RNA–Protein interactions for RNA: YBR265W

TSC10, Transcript of 3-ketosphinganine reductase, yeast

Gene TSC10, Length 963 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSC10	YBR265W	SAF1	P38352	637 aa		10.3	□□□□□ -0.76
TSC10	YBR265W	SHQ1	P40486	507 aa	Predicted RBP	10.3	□□□□□ -0.76
TSC10	YBR265W	YJL045W	P47052	634 aa		10.3	□□□□□ -0.76
TSC10	YBR265W	HRT3	Q12347	344 aa		10.3	□□□□□ -0.76
TSC10	YBR265W	CDC33	P07260	213 aa	Known RBP	10.29	□□□□□ -0.76
TSC10	YBR265W	MET4	P32389	672 aa		10.29	□□□□□ -0.76
TSC10	YBR265W	CDC11	P32458	415 aa		10.29	□□□□□ -0.76
TSC10	YBR265W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	10.29	□□□□□ -0.76	not detected
TSC10	YBR265W	PRM6	Q04705	352 aa		10.29	□□□□□ -0.76
TSC10	YBR265W	APE1	P14904	514 aa		10.28	□□□□□ -0.76
TSC10	YBR265W	VBA3	P25594	458 aa		10.28	□□□□□ -0.76
TSC10	YBR265W	VBA5	P36172	582 aa		10.28	□□□□□ -0.76
TSC10	YBR265W	SHM1	P37292	490 aa	Predicted RBP	10.28	□□□□□ -0.76
TSC10	YBR265W	RIM4	P38741	713 aa		10.28	□□□□□ -0.76
TSC10	YBR265W	DYS1	P38791	387 aa		10.28	□□□□□ -0.76
TSC10	YBR265W	DSE1	P40077	573 aa		10.28	□□□□□ -0.76
TSC10	YBR265W	VFA1	P40080	203 aa		10.28	□□□□□ -0.76
TSC10	YBR265W	VPS75	P53853	264 aa		10.28	□□□□□ -0.76
TSC10	YBR265W	TSR1	Q07381	788 aa	Known RBP	10.28	□□□□□ -0.76
TSC10	YBR265W	YER152C	P10356	443 aa		10.27	□□□□□ -0.77
TSC10	YBR265W	SCJ1	P25303	377 aa		10.27	□□□□□ -0.77
TSC10	YBR265W	LRE1	P25579	583 aa	Known RBP	10.27	□□□□□ -0.77
TSC10	YBR265W	KNS1	P32350	737 aa	Predicted RBP	10.27	□□□□□ -0.77
TSC10	YBR265W	MIC60	P36112	540 aa		10.27	□□□□□ -0.77
TSC10	YBR265W	YMC2	P38087	329 aa		10.27	□□□□□ -0.77
TSC10	YBR265W	SMC2	P38989	1170 aa	Known RBP	10.27	□□□□□ -0.77
TSC10	YBR265W	HFM1	P51979	1187 aa		10.27	□□□□□ -0.77
TSC10	YBR265W	MND1	P53102	219 aa		10.27	□□□□□ -0.77
TSC10	YBR265W	YNR014W	P53719	212 aa		10.27	□□□□□ -0.77
TSC10	YBR265W	SPE3	Q12074	293 aa	Known RBP	10.27	□□□□□ -0.77
TSC10	YBR265W	RRP6	Q12149	733 aa	Known RBP	10.27	□□□□□ -0.77
TSC10	YBR265W	RAD59	Q12223	238 aa		10.27	□□□□□ -0.77
TSC10	YBR265W	PHO13	P19881	312 aa		10.26	□□□□□ -0.77
TSC10	YBR265W	SAT4	P25333	603 aa	Known RBP	10.26	□□□□□ -0.77
TSC10	YBR265W	PEP7	P32609	515 aa		10.26	□□□□□ -0.77
TSC10	YBR265W	RAD55	P38953	406 aa		10.26	□□□□□ -0.77
TSC10	YBR265W	YGL036W	P53185	909 aa	Predicted RBP	10.26	□□□□□ -0.77
TSC10	YBR265W	NSE5	Q03718	556 aa		10.26	□□□□□ -0.77
TSC10	YBR265W	JIP3	O13555	125 aa		10.25	□□□□□ -0.77
TSC10	YBR265W	RPS3	P05750	240 aa	Known RBP	10.25	□□□□□ -0.77
TSC10	YBR265W	PPR1	P07272	904 aa	Predicted RBP	10.25	□□□□□ -0.77
TSC10	YBR265W	TSA1	P34760	196 aa	Known RBP	10.25	□□□□□ -0.77
TSC10	YBR265W	HXT8	P40886	569 aa		10.25	□□□□□ -0.77
TSC10	YBR265W	LSB6	P42951	607 aa		10.25	□□□□□ -0.77
TSC10	YBR265W	VPS70	P47161	811 aa		10.25	□□□□□ -0.77
TSC10	YBR265W	YNL011C	P53980	444 aa		10.25	□□□□□ -0.77
TSC10	YBR265W	SLG1	P54867	378 aa		10.25	□□□□□ -0.77
TSC10	YBR265W	GPD1	Q00055	391 aa	Known RBP	10.25	□□□□□ -0.77
TSC10	YBR265W	UME1	Q03010	460 aa		10.25	□□□□□ -0.77
TSC10	YBR265W	RRD2	Q12461	358 aa		10.25	□□□□□ -0.77
TSC10	YBR265W	VMA4	P22203	233 aa	Known RBP	10.24	□□□□□ -0.77
TSC10	YBR265W	PEX34	P25584	144 aa		10.24	□□□□□ -0.77
TSC10	YBR265W	JNM1	P36224	373 aa		10.24	□□□□□ -0.77
TSC10	YBR265W	YBR056W	P38081	501 aa		10.24	□□□□□ -0.77
TSC10	YBR265W	BTT1	P40314	149 aa	Predicted RBP	10.24	□□□□□ -0.77
TSC10	YBR265W	ZAP1	P47043	880 aa		10.24	□□□□□ -0.77
TSC10	YBR265W	HOP2	P53187	214 aa		10.24	□□□□□ -0.77
TSC10	YBR265W	APC5	Q08683	685 aa		10.24	□□□□□ -0.77
TSC10	YBR265W	TRE1	Q08919	783 aa		10.24	□□□□□ -0.77
TSC10	YBR265W	NBP2	Q12163	236 aa		10.24	□□□□□ -0.77
TSC10	YBR265W	IMG2	P25642	146 aa	Predicted RBP	10.23	□□□□□ -0.77
TSC10	YBR265W	TRZ1	P36159	838 aa	Predicted RBP	10.23	□□□□□ -0.77
TSC10	YBR265W	RTT107	P38850	1070 aa		10.23	□□□□□ -0.77
TSC10	YBR265W	GUF1	P46943	645 aa		10.23	□□□□□ -0.77
TSC10	YBR265W	PSP1	P50896	841 aa	Known RBP	10.23	□□□□□ -0.77
TSC10	YBR265W	LEE1	Q02799	301 aa	Known RBP	10.23	□□□□□ -0.77
TSC10	YBR265W	HER2	Q03557	464 aa		10.23	□□□□□ -0.77
TSC10	YBR265W	OPY2	Q06810	360 aa		10.23	□□□□□ -0.77
TSC10	YBR265W	SGO1	Q08490	590 aa		10.23	□□□□□ -0.77
TSC10	YBR265W	PHO86	P46956	311 aa		10.22	□□□□□ -0.77
TSC10	YBR265W	PFD1	P46988	109 aa		10.22	□□□□□ -0.77
TSC10	YBR265W	VTC4	P47075	721 aa		10.22	□□□□□ -0.77
TSC10	YBR265W	UTP8	P53276	713 aa	Known RBP	10.22	□□□□□ -0.77
TSC10	YBR265W	MTD1	Q02046	320 aa	Known RBP	10.22	□□□□□ -0.77
TSC10	YBR265W	ARO80	Q04052	950 aa		10.22	□□□□□ -0.77
TSC10	YBR265W	MDM38	Q08179	573 aa		10.22	□□□□□ -0.77
TSC10	YBR265W	HMI1	Q12039	706 aa		10.22	□□□□□ -0.77
TSC10	YBR265W	MST1	P07236	462 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	TUP1	P16649	713 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	BET2	P20133	325 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	PPZ1	P26570	692 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	MPE1	P35728	441 aa	Known RBP	10.21	□□□□□ -0.77
TSC10	YBR265W	YKR051W	P36142	418 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	YBL036C	P38197	257 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	SIF2	P38262	535 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	EXO5	P38289	585 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	SFB3	P38810	929 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	RPT2	P40327	437 aa	Known RBP	10.21	□□□□□ -0.77
TSC10	YBR265W	YTA12	P40341	825 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	MMM1	P41800	426 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	IES1	P43579	692 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	TAD1	P53065	400 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	CEG1	Q01159	459 aa	Predicted RBP	10.21	□□□□□ -0.77
TSC10	YBR265W	YDR344C	Q05510	147 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	FMP25	Q08023	583 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	DDC1	Q08949	612 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	ATG9	Q12142	997 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	YOL098C	Q12496	1037 aa		10.21	□□□□□ -0.77
TSC10	YBR265W	TRP2	P00899	507 aa	Known RBP	10.2	□□□□□ -0.78
TSC10	YBR265W	MTF1	P14908	341 aa	Known RBP	10.2	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms