RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 SETSIPP0DME0 302 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 GOLGA1Q92805 767 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 TRERF1Q96PN7 1200 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 BATF3Q9NR55 127 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 ZC3H4Q9UPT8 1303 aaKnown RBP6.53□□□□□ -1.36
POLR2B-213ENST00000639658 H7C1W4 665 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 LIN7AO14910 233 aaPredicted RBP6.53□□□□□ -1.36
POLR2B-213ENST00000639658 U2SURPO15042 1029 aaKnown RBP6.53□□□□□ -1.36
POLR2B-213ENST00000639658 FANCGO15287 622 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 LMAN1P49257 510 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 PDE1AP54750 535 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 GBP6Q6ZN66 633 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 TTC6Q86TZ1 520 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 SLX1AQ9BQ83 275 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 RGPD1P0DJD0 1748 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 NBPF7P0C2Y1 421 aaPredicted RBP6.53□□□□□ -1.36
POLR2B-213ENST00000639658 PPP2R5AQ15172 486 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 WWC2Q6AWC2 1192 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 MORC1Q86VD1 984 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 CCDC50Q8IVM0 306 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 SDR16C5Q8N3Y7 309 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 ARHGEF1Q92888 912 aaKnown RBP6.53□□□□□ -1.36
POLR2B-213ENST00000639658 CABS1Q96KC9 395 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 PARD6BQ9BYG5 372 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 TNMDQ9H2S6 317 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 ACBD3Q9H3P7 528 aa6.53□□□□□ -1.36
POLR2B-213ENST00000639658 EXOC5O00471 708 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 IMPDH2P12268 514 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 PDCP20941 246 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 EVCP57679 992 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 KIF4BQ2VIQ3 1234 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 CDCA2Q69YH5 1023 aaPredicted RBP6.52□□□□□ -1.37
POLR2B-213ENST00000639658 APLFQ8IW19 511 aaPredicted RBP6.52□□□□□ -1.37
POLR2B-213ENST00000639658 RBM12BQ8IXT5 1001 aaKnown RBP6.52□□□□□ -1.37
POLR2B-213ENST00000639658 C1orf131Q8NDD1 294 aaKnown RBP6.52□□□□□ -1.37
POLR2B-213ENST00000639658 VEZTQ9HBM0 779 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 TOMM22Q9NS69 142 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 PALD1Q9ULE6 856 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 POLR3GO15318 223 aaPredicted RBP6.52□□□□□ -1.37
POLR2B-213ENST00000639658 ZSCAN12O43309 604 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 TBC1D8BQ0IIM8 1120 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 ARMCX5Q6P1M9 558 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 ANKARQ7Z5J8 1434 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 NBPF15Q8N660 670 aa6.52□□□□□ -1.37
POLR2B-213ENST00000639658 ZNF513Q8N8E2 541 aaPredicted RBP6.52□□□□□ -1.37
POLR2B-213ENST00000639658 ZNF483Q8TF39 744 aaPredicted RBP6.52□□□□□ -1.37
POLR2B-213ENST00000639658 IKBKBO14920 756 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 ERLIN1O75477 346 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 RASSF9O75901 435 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 FCHSD2O94868 740 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 PAX7P23759 505 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 AMOTQ4VCS5 1084 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 AP1ARQ63HQ0 302 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 TMEM139Q8IV31 216 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 C3orf20Q8ND61 904 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 TSR2Q969E8 191 aaKnown RBP6.51□□□□□ -1.37
POLR2B-213ENST00000639658 ATP6V0A4Q9HBG4 840 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 GDPD2Q9HCC8 539 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 HYPKQ9NX55 129 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 KINO60870 393 aaKnown RBP6.51□□□□□ -1.37
POLR2B-213ENST00000639658 FAM163BP0C2L3 166 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 MTHFSP49914 203 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 SMTNP53814 917 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 SCRN1Q12765 414 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 MKRN4PQ13434 485 aaPredicted RBP6.51□□□□□ -1.37
POLR2B-213ENST00000639658 SLMAPQ14BN4 828 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 RUFY3Q7L099 469 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 TMTC2Q8N394 836 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 ZKSCAN4Q969J2 545 aaPredicted RBP6.51□□□□□ -1.37
POLR2B-213ENST00000639658 ANKZF1Q9H8Y5 726 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 ZCCHC17Q9NP64 241 aaKnown RBP6.51□□□□□ -1.37
POLR2B-213ENST00000639658 SEC31AO94979 1220 aaKnown RBP6.51□□□□□ -1.37
POLR2B-213ENST00000639658 EPB41P11171 864 aaKnown RBP6.51□□□□□ -1.37
POLR2B-213ENST00000639658 FECHP22830 423 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 SKOR1P84550 965 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 SDCCAG8Q86SQ7 713 aaPredicted RBP6.51□□□□□ -1.37
POLR2B-213ENST00000639658 CEP112Q8N8E3 955 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 PDRG1Q9NUG6 133 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 ANO10Q9NW15 660 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.51□□□□□ -1.37
POLR2B-213ENST00000639658 PPP6R1Q9UPN7 881 aa6.51□□□□□ -1.37
POLR2B-213ENST00000639658 VWA3AA6NCI4 1184 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 RPS6KA3P51812 740 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 DNM1Q05193 864 aaKnown RBP6.5□□□□□ -1.37
POLR2B-213ENST00000639658 FOXR1Q6PIV2 292 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 SRGAP1Q7Z6B7 1085 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 ELOA2Q8IYF1 753 aaPredicted RBP6.5□□□□□ -1.37
POLR2B-213ENST00000639658 LSM14AQ8ND56 463 aaKnown RBP6.5□□□□□ -1.37
POLR2B-213ENST00000639658 ARMC2Q8NEN0 867 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 ENGASEQ8NFI3 743 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 ZSWIM6Q9HCJ5 1215 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 PCDHGA4Q9Y5G9 962 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 ARHGAP5Q13017 1502 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 ARHGAP6O43182 974 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 MCM3P25205 808 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 ST3GAL1Q11201 340 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 TBX2Q13207 712 aaPredicted RBP6.5□□□□□ -1.37
POLR2B-213ENST00000639658 HSP90B2PQ58FF3 399 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 DRC7Q8IY82 874 aa6.5□□□□□ -1.37
POLR2B-213ENST00000639658 MPNDQ8N594 471 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms