RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	MIP6	P38760	659 aa	Known RBP	4.94	□□□□□ -1.62
RTK1	YDL025C	MNT3	P40549	630 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	PSP2	P50109	593 aa	Known RBP	4.94	□□□□□ -1.62
RTK1	YDL025C	ORC4	P54791	529 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	GTR1	Q00582	310 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	MDM1	Q01846	1127 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	YMR018W	Q04364	514 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RTK1	YDL025C	NEW1	Q08972	1196 aa	Known RBP	4.94	□□□□□ -1.62
RTK1	YDL025C	PHM7	Q12252	991 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	YOL087C	Q99247	1116 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	SSM4	P40318	1319 aa		4.93	□□□□□ -1.62
RTK1	YDL025C	CMP2	P14747	604 aa		4.93	□□□□□ -1.62
RTK1	YDL025C	CHS3	P29465	1165 aa		4.93	□□□□□ -1.62
RTK1	YDL025C	SRP68	P38687	599 aa	Known RBP	4.93	□□□□□ -1.62
RTK1	YDL025C	BEM4	P39011	633 aa		4.93	□□□□□ -1.62
RTK1	YDL025C	MTR3	P48240	250 aa	Predicted RBP	4.93	□□□□□ -1.62
RTK1	YDL025C	LEE1	Q02799	301 aa	Known RBP	4.93	□□□□□ -1.62
RTK1	YDL025C	TRS130	Q03660	1102 aa		4.93	□□□□□ -1.62
RTK1	YDL025C	RIB2	Q12362	591 aa	Known RBP	4.93	□□□□□ -1.62
RTK1	YDL025C	ARP7	Q12406	477 aa		4.93	□□□□□ -1.62
RTK1	YDL025C	CDC26	P14724	124 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	AKL1	P38080	1108 aa	Known RBP	4.92	□□□□□ -1.62
RTK1	YDL025C	DUN1	P39009	513 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	STL1	P39932	569 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	ESF2	P53743	316 aa	Known RBP	4.92	□□□□□ -1.62
RTK1	YDL025C	SSY1	Q03770	852 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	HLR1	Q04429	423 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	THI72	Q08579	599 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	KCS1	Q12494	1050 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	NTE1	Q04958	1679 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	FBP1	P09201	348 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	HXT4	P32467	576 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	PSY4	P38193	441 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	MCX1	P38323	520 aa	Predicted RBP	4.92	□□□□□ -1.62
RTK1	YDL025C	SAK1	P38990	1142 aa		4.92	□□□□□ -1.62
RTK1	YDL025C	GIR2	Q03768	265 aa	Predicted RBP	4.92	□□□□□ -1.62
RTK1	YDL025C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
RTK1	YDL025C	RPS17A	P02407	136 aa	Known RBP	4.91	□□□□□ -1.62
RTK1	YDL025C	RPS17B	P14127	136 aa	Known RBP	4.91	□□□□□ -1.62
RTK1	YDL025C	SHM2	P37291	469 aa	Known RBP	4.91	□□□□□ -1.62
RTK1	YDL025C	APM3	P38153	483 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	PPE1	P38796	400 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	YHR078W	P38799	552 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	SCS2	P40075	244 aa	Known RBP	4.91	□□□□□ -1.62
RTK1	YDL025C	TMA108	P40462	946 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	SET2	P46995	733 aa	Known RBP	4.91	□□□□□ -1.62
RTK1	YDL025C	SIZ1	Q04195	904 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	CIA1	Q05583	330 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	TDA6	Q06466	467 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	OPY2	Q06810	360 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	MCH5	Q08777	521 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	PSF3	Q12146	194 aa		4.91	□□□□□ -1.62
RTK1	YDL025C	YEL076C-A	P0CX16	216 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	YLR464W	P0CX17	216 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	TGL1	P34163	548 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	APN2	P38207	520 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	SAF1	P38352	637 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	PZF1	P39933	429 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	YEL076C	P39971	216 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	IES1	P43579	692 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	IRC5	P43610	853 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	FOL2	P51601	243 aa	Known RBP	4.9	□□□□□ -1.62
RTK1	YDL025C	MTD1	Q02046	320 aa	Known RBP	4.9	□□□□□ -1.62
RTK1	YDL025C	YDR056C	Q12025	205 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	VPS15	P22219	1454 aa		4.9	□□□□□ -1.62
RTK1	YDL025C	SCC2	Q04002	1493 aa		4.9	□□□□□ -1.63
RTK1	YDL025C	HSC82	P15108	705 aa	Known RBP	4.9	□□□□□ -1.63
RTK1	YDL025C	RER1	P25560	188 aa		4.9	□□□□□ -1.63
RTK1	YDL025C	IMG2	P25642	146 aa	Predicted RBP	4.9	□□□□□ -1.63
RTK1	YDL025C	NGG1	P32494	702 aa		4.9	□□□□□ -1.63
RTK1	YDL025C	JNM1	P36224	373 aa		4.9	□□□□□ -1.63
RTK1	YDL025C	ICP55	P40051	511 aa		4.9	□□□□□ -1.63
RTK1	YDL025C	NSG2	P53898	299 aa		4.9	□□□□□ -1.63
RTK1	YDL025C	ASM4	Q05166	528 aa		4.9	□□□□□ -1.63
RTK1	YDL025C	ISA1	Q07821	250 aa	Predicted RBP	4.9	□□□□□ -1.63
RTK1	YDL025C	TY2B-LR1	P0C2J3	1770 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	TY2B-F	P0CX63	1770 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	TY2B-GR2	P0CX64	1770 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	TY2B-C	P25384	1770 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	TY2B-DR2	Q03494	1770 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	TY1B-DR1	Q03855	1755 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.89	□□□□□ -1.63
RTK1	YDL025C	TY2B-OR1	Q12113	1770 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	TY2B-DR1	Q12472	1770 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	TY2B-OR2	Q12501	1770 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	SPE1	P08432	466 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	ADH4	P10127	382 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	YCK2	P23292	546 aa	Known RBP	4.89	□□□□□ -1.63
RTK1	YDL025C	CTF8	P38877	133 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	SDP1	P40479	209 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	MAD3	P47074	515 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	EXG2	P52911	562 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	YBP2	P53169	641 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	MDG1	P53885	366 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	YPS7	Q06325	596 aa		4.89	□□□□□ -1.63
RTK1	YDL025C	URN1	Q06525	465 aa	Known RBP	4.89	□□□□□ -1.63
RTK1	YDL025C	CHS2	P14180	963 aa		4.88	□□□□□ -1.63
RTK1	YDL025C	GFA1	P14742	717 aa	Known RBP	4.88	□□□□□ -1.63
RTK1	YDL025C	MSB1	P21339	1137 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms