RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C VTI1Q04338 217 aa5.54□□□□□ -1.52
ATG20YDL113C YMR018WQ04364 514 aa5.54□□□□□ -1.52
ATG20YDL113C IWR1Q07532 353 aaPredicted RBP5.54□□□□□ -1.52
ATG20YDL113C NUR1Q12066 484 aa5.54□□□□□ -1.52
ATG20YDL113C HVG1P0CE11 249 aa5.54□□□□□ -1.52
ATG20YDL113C RPL4AP10664 362 aaKnown RBP5.54□□□□□ -1.52
ATG20YDL113C MAS2P11914 482 aa5.54□□□□□ -1.52
ATG20YDL113C RPB10P22139 70 aa5.54□□□□□ -1.52
ATG20YDL113C RRT12P25381 491 aa5.54□□□□□ -1.52
ATG20YDL113C BLI1P35727 113 aa5.54□□□□□ -1.52
ATG20YDL113C RGD1P38339 666 aa5.54□□□□□ -1.52
ATG20YDL113C LCP5P40079 357 aaPredicted RBP5.54□□□□□ -1.52
ATG20YDL113C MID1P41821 548 aa5.54□□□□□ -1.52
ATG20YDL113C RPL4BP49626 362 aaKnown RBP5.54□□□□□ -1.52
ATG20YDL113C CUL3P53202 744 aa5.54□□□□□ -1.52
ATG20YDL113C TRS130Q03660 1102 aa5.54□□□□□ -1.52
ATG20YDL113C ECI1Q05871 280 aa5.54□□□□□ -1.52
ATG20YDL113C SPO21Q12411 609 aa5.54□□□□□ -1.52
ATG20YDL113C YLR462WO13556 202 aa5.53□□□□□ -1.52
ATG20YDL113C SNF1P06782 633 aaKnown RBP5.53□□□□□ -1.52
ATG20YDL113C KIN82P25341 720 aa5.53□□□□□ -1.52
ATG20YDL113C PEP7P32609 515 aa5.53□□□□□ -1.52
ATG20YDL113C CSG2P35206 410 aa5.53□□□□□ -1.52
ATG20YDL113C GDT1P38301 280 aaPredicted RBP5.53□□□□□ -1.52
ATG20YDL113C YBR197CP38306 217 aa5.53□□□□□ -1.52
ATG20YDL113C KSP1P38691 1029 aaKnown RBP5.53□□□□□ -1.52
ATG20YDL113C YHL049CP38722 271 aa5.53□□□□□ -1.52
ATG20YDL113C YEL075CP39972 122 aa5.53□□□□□ -1.52
ATG20YDL113C NPP2P39997 493 aa5.53□□□□□ -1.52
ATG20YDL113C YER189WP40104 122 aa5.53□□□□□ -1.52
ATG20YDL113C YNL320WP42840 284 aa5.53□□□□□ -1.52
ATG20YDL113C YFL064CP43540 174 aa5.53□□□□□ -1.52
ATG20YDL113C SCD6P45978 349 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52 RIP-Chip
ATG20YDL113C SGM1P47166 707 aa5.53□□□□□ -1.52
ATG20YDL113C DRN1P53255 507 aaKnown RBP5.53□□□□□ -1.52
ATG20YDL113C MDR1P53258 950 aa5.53□□□□□ -1.52
ATG20YDL113C RPA49Q01080 415 aaPredicted RBP5.53□□□□□ -1.52
ATG20YDL113C SYH1Q02875 849 aaKnown RBP5.53□□□□□ -1.52
ATG20YDL113C NOP6Q07623 225 aaKnown RBP5.53□□□□□ -1.52
ATG20YDL113C ABP140Q08641 628 aaKnown RBP5.53□□□□□ -1.52
ATG20YDL113C APL5Q08951 932 aaKnown RBP5.53□□□□□ -1.52
ATG20YDL113C AIM41Q12032 185 aa5.53□□□□□ -1.52
ATG20YDL113C YBL111CQ3E7Y5 667 aa5.53□□□□□ -1.52
ATG20YDL113C CDC42P19073 191 aa5.52□□□□□ -1.53
ATG20YDL113C GPI10P30777 616 aa5.52□□□□□ -1.53
ATG20YDL113C EFT1P32324 842 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C GCG1P32656 232 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C SMY2P32909 740 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C LAS1P36146 502 aaPredicted RBP5.52□□□□□ -1.53
ATG20YDL113C APE3P37302 537 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C RCK2P38623 610 aa5.52□□□□□ -1.53
ATG20YDL113C PSY2P40164 858 aa5.52□□□□□ -1.53
ATG20YDL113C NMD5P46970 1048 aa5.52□□□□□ -1.53
ATG20YDL113C MNP1P53163 194 aaPredicted RBP5.52□□□□□ -1.53
ATG20YDL113C RIM8P53179 542 aa5.52□□□□□ -1.53
ATG20YDL113C YOR059CQ08448 450 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C ISU2Q12056 156 aa5.52□□□□□ -1.53
ATG20YDL113C SEC2P17065 759 aa5.52□□□□□ -1.53
ATG20YDL113C KAR3P17119 729 aa5.52□□□□□ -1.53
ATG20YDL113C PRP9P19736 530 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C RNR1P21524 888 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C GCD6P32501 712 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C PET112P33893 541 aa5.52□□□□□ -1.53
ATG20YDL113C MUD2P36084 527 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C OLA1P38219 394 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C BSD2P38356 321 aa5.52□□□□□ -1.53
ATG20YDL113C VPS41P38959 992 aa5.52□□□□□ -1.53
ATG20YDL113C YTA12P40341 825 aa5.52□□□□□ -1.53
ATG20YDL113C RAD26P40352 1085 aa5.52□□□□□ -1.53
ATG20YDL113C CTK3P46963 296 aaPredicted RBP5.52□□□□□ -1.53
ATG20YDL113C YGR111WP53265 400 aa5.52□□□□□ -1.53
ATG20YDL113C PPM1Q04081 328 aa5.52□□□□□ -1.53
ATG20YDL113C YDR222WQ04925 415 aa5.52□□□□□ -1.53
ATG20YDL113C HDA3Q06623 655 aa5.52□□□□□ -1.53
ATG20YDL113C ACM1Q08981 209 aa5.52□□□□□ -1.53
ATG20YDL113C YOR223WQ12015 292 aa5.52□□□□□ -1.53
ATG20YDL113C RUD3Q12234 484 aaKnown RBP5.52□□□□□ -1.53
ATG20YDL113C YOR131CQ12486 218 aa5.52□□□□□ -1.53
ATG20YDL113C YGR161W-CQ3E744 92 aa5.52□□□□□ -1.53
ATG20YDL113C ECM3Q99252 613 aa5.52□□□□□ -1.53
ATG20YDL113C TY1A-DR4O74302 440 aa5.51□□□□□ -1.53
ATG20YDL113C ARG4P04076 463 aaPredicted RBP5.51□□□□□ -1.53
ATG20YDL113C TY1A-HP0C2I4 478 aaKnown RBP5.51□□□□□ -1.53
ATG20YDL113C TY1A-AP0CX57 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-PR1P0CX58 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-ORP0CX59 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-PR2P0CX60 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-DR5P0CX65 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-ER2P0CX66 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-GR3P0CX67 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-LR1P0CX68 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-MR2P0CX69 440 aa5.51□□□□□ -1.53
ATG20YDL113C PRR1P28708 518 aa5.51□□□□□ -1.53
ATG20YDL113C DBF4P32325 704 aa5.51□□□□□ -1.53
ATG20YDL113C TMT1P32643 299 aa5.51□□□□□ -1.53
ATG20YDL113C RGT1P32862 1170 aa5.51□□□□□ -1.53
ATG20YDL113C DAS1P47005 663 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-JR2P47099 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-DR1Q03856 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-ML1Q04706 440 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms