RNA–Protein interactions for RNA: YAL019W

FUN30, Transcript of Snf2p family member with ATP-dependent chromatin remodeling activity, yeastyeast

Gene FUN30, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FUN30YAL019W SBE2P42223 864 aaKnown RBP3.2□□□□□ -1.9
FUN30YAL019W YJL107CP42947 387 aa3.2□□□□□ -1.9
FUN30YAL019W NSG2P53898 299 aa3.2□□□□□ -1.9
FUN30YAL019W PTA1Q01329 785 aaPredicted RBP3.2□□□□□ -1.9
FUN30YAL019W UTP6Q02354 440 aaKnown RBP3.2□□□□□ -1.9
FUN30YAL019W LCB5Q06147 687 aaKnown RBP3.2□□□□□ -1.9
FUN30YAL019W YPR078CQ06813 372 aa3.2□□□□□ -1.9
FUN30YAL019W ISA1Q07821 250 aaPredicted RBP3.2□□□□□ -1.9
FUN30YAL019W RUP1Q12242 671 aa3.2□□□□□ -1.9
FUN30YAL019W CEX1Q12453 761 aa3.2□□□□□ -1.9
FUN30YAL019W STE11P23561 717 aa3.19□□□□□ -1.9
FUN30YAL019W SEC14P24280 304 aaKnown RBP3.19□□□□□ -1.9
FUN30YAL019W DPH5P32469 300 aaPredicted RBP3.19□□□□□ -1.9
FUN30YAL019W SPC42P36094 363 aa3.19□□□□□ -1.9
FUN30YAL019W STT3P39007 718 aaKnown RBP3.19□□□□□ -1.9
FUN30YAL019W KEL2P50090 882 aa3.19□□□□□ -1.9
FUN30YAL019W NCS6P53088 359 aa3.19□□□□□ -1.9
FUN30YAL019W YGL039WP53183 348 aaKnown RBP3.19□□□□□ -1.9
FUN30YAL019W DIG1Q03063 452 aaKnown RBP3.19□□□□□ -1.9
FUN30YAL019W RPL24AP04449 155 aaKnown RBP3.19□□□□□ -1.9
FUN30YAL019W PPR1P07272 904 aaPredicted RBP3.19□□□□□ -1.9
FUN30YAL019W PWP1P21304 576 aaKnown RBP3.19□□□□□ -1.9
FUN30YAL019W MGT1P26188 188 aa3.19□□□□□ -1.9
FUN30YAL019W PTH2P34222 208 aa3.19□□□□□ -1.9
FUN30YAL019W CCL1P37366 393 aa3.19□□□□□ -1.9
FUN30YAL019W CST26P38226 397 aa3.19□□□□□ -1.9
FUN30YAL019W EXO5P38289 585 aa3.19□□□□□ -1.9
FUN30YAL019W PPX1P38698 397 aa3.19□□□□□ -1.9
FUN30YAL019W APE4P38821 490 aa3.19□□□□□ -1.9
FUN30YAL019W GPB2P39717 880 aa3.19□□□□□ -1.9
FUN30YAL019W VAB2P40003 282 aa3.19□□□□□ -1.9
FUN30YAL019W VFA1P40080 203 aa3.19□□□□□ -1.9
FUN30YAL019W YFL040WP43562 540 aa3.19□□□□□ -1.9
FUN30YAL019W LSB1P53281 241 aa3.19□□□□□ -1.9
FUN30YAL019W FOL1P53848 824 aa3.19□□□□□ -1.9
FUN30YAL019W GTR1Q00582 310 aa3.19□□□□□ -1.9
FUN30YAL019W ATP25Q03153 612 aa3.19□□□□□ -1.9
FUN30YAL019W DFG5Q05031 458 aa3.19□□□□□ -1.9
FUN30YAL019W FUS2Q05670 677 aa3.19□□□□□ -1.9
FUN30YAL019W YLR407WQ06070 228 aa3.19□□□□□ -1.9
FUN30YAL019W ICL2Q12031 575 aa3.19□□□□□ -1.9
FUN30YAL019W HMI1Q12039 706 aa3.19□□□□□ -1.9
FUN30YAL019W SLX4Q12098 748 aa3.19□□□□□ -1.9
FUN30YAL019W MNL2Q12205 849 aa3.19□□□□□ -1.9
FUN30YAL019W RPS9AO13516 197 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W SEM1O94742 89 aa3.18□□□□□ -1.9
FUN30YAL019W NUC1P08466 329 aa3.18□□□□□ -1.9
FUN30YAL019W CKA2P19454 339 aa3.18□□□□□ -1.9
FUN30YAL019W RNR3P21672 869 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W BUD2P33314 1104 aa3.18□□□□□ -1.9
FUN30YAL019W POA1P38218 177 aa3.18□□□□□ -1.9
FUN30YAL019W YBR062CP38239 180 aa3.18□□□□□ -1.9
FUN30YAL019W HIS2P38635 335 aa3.18□□□□□ -1.9
FUN30YAL019W PET100P38958 111 aa3.18□□□□□ -1.9
FUN30YAL019W VTC2P43585 828 aa3.18□□□□□ -1.9
FUN30YAL019W CTK3P46963 296 aaPredicted RBP3.18□□□□□ -1.9
FUN30YAL019W YJR107WP47145 328 aa3.18□□□□□ -1.9
FUN30YAL019W YGR016WP53209 190 aa3.18□□□□□ -1.9
FUN30YAL019W SQS1P53866 767 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W CWC21Q03375 135 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W SPO21Q12411 609 aa3.18□□□□□ -1.9
FUN30YAL019W TIF6Q12522 245 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W UGA4P32837 571 aa3.18□□□□□ -1.9
FUN30YAL019W OAF3P36023 863 aa3.18□□□□□ -1.9
FUN30YAL019W MCX1P38323 520 aaPredicted RBP3.18□□□□□ -1.9
FUN30YAL019W EFM2P38347 419 aa3.18□□□□□ -1.9
FUN30YAL019W NIT1P40447 199 aa3.18□□□□□ -1.9
FUN30YAL019W THI6P41835 540 aa3.18□□□□□ -1.9
FUN30YAL019W YNL247WP53852 767 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W YPL109CQ02981 657 aa3.18□□□□□ -1.9
FUN30YAL019W ECM30Q06673 1274 aa3.18□□□□□ -1.9
FUN30YAL019W AIM41Q12032 185 aa3.18□□□□□ -1.9
FUN30YAL019W APC2Q12440 853 aa3.18□□□□□ -1.9
FUN30YAL019W SEY1Q99287 776 aa3.18□□□□□ -1.9
FUN30YAL019W HEM1P09950 548 aaPredicted RBP3.18□□□□□ -1.9
FUN30YAL019W SSB1P11484 613 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W PHO13P19881 312 aa3.18□□□□□ -1.9
FUN30YAL019W AFT1P22149 690 aa3.18□□□□□ -1.9
FUN30YAL019W TRK2P28584 889 aa3.18□□□□□ -1.9
FUN30YAL019W NPL6P32832 435 aa3.18□□□□□ -1.9
FUN30YAL019W PIN4P34217 668 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
FUN30YAL019W LAS1P36146 502 aaPredicted RBP3.18□□□□□ -1.9
FUN30YAL019W MRX3P38172 270 aa3.18□□□□□ -1.9
FUN30YAL019W DSE1P40077 573 aa3.18□□□□□ -1.9
FUN30YAL019W SSB2P40150 613 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W URB2P47108 1174 aa3.18□□□□□ -1.9
FUN30YAL019W YJR079WP47126 109 aa3.18□□□□□ -1.9
FUN30YAL019W INP52P50942 1183 aa3.18□□□□□ -1.9
FUN30YAL019W YGR035CP53222 116 aa3.18□□□□□ -1.9
FUN30YAL019W LSC1P53598 329 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W ALD6P54115 500 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W CUS1Q02554 436 aaPredicted RBP3.18□□□□□ -1.9
FUN30YAL019W VTC3Q02725 835 aa3.18□□□□□ -1.9
FUN30YAL019W OYE2Q03558 400 aaKnown RBP3.18□□□□□ -1.9
FUN30YAL019W YDR278CQ05612 105 aa3.18□□□□□ -1.9
FUN30YAL019W CDC33P07260 213 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W MIP1P15801 1254 aa3.17□□□□□ -1.9
FUN30YAL019W REC107P21651 314 aa3.17□□□□□ -1.9
FUN30YAL019W PRE8P23639 250 aa3.17□□□□□ -1.9
FUN30YAL019W PUP2P32379 260 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 1244 ms