88
PDC2YDR081C YPL191CQ08930 360 aa3.32□□□□□ -1.88
PDC2YDR081C RPO21P04050 1733 aaKnown RBP3.32□□□□□ -1.88
PDC2YDR081C SPT7P35177 1332 aa3.32□□□□□ -1.88
PDC2YDR081C RFA1P22336 621 aaKnown RBP3.32□□□□□ -1.88
PDC2YDR081C IMP2'P32351 346 aa3.32□□□□□ -1.88
PDC2YDR081C PXA2P34230 853 aa3.32□□□□□ -1.88
PDC2YDR081C ZRG8P40021 1076 aa3.32□□□□□ -1.88
PDC2YDR081C MND2P40577 368 aa3.32□□□□□ -1.88
PDC2YDR081C CEP3P40969 608 aa3.32□□□□□ -1.88
PDC2YDR081C ENV11P53246 860 aa3.32□□□□□ -1.88
PDC2YDR081C TIM11P81449 96 aaPredicted RBP3.32□□□□□ -1.88
PDC2YDR081C SPN1Q06505 410 aaPredicted RBP3.32□□□□□ -1.88
PDC2YDR081C TY1B-JR2P47100 1755 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C TY1B-ER2Q03619 1755 aa3.31□□□□□ -1.88
PDC2YDR081C TY1B-MR1Q04214 1755 aa3.31□□□□□ -1.88
PDC2YDR081C TY1B-MR2Q04670 1755 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C TY1B-LR1Q12088 1755 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C TY1B-NL1Q12112 1755 aa3.31□□□□□ -1.88
PDC2YDR081C TY1B-GR1Q12141 1755 aa3.31□□□□□ -1.88
PDC2YDR081C TY1B-BLQ12490 1755 aa3.31□□□□□ -1.88
PDC2YDR081C FBP1P09201 348 aa3.31□□□□□ -1.88
PDC2YDR081C HOG1P32485 435 aa3.31□□□□□ -1.88
PDC2YDR081C YEL1P34225 687 aa3.31□□□□□ -1.88
PDC2YDR081C YKL100CP34248 587 aa3.31□□□□□ -1.88
PDC2YDR081C NOP4P37838 685 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C RIM4P38741 713 aa3.31□□□□□ -1.88
PDC2YDR081C RRP8P38961 392 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C AIM14P53109 570 aa3.31□□□□□ -1.88
PDC2YDR081C NOG2P53742 486 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C SNP1Q00916 300 aaPredicted RBP3.31□□□□□ -1.88
PDC2YDR081C TRE2Q08693 809 aa3.31□□□□□ -1.88
PDC2YDR081C NEW1Q08972 1196 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C HAL9Q12180 1030 aa3.31□□□□□ -1.88
PDC2YDR081C GEA2P39993 1459 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C RNA1P11745 407 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C HMG1P12683 1054 aa3.31□□□□□ -1.88
PDC2YDR081C LRG1P35688 1017 aa3.31□□□□□ -1.88
PDC2YDR081C ATG33Q06485 197 aa3.31□□□□□ -1.88
PDC2YDR081C YPR172WQ06608 200 aa3.31□□□□□ -1.88
PDC2YDR081C WHI4Q07655 649 aaKnown RBP3.31□□□□□ -1.88
PDC2YDR081C HSF1P10961 833 aa3.3□□□□□ -1.88
PDC2YDR081C ENA1P13587 1091 aa3.3□□□□□ -1.88
PDC2YDR081C CYS3P31373 394 aaKnown RBP3.3□□□□□ -1.88
PDC2YDR081C TYE7P33122 291 aaPredicted RBP3.3□□□□□ -1.88
PDC2YDR081C YHL041WP38730 149 aa3.3□□□□□ -1.88
PDC2YDR081C POP2P39008 433 aa3.3□□□□□ -1.88
PDC2YDR081C SGM1P47166 707 aa3.3□□□□□ -1.88
PDC2YDR081C BNI5P53890 448 aaKnown RBP3.3□□□□□ -1.88
PDC2YDR081C ENA2Q01896 1091 aa3.3□□□□□ -1.88
PDC2YDR081C PGC1Q08959 321 aa3.3□□□□□ -1.88
PDC2YDR081C ENA5Q12691 1091 aa3.3□□□□□ -1.88
PDC2YDR081C CAT8P39113 1433 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms