RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W RPS17AP02407 136 aaKnown RBP6.8□□□□□ -1.32
TRP1YDR007W RPS17BP14127 136 aaKnown RBP6.8□□□□□ -1.32
TRP1YDR007W CLC1P17891 233 aa6.8□□□□□ -1.32
TRP1YDR007W DUN1P39009 513 aa6.8□□□□□ -1.32
TRP1YDR007W SAW1P39735 261 aa6.8□□□□□ -1.32
TRP1YDR007W YIL092WP40497 633 aa6.8□□□□□ -1.32
TRP1YDR007W VHR1P40522 640 aa6.8□□□□□ -1.32
TRP1YDR007W SAP185P40856 1058 aa6.8□□□□□ -1.32
TRP1YDR007W GCV2P49095 1034 aa6.8□□□□□ -1.32
TRP1YDR007W SVL3Q03088 825 aaKnown RBP6.8□□□□□ -1.32
TRP1YDR007W PLB2Q03674 706 aa6.8□□□□□ -1.32
TRP1YDR007W SGD1Q06132 899 aa6.8□□□□□ -1.32
TRP1YDR007W OMS1Q06668 471 aa6.8□□□□□ -1.32
TRP1YDR007W NUR1Q12066 484 aa6.8□□□□□ -1.32
TRP1YDR007W GPR1Q12361 961 aa6.8□□□□□ -1.32
TRP1YDR007W XRN1P22147 1528 aaKnown RBP6.8□□□□□ -1.32
TRP1YDR007W CDC26P14724 124 aa6.79□□□□□ -1.32
TRP1YDR007W NGG1P32494 702 aa6.79□□□□□ -1.32
TRP1YDR007W STE14P32584 239 aa6.79□□□□□ -1.32
TRP1YDR007W ASI2P53895 289 aa6.79□□□□□ -1.32
TRP1YDR007W CEG1Q01159 459 aaPredicted RBP6.79□□□□□ -1.32
TRP1YDR007W HIM1Q06674 414 aa6.79□□□□□ -1.32
TRP1YDR007W ISA1Q07821 250 aaPredicted RBP6.79□□□□□ -1.32
TRP1YDR007W MED7Q08278 222 aa6.79□□□□□ -1.32
TRP1YDR007W SWM1Q12379 170 aa6.79□□□□□ -1.32
TRP1YDR007W HIS5P07172 385 aa6.78□□□□□ -1.32
TRP1YDR007W PHO3P24031 467 aa6.78□□□□□ -1.32
TRP1YDR007W IMG2P25642 146 aaPredicted RBP6.78□□□□□ -1.32
TRP1YDR007W MSH1P25846 959 aa6.78□□□□□ -1.32
TRP1YDR007W SSH4P32343 579 aa6.78□□□□□ -1.32
TRP1YDR007W HXT4P32467 576 aa6.78□□□□□ -1.32
TRP1YDR007W PET309P32522 965 aaPredicted RBP6.78□□□□□ -1.32
TRP1YDR007W SDS22P36047 338 aa6.78□□□□□ -1.32
TRP1YDR007W EXO84P38261 753 aa6.78□□□□□ -1.32
TRP1YDR007W EAF5P39995 279 aa6.78□□□□□ -1.32
TRP1YDR007W VID27P40157 782 aa6.78□□□□□ -1.32
TRP1YDR007W ENP2P48234 707 aaKnown RBP6.78□□□□□ -1.32
TRP1YDR007W PRP31P49704 494 aaPredicted RBP6.78□□□□□ -1.32
TRP1YDR007W EXG2P52911 562 aa6.78□□□□□ -1.32
TRP1YDR007W TEP1P53916 434 aa6.78□□□□□ -1.32
TRP1YDR007W PKH1Q03407 766 aa6.78□□□□□ -1.32
TRP1YDR007W LAM1P38851 1228 aa6.77□□□□□ -1.33
TRP1YDR007W MSS4P38994 779 aa6.77□□□□□ -1.33
TRP1YDR007W STL1P39932 569 aa6.77□□□□□ -1.33
TRP1YDR007W VPS27P40343 622 aaKnown RBP6.77□□□□□ -1.33
TRP1YDR007W IES1P43579 692 aa6.77□□□□□ -1.33
TRP1YDR007W SNO2P53823 222 aa6.77□□□□□ -1.33
TRP1YDR007W YPS7Q06325 596 aa6.77□□□□□ -1.33
TRP1YDR007W VHS3Q08438 674 aa6.77□□□□□ -1.33
TRP1YDR007W PUS1Q12211 544 aaKnown RBP6.77□□□□□ -1.33
TRP1YDR007W YLR415CO13578 112 aa6.76□□□□□ -1.33
TRP1YDR007W SEC18P18759 758 aaKnown RBP6.76□□□□□ -1.33
TRP1YDR007W TOS1P38288 455 aa6.76□□□□□ -1.33
TRP1YDR007W IRC5P43610 853 aa6.76□□□□□ -1.33
TRP1YDR007W CHA4P43634 648 aa6.76□□□□□ -1.33
TRP1YDR007W YRB30P53107 440 aaPredicted RBP6.76□□□□□ -1.33
TRP1YDR007W SIN3P22579 1536 aa6.76□□□□□ -1.33
TRP1YDR007W YEL076C-AP0CX16 216 aa6.75□□□□□ -1.33
TRP1YDR007W YLR464WP0CX17 216 aa6.75□□□□□ -1.33
TRP1YDR007W PYC1P11154 1178 aaKnown RBP6.75□□□□□ -1.33
TRP1YDR007W SEC21P32074 935 aaKnown RBP6.75□□□□□ -1.33
TRP1YDR007W MF(ALPHA)2P32435 120 aa6.75□□□□□ -1.33
TRP1YDR007W YKR073CP36153 106 aa6.75□□□□□ -1.33
TRP1YDR007W ERP2P39704 215 aa6.75□□□□□ -1.33
TRP1YDR007W YEL076CP39971 216 aa6.75□□□□□ -1.33
TRP1YDR007W GID8P40208 455 aa6.75□□□□□ -1.33
TRP1YDR007W NCS6P53088 359 aa6.75□□□□□ -1.33
TRP1YDR007W MTD1Q02046 320 aaKnown RBP6.75□□□□□ -1.33
TRP1YDR007W YML131WQ03102 365 aa6.75□□□□□ -1.33
TRP1YDR007W BRE1Q07457 700 aaKnown RBP6.75□□□□□ -1.33
TRP1YDR007W GPB1Q08886 897 aa6.75□□□□□ -1.33
TRP1YDR007W PSF3Q12146 194 aa6.75□□□□□ -1.33
TRP1YDR007W ARP7Q12406 477 aa6.75□□□□□ -1.33
TRP1YDR007W KOG1P38873 1557 aa6.74□□□□□ -1.33
TRP1YDR007W ACO1P19414 778 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
TRP1YDR007W MSM1P22438 575 aa6.74□□□□□ -1.33
TRP1YDR007W PET127P32606 800 aa6.74□□□□□ -1.33
TRP1YDR007W APT2P36973 181 aa6.74□□□□□ -1.33
TRP1YDR007W YBR259WP38338 688 aa6.74□□□□□ -1.33
TRP1YDR007W ARG5,6Q01217 863 aa6.74□□□□□ -1.33
TRP1YDR007W REC102Q02721 264 aa6.74□□□□□ -1.33
TRP1YDR007W HLR1Q04429 423 aa6.74□□□□□ -1.33
TRP1YDR007W STP4Q07351 490 aa6.74□□□□□ -1.33
TRP1YDR007W HMI1Q12039 706 aa6.74□□□□□ -1.33
TRP1YDR007W YDL177CQ12257 170 aa6.74□□□□□ -1.33
TRP1YDR007W KCS1Q12494 1050 aa6.74□□□□□ -1.33
TRP1YDR007W REV3P14284 1504 aa6.73□□□□□ -1.33
TRP1YDR007W TUB3P09734 445 aaKnown RBP6.73□□□□□ -1.33
TRP1YDR007W PRP4P20053 465 aaKnown RBP6.73□□□□□ -1.33
TRP1YDR007W ADE2P21264 571 aaKnown RBP6.73□□□□□ -1.33
TRP1YDR007W EMC1P25574 760 aa6.73□□□□□ -1.33
TRP1YDR007W TGL1P34163 548 aa6.73□□□□□ -1.33
TRP1YDR007W LRG1P35688 1017 aa6.73□□□□□ -1.33
TRP1YDR007W RIX1P38883 763 aaPredicted RBP6.73□□□□□ -1.33
TRP1YDR007W MEF2P39677 819 aa6.73□□□□□ -1.33
TRP1YDR007W SCS2P40075 244 aaKnown RBP6.73□□□□□ -1.33
TRP1YDR007W RXT3Q07458 294 aa6.73□□□□□ -1.33
TRP1YDR007W SGO1Q08490 590 aa6.73□□□□□ -1.33
TRP1YDR007W FRS1P15624 595 aaKnown RBP6.72□□□□□ -1.33
TRP1YDR007W APL2P36000 726 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms