RNA–Protein interactions for RNA: YDL107W

MSS2, Transcript of Peripherally bound inner membrane protein of the mitochondrial matrix, yeast

Gene MSS2, Length 1,056 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS2	YDL107W	TRM11	Q12463	433 aa		5.27	□□□□□ -1.57
MSS2	YDL107W	ATP4	P05626	244 aa		5.26	□□□□□ -1.57
MSS2	YDL107W	TRP4	P07285	380 aa	Predicted RBP	5.26	□□□□□ -1.57
MSS2	YDL107W	SST2	P11972	698 aa	Known RBP	5.26	□□□□□ -1.57
MSS2	YDL107W	EFT1	P32324	842 aa	Known RBP	5.26	□□□□□ -1.57
MSS2	YDL107W	AIM21	P40563	679 aa		5.26	□□□□□ -1.57
MSS2	YDL107W	FKH2	P41813	862 aa		5.26	□□□□□ -1.57
MSS2	YDL107W	MSE1	P48525	536 aa		5.26	□□□□□ -1.57
MSS2	YDL107W	YBP2	P53169	641 aa		5.26	□□□□□ -1.57
MSS2	YDL107W	PUS9	Q12069	462 aa		5.26	□□□□□ -1.57
MSS2	YDL107W	COX11	P19516	300 aa	Known RBP	5.25	□□□□□ -1.57
MSS2	YDL107W	HCA4	P20448	770 aa	Known RBP	5.25	□□□□□ -1.57
MSS2	YDL107W	HEM12	P32347	362 aa	Predicted RBP	5.25	□□□□□ -1.57
MSS2	YDL107W	NGG1	P32494	702 aa		5.25	□□□□□ -1.57
MSS2	YDL107W	OAF3	P36023	863 aa		5.25	□□□□□ -1.57
MSS2	YDL107W	SSZ1	P38788	538 aa	Known RBP	5.25	□□□□□ -1.57
MSS2	YDL107W	EMP65	P40085	556 aa		5.25	□□□□□ -1.57
MSS2	YDL107W	YJR039W	P47107	1121 aa		5.25	□□□□□ -1.57
MSS2	YDL107W	PHM6	Q05637	104 aa		5.25	□□□□□ -1.57
MSS2	YDL107W	YLR040C	Q07988	224 aa		5.25	□□□□□ -1.57
MSS2	YDL107W	GPR1	Q12361	961 aa		5.25	□□□□□ -1.57
MSS2	YDL107W	YLR415C	O13578	112 aa		5.24	□□□□□ -1.57
MSS2	YDL107W	ERG4	P25340	473 aa		5.24	□□□□□ -1.57
MSS2	YDL107W	NIC96	P34077	839 aa		5.24	□□□□□ -1.57
MSS2	YDL107W	FAT1	P38225	669 aa		5.24	□□□□□ -1.57
MSS2	YDL107W	YHR202W	P38887	602 aa		5.24	□□□□□ -1.57
MSS2	YDL107W	BRE5	P53741	515 aa	Known RBP	5.24	□□□□□ -1.57
MSS2	YDL107W	LEE1	Q02799	301 aa	Known RBP	5.24	□□□□□ -1.57
MSS2	YDL107W	YKU70	P32807	602 aa		5.23	□□□□□ -1.57
MSS2	YDL107W	SER1	P33330	395 aa	Known RBP	5.23	□□□□□ -1.57
MSS2	YDL107W	SUL1	P38359	859 aa		5.23	□□□□□ -1.57
MSS2	YDL107W	PMC1	P38929	1173 aa	Predicted RBP	5.23	□□□□□ -1.57
MSS2	YDL107W	RNR4	P49723	345 aa	Known RBP	5.23	□□□□□ -1.57
MSS2	YDL107W	APM4	Q99186	491 aa		5.23	□□□□□ -1.57
MSS2	YDL107W	AKL1	P38080	1108 aa	Known RBP	5.22	□□□□□ -1.57
MSS2	YDL107W	APN2	P38207	520 aa		5.22	□□□□□ -1.57
MSS2	YDL107W	SET2	P46995	733 aa	Known RBP	5.22	□□□□□ -1.57
MSS2	YDL107W	PRP31	P49704	494 aa	Predicted RBP	5.22	□□□□□ -1.57
MSS2	YDL107W	MUP1	P50276	574 aa		5.22	□□□□□ -1.57
MSS2	YDL107W	SLI1	P53304	468 aa		5.22	□□□□□ -1.57
MSS2	YDL107W	MET14	Q02196	202 aa		5.22	□□□□□ -1.57
MSS2	YDL107W	NRG1	Q03125	231 aa		5.22	□□□□□ -1.57
MSS2	YDL107W	YMR210W	Q03649	449 aa		5.22	□□□□□ -1.57
MSS2	YDL107W	YLR407W	Q06070	228 aa		5.22	□□□□□ -1.57
MSS2	YDL107W	SWI6	P09959	803 aa		5.21	□□□□□ -1.58
MSS2	YDL107W	KTR4	P38131	464 aa		5.21	□□□□□ -1.58
MSS2	YDL107W	BEM4	P39011	633 aa		5.21	□□□□□ -1.58
MSS2	YDL107W	PIP2	P52960	996 aa		5.21	□□□□□ -1.58
MSS2	YDL107W	ECM38	Q05902	660 aa	Predicted RBP	5.21	□□□□□ -1.58
MSS2	YDL107W	ISA1	Q07821	250 aa	Predicted RBP	5.21	□□□□□ -1.58
MSS2	YDL107W	PEX15	Q08215	383 aa		5.21	□□□□□ -1.58
MSS2	YDL107W	YOL073C	Q08232	322 aa		5.21	□□□□□ -1.58
MSS2	YDL107W	PNS1	Q12412	539 aa		5.21	□□□□□ -1.58
MSS2	YDL107W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
MSS2	YDL107W	GAL1	P04385	528 aa		5.2	□□□□□ -1.58
MSS2	YDL107W	GLN4	P13188	809 aa	Known RBP	5.2	□□□□□ -1.58
MSS2	YDL107W	KCC4	P25389	1037 aa		5.2	□□□□□ -1.58
MSS2	YDL107W	YKL133C	P36066	463 aa		5.2	□□□□□ -1.58
MSS2	YDL107W	ELO3	P40319	345 aa		5.2	□□□□□ -1.58
MSS2	YDL107W	NOP15	P53927	220 aa	Predicted RBP	5.2	□□□□□ -1.58
MSS2	YDL107W	DLT1	Q04216	342 aa		5.2	□□□□□ -1.58
MSS2	YDL107W	VMS1	Q04311	632 aa	Known RBP	5.2	□□□□□ -1.58
MSS2	YDL107W	TGL5	Q12043	749 aa		5.2	□□□□□ -1.58
MSS2	YDL107W	ALG7	P07286	448 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	MET3	P08536	511 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	ATP12	P22135	325 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	PTP2	P29461	750 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	YBR259W	P38338	688 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	CHS7	P38843	316 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	DUN1	P39009	513 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	VID28	P40547	921 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	TAN1	P53072	289 aa	Predicted RBP	5.19	□□□□□ -1.58
MSS2	YDL107W	RNT1	Q02555	471 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	YMR206W	Q03695	313 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	VHS3	Q08438	674 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	FRE5	Q08908	694 aa		5.19	□□□□□ -1.58
MSS2	YDL107W	RPS17A	P02407	136 aa	Known RBP	5.18	□□□□□ -1.58
MSS2	YDL107W	CAF20	P12962	161 aa	Known RBP	5.18	□□□□□ -1.58
MSS2	YDL107W	RPS17B	P14127	136 aa	Known RBP	5.18	□□□□□ -1.58
MSS2	YDL107W	ADE2	P21264	571 aa	Known RBP	5.18	□□□□□ -1.58
MSS2	YDL107W	PWP2	P25635	923 aa	Known RBP	5.18	□□□□□ -1.58
MSS2	YDL107W	IMG2	P25642	146 aa	Predicted RBP	5.18	□□□□□ -1.58
MSS2	YDL107W	DGR2	P32330	852 aa		5.18	□□□□□ -1.58
MSS2	YDL107W	TRZ1	P36159	838 aa	Predicted RBP	5.18	□□□□□ -1.58
MSS2	YDL107W	APT2	P36973	181 aa		5.18	□□□□□ -1.58
MSS2	YDL107W	RIM4	P38741	713 aa		5.18	□□□□□ -1.58
MSS2	YDL107W	COX18	P53239	316 aa		5.18	□□□□□ -1.58
MSS2	YDL107W	MLC2	Q06580	163 aa		5.18	□□□□□ -1.58
MSS2	YDL107W	PYC1	P11154	1178 aa	Known RBP	5.17	□□□□□ -1.58
MSS2	YDL107W	VPS24	P36095	224 aa	Known RBP	5.17	□□□□□ -1.58
MSS2	YDL107W	YBR053C	P38235	358 aa		5.17	□□□□□ -1.58
MSS2	YDL107W	SIC1	P38634	284 aa		5.17	□□□□□ -1.58
MSS2	YDL107W	HIS6	P40545	261 aa		5.17	□□□□□ -1.58
MSS2	YDL107W	HOL1	P53389	586 aa		5.17	□□□□□ -1.58
MSS2	YDL107W	ARG5,6	Q01217	863 aa		5.17	□□□□□ -1.58
MSS2	YDL107W	REC102	Q02721	264 aa		5.17	□□□□□ -1.58
MSS2	YDL107W	ATG16	Q03818	150 aa		5.17	□□□□□ -1.58
MSS2	YDL107W	NGL1	Q08213	363 aa	Known RBP	5.17	□□□□□ -1.58
MSS2	YDL107W	SGO1	Q08490	590 aa		5.17	□□□□□ -1.58
MSS2	YDL107W	PPS1	P38148	807 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms