RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCA1	YBR295W	HER2	Q03557	464 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	EAF1	Q06337	982 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	FRS2	P15625	503 aa	Known RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	MYO3	P36006	1272 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
PCA1	YBR295W	DLD3	P39976	496 aa	Known RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	SAP185	P40856	1058 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	RET2	P43621	546 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	YJL181W	P46987	611 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	YJR039W	P47107	1121 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	SAP4	P53036	818 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	RPM2	Q02773	1202 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	SWP1	Q02795	286 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	ELP3	Q02908	557 aa	Known RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	ADY3	Q07732	790 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	RIB2	Q12362	591 aa	Known RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	ARP6	Q12509	438 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	CBP6	P07253	162 aa	Predicted RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	REC107	P21651	314 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	RVS161	P25343	265 aa	Known RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	SRB4	P32569	687 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	DDI1	P40087	428 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	JLP2	P40206	208 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	GID8	P40208	455 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	LOC1	P43586	204 aa	Predicted RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	RFX1	P48743	811 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	SIW14	P53965	281 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	MEC3	Q02574	474 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	DIB1	Q06819	143 aa	Predicted RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	ALR1	Q08269	859 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	GPN2	Q08726	347 aa	Predicted RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	YDL109C	Q12103	647 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	HIS4	P00815	799 aa	Known RBP	4.85	□□□□□ -1.63
PCA1	YBR295W	PBS2	P08018	668 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	OM45	P16547	393 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	CLB2	P24869	491 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	HSE1	P38753	452 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	VPS8	P39702	1274 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	NOP9	P47077	666 aa	Known RBP	4.85	□□□□□ -1.63
PCA1	YBR295W	DTD1	Q07648	150 aa	Known RBP	4.85	□□□□□ -1.63
PCA1	YBR295W	SGT1	Q08446	395 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	TRM8	Q12009	286 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	KSS1	P14681	368 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	URA4	P20051	364 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	GRX4	P32642	244 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	SPT10	P35208	640 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	UBP11	P36026	717 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	APM3	P38153	483 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	ALG3	P38179	458 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	RIM11	P38615	370 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	NPT1	P39683	429 aa	Known RBP	4.85	□□□□□ -1.63
PCA1	YBR295W	JEM1	P40358	645 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	MDJ2	P42834	146 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	NIS1	P53939	407 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	PRO2	P54885	456 aa	Known RBP	4.85	□□□□□ -1.63
PCA1	YBR295W	EGD1	Q02642	157 aa	Known RBP	4.85	□□□□□ -1.63
PCA1	YBR295W	YCG1	Q06680	1035 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	PGC1	Q08959	321 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	VIK1	Q12045	647 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	RRI2	Q12348	645 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	APM4	Q99186	491 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	YRF1-1	P0CX20	1796 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	YRF1-5	P0CX21	1796 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	YRF1-8	P0CX22	1796 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	DBF20	P32328	564 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	ALD5	P40047	520 aa	Known RBP	4.85	□□□□□ -1.63
PCA1	YBR295W	MRPL50	P53724	139 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	NAF1	P53919	492 aa	Known RBP	4.85	□□□□□ -1.63
PCA1	YBR295W	MAK10	Q02197	733 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	HFD1	Q04458	532 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	SKM1	Q12469	655 aa		4.85	□□□□□ -1.63
PCA1	YBR295W	THS1	P04801	734 aa	Known RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	LPD1	P09624	499 aa	Known RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	SCJ1	P25303	377 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	PGS1	P25578	521 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	URA1	P28272	314 aa	Predicted RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	MTC2	P34246	357 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	CSE4	P36012	229 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	GLG1	P36143	616 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	SPO22	P40511	975 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	YNL193W	P53870	558 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	RVB1	Q03940	463 aa	Known RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	RAV1	P47104	1357 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	SIR3	P06701	978 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	YBR287W	P38355	427 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	AST2	P39945	430 aa	Known RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	AIM9	P40053	627 aa	Known RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	QRI1	P43123	477 aa	Known RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	SAP155	P43612	1002 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	UPF3	P48412	387 aa	Known RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	MPS1	P54199	764 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	WAR1	Q03631	944 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	BUL2	Q03758	920 aa	Known RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	NKP2	Q06162	153 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	MLC2	Q06580	163 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	VIP1	Q06685	1146 aa	Known RBP	4.84	□□□□□ -1.63
PCA1	YBR295W	YPD1	Q07688	167 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	HMS1	Q12398	434 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	SIR4	P11978	1358 aa		4.84	□□□□□ -1.63
PCA1	YBR295W	RPL24A	P04449	155 aa	Known RBP	4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 81.7 ms