RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	YML082W	Q04533	649 aa	Known RBP	6.2	□□□□□ -1.42
ATG12	YBR217W	SAM3	Q08986	587 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	GPM2	Q12008	311 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	TAF10	Q12030	206 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	RRD2	Q12461	358 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	TUP1	P16649	713 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	TKL2	P33315	681 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	KDX1	P36005	433 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	MRPL10	P36520	322 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	RGD1	P38339	666 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	RTT107	P38850	1070 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	DSE1	P40077	573 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	TAF1	P46677	1066 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	ASG7	P46993	209 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	YJL045W	P47052	634 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	VPS70	P47161	811 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	TAD1	P53065	400 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	YGL036W	P53185	909 aa	Predicted RBP	6.19	□□□□□ -1.42
ATG12	YBR217W	UME1	Q03010	460 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	FMP25	Q08023	583 aa		6.19	□□□□□ -1.42
ATG12	YBR217W	CDC33	P07260	213 aa	Known RBP	6.18	□□□□□ -1.42
ATG12	YBR217W	KEX2	P13134	814 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	SAT4	P25333	603 aa	Known RBP	6.18	□□□□□ -1.42
ATG12	YBR217W	LRE1	P25579	583 aa	Known RBP	6.18	□□□□□ -1.42
ATG12	YBR217W	PPZ1	P26570	692 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	PXL1	P36166	706 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	SDS3	P40505	327 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	ESBP6	P53918	673 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	GPD1	Q00055	391 aa	Known RBP	6.18	□□□□□ -1.42
ATG12	YBR217W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.18	□□□□□ -1.42	not detected
ATG12	YBR217W	HER2	Q03557	464 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	YLR287C	Q05881	355 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	YPR078C	Q06813	372 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	TRE1	Q08919	783 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	YOL098C	Q12496	1037 aa		6.18	□□□□□ -1.42
ATG12	YBR217W	PPR1	P07272	904 aa	Predicted RBP	6.17	□□□□□ -1.42
ATG12	YBR217W	HMG2	P12684	1045 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	PEX34	P25584	144 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	GYP6	P32806	458 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	TRZ1	P36159	838 aa	Predicted RBP	6.17	□□□□□ -1.42
ATG12	YBR217W	NOP4	P37838	685 aa	Known RBP	6.17	□□□□□ -1.42
ATG12	YBR217W	EXO5	P38289	585 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	CBR1	P38626	284 aa	Known RBP	6.17	□□□□□ -1.42
ATG12	YBR217W	DYS1	P38791	387 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	VFA1	P40080	203 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	MMM1	P41800	426 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	VPS25	P47142	202 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	MND1	P53102	219 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	YNR014W	P53719	212 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	GCN5	Q03330	439 aa		6.17	□□□□□ -1.42
ATG12	YBR217W	RRP6	Q12149	733 aa	Known RBP	6.17	□□□□□ -1.42
ATG12	YBR217W	YER152C	P10356	443 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	SPO12	P17123	173 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	PHO13	P19881	312 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	BET2	P20133	325 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	RAM1	P22007	431 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	YKL097C	P34245	136 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	JNM1	P36224	373 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	DSF2	P38213	736 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	RIM4	P38741	713 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	YEL075C	P39972	122 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	RPT2	P40327	437 aa	Known RBP	6.16	□□□□□ -1.42
ATG12	YBR217W	CDC1	P40986	491 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	IES1	P43579	692 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	PHO86	P46956	311 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	PFD1	P46988	109 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	STR2	P47164	639 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	VPS75	P53853	264 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	PML39	Q03760	334 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	RCL1	Q08096	367 aa	Predicted RBP	6.16	□□□□□ -1.42
ATG12	YBR217W	DDC1	Q08949	612 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	VPS54	Q12071	889 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	ATG9	Q12142	997 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	RAD59	Q12223	238 aa		6.16	□□□□□ -1.42
ATG12	YBR217W	JIP3	O13555	125 aa		6.15	□□□□□ -1.42
ATG12	YBR217W	TRP2	P00899	507 aa	Known RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	VMA4	P22203	233 aa	Known RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	IMG2	P25642	146 aa	Predicted RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	PDC6	P26263	563 aa	Known RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	MET4	P32389	672 aa		6.15	□□□□□ -1.42
ATG12	YBR217W	COY1	P34237	679 aa		6.15	□□□□□ -1.42
ATG12	YBR217W	TSA1	P34760	196 aa	Known RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	YKR051W	P36142	418 aa		6.15	□□□□□ -1.42
ATG12	YBR217W	YBL036C	P38197	257 aa		6.15	□□□□□ -1.42
ATG12	YBR217W	QNS1	P38795	714 aa	Known RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	SFB3	P38810	929 aa		6.15	□□□□□ -1.42
ATG12	YBR217W	AVT2	P39981	480 aa		6.15	□□□□□ -1.42
ATG12	YBR217W	SHQ1	P40486	507 aa	Predicted RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	UTP8	P53276	713 aa	Known RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	CEG1	Q01159	459 aa	Predicted RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	ECM22	Q05958	814 aa	Predicted RBP	6.15	□□□□□ -1.42
ATG12	YBR217W	YPQ1	Q12010	308 aa		6.15	□□□□□ -1.42
ATG12	YBR217W	NDJ1	Q12366	352 aa		6.15	□□□□□ -1.42
ATG12	YBR217W	RAD16	P31244	790 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	RRN6	P32786	894 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	MIC60	P36112	540 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	ABZ1	P37254	787 aa	Predicted RBP	6.14	□□□□□ -1.43
ATG12	YBR217W	YMC2	P38087	329 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	RAD55	P38953	406 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	SMC2	P38989	1170 aa	Known RBP	6.14	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms