RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	YBR259W	P38338	688 aa		5.94	□□□□□ -1.46
SLX1	YBR228W	YBP2	P53169	641 aa		5.94	□□□□□ -1.46
SLX1	YBR228W	IKI3	Q06706	1349 aa	Known RBP	5.94	□□□□□ -1.46
SLX1	YBR228W	KIN3	P22209	435 aa		5.93	□□□□□ -1.46
SLX1	YBR228W	PEX2	P32800	271 aa		5.93	□□□□□ -1.46
SLX1	YBR228W	FMP52	P40008	231 aa		5.93	□□□□□ -1.46
SLX1	YBR228W	HXT16	P47185	567 aa		5.93	□□□□□ -1.46
SLX1	YBR228W	NSE3	Q05541	303 aa		5.93	□□□□□ -1.46
SLX1	YBR228W	SGO1	Q08490	590 aa		5.93	□□□□□ -1.46
SLX1	YBR228W	HOS4	P40480	1083 aa		5.92	□□□□□ -1.46
SLX1	YBR228W	SSL2	Q00578	843 aa		5.92	□□□□□ -1.46
SLX1	YBR228W	YOR131C	Q12486	218 aa		5.92	□□□□□ -1.46
SLX1	YBR228W	TRM3	Q07527	1436 aa		5.91	□□□□□ -1.46
SLX1	YBR228W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.91	□□□□□ -1.46	not detected
SLX1	YBR228W	TEL2	P53038	688 aa		5.91	□□□□□ -1.46
SLX1	YBR228W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.91	□□□□□ -1.46	not detected
SLX1	YBR228W	MMS1	Q06211	1407 aa		5.91	□□□□□ -1.46
SLX1	YBR228W	YSP2	Q06681	1438 aa		5.91	□□□□□ -1.46
SLX1	YBR228W	DNF2	Q12675	1612 aa		5.9	□□□□□ -1.46
SLX1	YBR228W	HCA4	P20448	770 aa	Known RBP	5.9	□□□□□ -1.46
SLX1	YBR228W	PPZ2	P33329	710 aa		5.9	□□□□□ -1.46
SLX1	YBR228W	YFL052W	P43551	465 aa		5.9	□□□□□ -1.46
SLX1	YBR228W	TY4A-J	P47023	414 aa		5.9	□□□□□ -1.46
SLX1	YBR228W	NNF1	P47149	201 aa		5.9	□□□□□ -1.46
SLX1	YBR228W	PRP31	P49704	494 aa	Predicted RBP	5.9	□□□□□ -1.46
SLX1	YBR228W	YDR338C	Q05497	695 aa		5.9	□□□□□ -1.46
SLX1	YBR228W	ATG11	Q12527	1178 aa		5.9	□□□□□ -1.46
SLX1	YBR228W	ERR1	P0CX10	437 aa		5.89	□□□□□ -1.47
SLX1	YBR228W	ERR2	P0CX11	437 aa		5.89	□□□□□ -1.47
SLX1	YBR228W	UBC11	P52492	156 aa		5.89	□□□□□ -1.47
SLX1	YBR228W	VPS73	P53142	486 aa	Known RBP	5.89	□□□□□ -1.47
SLX1	YBR228W	TEX1	P53851	422 aa	Known RBP	5.89	□□□□□ -1.47
SLX1	YBR228W	SRB8	P25648	1427 aa		5.89	□□□□□ -1.47
SLX1	YBR228W	REV7	P38927	245 aa		5.88	□□□□□ -1.47
SLX1	YBR228W	SUT2	Q12286	268 aa		5.88	□□□□□ -1.47
SLX1	YBR228W	SSM4	P40318	1319 aa		5.88	□□□□□ -1.47
SLX1	YBR228W	MET6	P05694	767 aa	Known RBP	5.87	□□□□□ -1.47
SLX1	YBR228W	HIR1	P32479	840 aa		5.87	□□□□□ -1.47
SLX1	YBR228W	GDH3	P39708	457 aa		5.87	□□□□□ -1.47
SLX1	YBR228W	ORC4	P54791	529 aa		5.87	□□□□□ -1.47
SLX1	YBR228W	MVD1	P32377	396 aa	Known RBP	5.86	□□□□□ -1.47
SLX1	YBR228W	SRP40	P32583	406 aa	Predicted RBP	5.86	□□□□□ -1.47
SLX1	YBR228W	CCT3	P39077	534 aa	Known RBP	5.86	□□□□□ -1.47
SLX1	YBR228W	CHZ1	P40019	153 aa	Predicted RBP	5.86	□□□□□ -1.47
SLX1	YBR228W	CTK1	Q03957	528 aa	Known RBP	5.86	□□□□□ -1.47
SLX1	YBR228W	BNR1	P40450	1375 aa		5.85	□□□□□ -1.47
SLX1	YBR228W	RPN10	P38886	268 aa	Known RBP	5.85	□□□□□ -1.47
SLX1	YBR228W	BAP3	P41815	604 aa		5.85	□□□□□ -1.47
SLX1	YBR228W	TAH11	P47112	604 aa		5.85	□□□□□ -1.47
SLX1	YBR228W	NPY1	P53164	384 aa		5.85	□□□□□ -1.47
SLX1	YBR228W	MTL1	P53214	551 aa		5.85	□□□□□ -1.47
SLX1	YBR228W	YOL098C	Q12496	1037 aa		5.85	□□□□□ -1.47
SLX1	YBR228W	Q0142	Q9ZZW4	58 aa		5.85	□□□□□ -1.47
SLX1	YBR228W	ADE2	P21264	571 aa	Known RBP	5.84	□□□□□ -1.47
SLX1	YBR228W	DMC1	P25453	334 aa		5.84	□□□□□ -1.47
SLX1	YBR228W	MTC2	P34246	357 aa		5.84	□□□□□ -1.47
SLX1	YBR228W	APT2	P36973	181 aa		5.84	□□□□□ -1.47
SLX1	YBR228W	YHR112C	P38716	378 aa		5.84	□□□□□ -1.47
SLX1	YBR228W	RIX1	P38883	763 aa	Predicted RBP	5.84	□□□□□ -1.47
SLX1	YBR228W	YJL206C	P39529	758 aa		5.84	□□□□□ -1.47
SLX1	YBR228W	ECM1	P39715	212 aa		5.84	□□□□□ -1.47
SLX1	YBR228W	YAP1802	P53309	568 aa		5.84	□□□□□ -1.47
SLX1	YBR228W	SMX3	P54999	86 aa	Predicted RBP	5.84	□□□□□ -1.47
SLX1	YBR228W	TIM23	P32897	222 aa		5.83	□□□□□ -1.48
SLX1	YBR228W	YKL091C	P33324	310 aa	Known RBP	5.83	□□□□□ -1.48
SLX1	YBR228W	SFB3	P38810	929 aa		5.83	□□□□□ -1.48
SLX1	YBR228W	FMO1	P38866	432 aa		5.83	□□□□□ -1.48
SLX1	YBR228W	PAN2	P53010	1115 aa	Predicted RBP	5.83	□□□□□ -1.48
SLX1	YBR228W	YKL033W-A	Q86ZR7	236 aa		5.83	□□□□□ -1.48
SLX1	YBR228W	YLR149C	Q99296	730 aa		5.83	□□□□□ -1.48
SLX1	YBR228W	GCN2	P15442	1659 aa		5.82	□□□□□ -1.48
SLX1	YBR228W	YOR093C	Q12275	1648 aa		5.82	□□□□□ -1.48
SLX1	YBR228W	STO1	P34160	861 aa	Known RBP	5.82	□□□□□ -1.48
SLX1	YBR228W	MCD4	P36051	919 aa		5.82	□□□□□ -1.48
SLX1	YBR228W	DSS1	P39112	969 aa		5.82	□□□□□ -1.48
SLX1	YBR228W	BNA2	P47125	453 aa		5.82	□□□□□ -1.48
SLX1	YBR228W	PYC1	P11154	1178 aa	Known RBP	5.81	□□□□□ -1.48
SLX1	YBR228W	APL2	P36000	726 aa	Predicted RBP	5.81	□□□□□ -1.48
SLX1	YBR228W	TRZ1	P36159	838 aa	Predicted RBP	5.81	□□□□□ -1.48
SLX1	YBR228W	YIL166C	P40445	542 aa		5.81	□□□□□ -1.48
SLX1	YBR228W	NDC80	P40460	691 aa		5.81	□□□□□ -1.48
SLX1	YBR228W	MAL11	P53048	616 aa		5.81	□□□□□ -1.48
SLX1	YBR228W	NDJ1	Q12366	352 aa		5.81	□□□□□ -1.48
SLX1	YBR228W	GSY1	P23337	708 aa		5.8	□□□□□ -1.48
SLX1	YBR228W	NUP60	P39705	539 aa		5.8	□□□□□ -1.48
SLX1	YBR228W	ARG5,6	Q01217	863 aa		5.8	□□□□□ -1.48
SLX1	YBR228W	NUP188	P52593	1655 aa	Known RBP	5.79	□□□□□ -1.48
SLX1	YBR228W	CDC9	P04819	755 aa		5.79	□□□□□ -1.48
SLX1	YBR228W	TUB1	P09733	447 aa	Known RBP	5.79	□□□□□ -1.48
SLX1	YBR228W	SPO11	P23179	398 aa		5.79	□□□□□ -1.48
SLX1	YBR228W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
SLX1	YBR228W	LYS9	P38999	446 aa		5.79	□□□□□ -1.48
SLX1	YBR228W	MCM21	Q06675	368 aa		5.79	□□□□□ -1.48
SLX1	YBR228W	BUD21	Q08492	214 aa	Predicted RBP	5.79	□□□□□ -1.48
SLX1	YBR228W	SIR3	P06701	978 aa		5.78	□□□□□ -1.48
SLX1	YBR228W	YKR051W	P36142	418 aa		5.78	□□□□□ -1.48
SLX1	YBR228W	CCT7	P42943	550 aa	Known RBP	5.78	□□□□□ -1.48
SLX1	YBR228W	SNP1	Q00916	300 aa	Predicted RBP	5.78	□□□□□ -1.48
SLX1	YBR228W	RPN7	Q06103	429 aa	Known RBP	5.78	□□□□□ -1.48
SLX1	YBR228W	HRP1	Q99383	534 aa	Known RBP	5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms