RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W MUD1P32605 298 aaKnown RBP6.35□□□□□ -1.39
SHP1YBL058W SPT23P35210 1082 aa6.35□□□□□ -1.39
SHP1YBL058W KDX1P36005 433 aa6.35□□□□□ -1.39
SHP1YBL058W YFL034WP43564 1073 aa6.35□□□□□ -1.39
SHP1YBL058W CCM1P48237 864 aaPredicted RBP6.35□□□□□ -1.39
SHP1YBL058W IMP4P53941 290 aaKnown RBP6.35□□□□□ -1.39
SHP1YBL058W YPQ1Q12010 308 aa6.35□□□□□ -1.39
SHP1YBL058W TAF10Q12030 206 aa6.35□□□□□ -1.39
SHP1YBL058W MSH2P25847 964 aa6.34□□□□□ -1.39
SHP1YBL058W TRK2P28584 889 aa6.34□□□□□ -1.39
SHP1YBL058W SHE3P38272 425 aaKnown RBP6.34□□□□□ -1.39
SHP1YBL058W NPP2P39997 493 aa6.34□□□□□ -1.39
SHP1YBL058W IES1P43579 692 aa6.34□□□□□ -1.39
SHP1YBL058W UTP8P53276 713 aaKnown RBP6.34□□□□□ -1.39
SHP1YBL058W CWC24P53769 259 aa6.34□□□□□ -1.39
SHP1YBL058W VPS20Q04272 221 aa6.34□□□□□ -1.39
SHP1YBL058W PRM6Q04705 352 aa6.34□□□□□ -1.39
SHP1YBL058W NAT1P12945 854 aaKnown RBP6.33□□□□□ -1.4
SHP1YBL058W RDS1P25611 832 aa6.33□□□□□ -1.4
SHP1YBL058W RAD16P31244 790 aa6.33□□□□□ -1.4
SHP1YBL058W PRX1P34227 261 aaKnown RBP6.33□□□□□ -1.4
SHP1YBL058W LCB2P40970 561 aa6.33□□□□□ -1.4
SHP1YBL058W HAP5Q02516 242 aa6.33□□□□□ -1.4
SHP1YBL058W BSP1Q06604 576 aa6.33□□□□□ -1.4
SHP1YBL058W YPL216WQ08964 1102 aa6.33□□□□□ -1.4
SHP1YBL058W FLC1Q08967 793 aa6.33□□□□□ -1.4
SHP1YBL058W PIN2Q12057 282 aa6.33□□□□□ -1.4
SHP1YBL058W CHS1P08004 1131 aa6.32□□□□□ -1.4
SHP1YBL058W PPH22P23595 377 aa6.32□□□□□ -1.4
SHP1YBL058W GPI10P30777 616 aa6.32□□□□□ -1.4
SHP1YBL058W PIN4P34217 668 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
SHP1YBL058W YKR051WP36142 418 aa6.32□□□□□ -1.4
SHP1YBL058W GGA2P38817 585 aaKnown RBP6.32□□□□□ -1.4
SHP1YBL058W CHS6P40955 746 aa6.32□□□□□ -1.4
SHP1YBL058W DAS1P47005 663 aa6.32□□□□□ -1.4
SHP1YBL058W YNL011CP53980 444 aa6.32□□□□□ -1.4
SHP1YBL058W WAR1Q03631 944 aa6.32□□□□□ -1.4
SHP1YBL058W YPR027CQ12079 277 aa6.32□□□□□ -1.4
SHP1YBL058W RAS1P01119 309 aa6.31□□□□□ -1.4
SHP1YBL058W PDR1P12383 1068 aa6.31□□□□□ -1.4
SHP1YBL058W TRM1P15565 570 aaKnown RBP6.31□□□□□ -1.4
SHP1YBL058W IME1P21190 360 aa6.31□□□□□ -1.4
SHP1YBL058W CDC15P27636 974 aa6.31□□□□□ -1.4
SHP1YBL058W GCD11P32481 527 aaKnown RBP6.31□□□□□ -1.4
SHP1YBL058W TKL2P33315 681 aa6.31□□□□□ -1.4
SHP1YBL058W FTR1P40088 404 aa6.31□□□□□ -1.4
SHP1YBL058W NPA3P47122 385 aa6.31□□□□□ -1.4
SHP1YBL058W ALT1P52893 592 aa6.31□□□□□ -1.4
SHP1YBL058W DON1Q05610 365 aa6.31□□□□□ -1.4
SHP1YBL058W TCO89Q08921 799 aa6.31□□□□□ -1.4
SHP1YBL058W GPM2Q12008 311 aa6.31□□□□□ -1.4
SHP1YBL058W NDJ1Q12366 352 aa6.31□□□□□ -1.4
SHP1YBL058W STB3Q12427 513 aa6.31□□□□□ -1.4
SHP1YBL058W GAC1P28006 793 aa6.3□□□□□ -1.4
SHP1YBL058W HIR1P32479 840 aa6.3□□□□□ -1.4
SHP1YBL058W CSE1P33307 960 aa6.3□□□□□ -1.4
SHP1YBL058W CEG1Q01159 459 aaPredicted RBP6.3□□□□□ -1.4
SHP1YBL058W GCN5Q03330 439 aa6.3□□□□□ -1.4
SHP1YBL058W CEF1Q03654 590 aaPredicted RBP6.3□□□□□ -1.4
SHP1YBL058W GYL1Q04322 720 aa6.3□□□□□ -1.4
SHP1YBL058W MLH2Q07980 695 aa6.3□□□□□ -1.4
SHP1YBL058W CHS2P14180 963 aa6.29□□□□□ -1.4
SHP1YBL058W PDC6P26263 563 aaKnown RBP6.29□□□□□ -1.4
SHP1YBL058W BMH1P29311 267 aaKnown RBP6.29□□□□□ -1.4
SHP1YBL058W FRE1P32791 686 aa6.29□□□□□ -1.4
SHP1YBL058W STE5P32917 917 aa6.29□□□□□ -1.4
SHP1YBL058W SWE1P32944 819 aa6.29□□□□□ -1.4
SHP1YBL058W DOT6P40059 670 aaKnown RBP6.29□□□□□ -1.4
SHP1YBL058W SHQ1P40486 507 aaPredicted RBP6.29□□□□□ -1.4
SHP1YBL058W RMD8P43620 662 aa6.29□□□□□ -1.4
SHP1YBL058W TIM8P57744 87 aa6.29□□□□□ -1.4
SHP1YBL058W MUB1Q03162 620 aa6.29□□□□□ -1.4
SHP1YBL058W TSR1Q07381 788 aaKnown RBP6.29□□□□□ -1.4
SHP1YBL058W TLG2Q08144 397 aa6.29□□□□□ -1.4
SHP1YBL058W SLX4Q12098 748 aa6.29□□□□□ -1.4
SHP1YBL058W GIS3Q12418 502 aa6.29□□□□□ -1.4
SHP1YBL058W RPC31P17890 251 aa6.28□□□□□ -1.4
SHP1YBL058W FPR1P20081 114 aaKnown RBP6.28□□□□□ -1.4
SHP1YBL058W RRT12P25381 491 aa6.28□□□□□ -1.4
SHP1YBL058W RAD55P38953 406 aa6.28□□□□□ -1.4
SHP1YBL058W NUP60P39705 539 aa6.28□□□□□ -1.4
SHP1YBL058W KAP123P40069 1113 aaKnown RBP6.28□□□□□ -1.4
SHP1YBL058W TOS3P43637 560 aa6.28□□□□□ -1.4
SHP1YBL058W SMC3P47037 1230 aa6.28□□□□□ -1.4
SHP1YBL058W PEX14P53112 341 aa6.28□□□□□ -1.4
SHP1YBL058W NMA2P53204 395 aa6.28□□□□□ -1.4
SHP1YBL058W RPL34AP87262 121 aaPredicted RBP6.28□□□□□ -1.4
SHP1YBL058W YML082WQ04533 649 aaKnown RBP6.28□□□□□ -1.4
SHP1YBL058W RLP24Q07915 199 aaKnown RBP6.28□□□□□ -1.4
SHP1YBL058W ABP140Q08641 628 aaKnown RBP6.28□□□□□ -1.4
SHP1YBL058W MED1Q12321 566 aa6.28□□□□□ -1.4
SHP1YBL058W GAL10P04397 699 aa6.27□□□□□ -1.41
SHP1YBL058W DAL1P32375 460 aa6.27□□□□□ -1.41
SHP1YBL058W CBF2P32504 956 aa6.27□□□□□ -1.41
SHP1YBL058W SWI3P32591 825 aa6.27□□□□□ -1.41
SHP1YBL058W YKL091CP33324 310 aaKnown RBP6.27□□□□□ -1.41
SHP1YBL058W YKL023WP36103 277 aaKnown RBP6.27□□□□□ -1.41
SHP1YBL058W ATG12P38316 186 aa6.27□□□□□ -1.41
SHP1YBL058W FAA3P39002 694 aa6.27□□□□□ -1.41
SHP1YBL058W PCF11P39081 626 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms